RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 IFNAR1P17181 557 aa16.58■□□□□ 0.24
HIF3A-202ENST00000244303 IGHMBP2P38935 993 aaKnown RBP16.58■□□□□ 0.24
HIF3A-202ENST00000244303 LAMB2P55268 1798 aa16.58■□□□□ 0.24
HIF3A-202ENST00000244303 FANCCQ00597 558 aa16.58■□□□□ 0.24
HIF3A-202ENST00000244303 NID2Q14112 1375 aa16.58■□□□□ 0.24
HIF3A-202ENST00000244303 NAA30Q147X3 362 aaPredicted RBP16.58■□□□□ 0.24
HIF3A-202ENST00000244303 CCDC150Q8NCX0 1101 aa16.58■□□□□ 0.24
HIF3A-202ENST00000244303 RTL9Q8NET4 1388 aa16.57■□□□□ 0.24
HIF3A-202ENST00000244303 LONRF3Q496Y0 759 aa16.57■□□□□ 0.24
HIF3A-202ENST00000244303 METTL16Q86W50 562 aaKnown RBP16.57■□□□□ 0.24
HIF3A-202ENST00000244303 NOSTRINQ8IVI9 506 aa16.57■□□□□ 0.24
HIF3A-202ENST00000244303 LINC00116Q8NCU8 138 aa16.57■□□□□ 0.24
HIF3A-202ENST00000244303 STAG1Q8WVM7 1258 aa16.57■□□□□ 0.24
HIF3A-202ENST00000244303 ZNF652Q9Y2D9 606 aa16.57■□□□□ 0.24
HIF3A-202ENST00000244303 PNPLA7Q6ZV29 1317 aa16.57■□□□□ 0.24
HIF3A-202ENST00000244303 BTBD18B2RXH4 712 aa16.57■□□□□ 0.24
HIF3A-202ENST00000244303 WTAPQ15007 396 aa16.57■□□□□ 0.24
HIF3A-202ENST00000244303 MIGA1Q8NAN2 632 aa16.57■□□□□ 0.24
HIF3A-202ENST00000244303 WASF1Q92558 559 aa16.57■□□□□ 0.24
HIF3A-202ENST00000244303 NACAP1Q9BZK3 213 aa16.57■□□□□ 0.24
HIF3A-202ENST00000244303 KCNJ14Q9UNX9 436 aa16.57■□□□□ 0.24
HIF3A-202ENST00000244303 MMP1P03956 469 aa16.56■□□□□ 0.24
HIF3A-202ENST00000244303 GNAT2P19087 354 aa16.56■□□□□ 0.24
HIF3A-202ENST00000244303 SFPQP23246 707 aaKnown RBP eCLIP16.56■□□□□ 0.24
HIF3A-202ENST00000244303 RTN1Q16799 776 aa16.56■□□□□ 0.24
HIF3A-202ENST00000244303 NGLY1Q96IV0 654 aa16.56■□□□□ 0.24
HIF3A-202ENST00000244303 BCL11BQ9C0K0 894 aaPredicted RBP16.56■□□□□ 0.24
HIF3A-202ENST00000244303 KCNH3Q9ULD8 1083 aa16.56■□□□□ 0.24
HIF3A-202ENST00000244303 SPDYE4A6NLX3 237 aa16.56■□□□□ 0.24
HIF3A-202ENST00000244303 ZSCAN20P17040 1043 aaPredicted RBP16.56■□□□□ 0.24
HIF3A-202ENST00000244303 MYL5Q02045 173 aa16.56■□□□□ 0.24
HIF3A-202ENST00000244303 SART3Q15020 963 aaKnown RBP16.56■□□□□ 0.24
HIF3A-202ENST00000244303 SPECC1Q5M775 1068 aa16.56■□□□□ 0.24
HIF3A-202ENST00000244303 UTP14CQ5TAP6 766 aaKnown RBP16.56■□□□□ 0.24
HIF3A-202ENST00000244303 E4F1Q66K89 784 aaPredicted RBP16.56■□□□□ 0.24
HIF3A-202ENST00000244303 CLEC4GQ6UXB4 293 aa16.56■□□□□ 0.24
HIF3A-202ENST00000244303 KRBA2Q6ZNG9 492 aa16.56■□□□□ 0.24
HIF3A-202ENST00000244303 DIS3L2Q8IYB7 885 aaKnown RBP16.56■□□□□ 0.24
HIF3A-202ENST00000244303 CMTR1Q8N1G2 835 aaKnown RBP16.56■□□□□ 0.24
HIF3A-202ENST00000244303 CCDC82Q8N4S0 544 aa16.56■□□□□ 0.24
HIF3A-202ENST00000244303 CNNM3Q8NE01 707 aa16.56■□□□□ 0.24
HIF3A-202ENST00000244303 C8orf37Q96NL8 207 aa16.56■□□□□ 0.24
HIF3A-202ENST00000244303 COL4A1P02462 1669 aa16.55■□□□□ 0.24
HIF3A-202ENST00000244303 TOB1P50616 345 aaPredicted RBP16.55■□□□□ 0.24
HIF3A-202ENST00000244303 KCNQ4P56696 695 aa16.55■□□□□ 0.24
HIF3A-202ENST00000244303 VPS72Q15906 364 aa16.55■□□□□ 0.24
HIF3A-202ENST00000244303 FOXP4Q8IVH2 680 aaPredicted RBP16.55■□□□□ 0.24
HIF3A-202ENST00000244303 TRIM22Q8IYM9 498 aa16.55■□□□□ 0.24
HIF3A-202ENST00000244303 KRI1Q8N9T8 703 aaKnown RBP16.55■□□□□ 0.24
HIF3A-202ENST00000244303 LRP2BPQ9P2M1 347 aa16.55■□□□□ 0.24
HIF3A-202ENST00000244303 MYH2Q9UKX2 1941 aa16.55■□□□□ 0.24
HIF3A-202ENST00000244303 ERICH2A1L162 156 aa16.54■□□□□ 0.24
HIF3A-202ENST00000244303 SAFBQ15424 915 aaKnown RBP eCLIP16.54■□□□□ 0.24
HIF3A-202ENST00000244303 DPF2Q92785 391 aa16.54■□□□□ 0.24
HIF3A-202ENST00000244303 COL5A3P25940 1745 aaPredicted RBP16.54■□□□□ 0.24
HIF3A-202ENST00000244303 FOXN1O15353 648 aa16.54■□□□□ 0.24
HIF3A-202ENST00000244303 CHRNDQ07001 517 aa16.54■□□□□ 0.24
HIF3A-202ENST00000244303 IQSEC3Q9UPP2 1182 aaPredicted RBP16.54■□□□□ 0.24
HIF3A-202ENST00000244303 PCDHA5Q9Y5H7 936 aa16.54■□□□□ 0.24
HIF3A-202ENST00000244303 A0A1B0GUL6 1792 aa16.54■□□□□ 0.24
HIF3A-202ENST00000244303 BAZ2AQ9UIF9 1905 aaKnown RBP16.54■□□□□ 0.24
HIF3A-202ENST00000244303 TAF1P21675 1872 aa16.54■□□□□ 0.24
HIF3A-202ENST00000244303 BCL9LQ86UU0 1499 aa16.53■□□□□ 0.24
HIF3A-202ENST00000244303 CASZ1Q86V15 1759 aa16.53■□□□□ 0.24
HIF3A-202ENST00000244303 UBASH3AP57075 661 aa16.53■□□□□ 0.24
HIF3A-202ENST00000244303 GRIN1Q05586 938 aa16.53■□□□□ 0.24
HIF3A-202ENST00000244303 ERFEQ4G0M1 354 aa16.53■□□□□ 0.24
HIF3A-202ENST00000244303 OLFM4Q6UX06 510 aa16.53■□□□□ 0.24
HIF3A-202ENST00000244303 KIF18AQ8NI77 898 aa16.53■□□□□ 0.24
HIF3A-202ENST00000244303 PPP1R13BQ96KQ4 1090 aa16.53■□□□□ 0.24
HIF3A-202ENST00000244303 DEXIO95424 95 aa16.53■□□□□ 0.24
HIF3A-202ENST00000244303 SERPINC1P01008 464 aa16.53■□□□□ 0.24
HIF3A-202ENST00000244303 PPARAQ07869 468 aa16.53■□□□□ 0.24
HIF3A-202ENST00000244303 PTF1AQ7RTS3 328 aa16.53■□□□□ 0.24
HIF3A-202ENST00000244303 ADGRA1Q86SQ6 560 aa16.53■□□□□ 0.24
HIF3A-202ENST00000244303 CRACR2BQ8N4Y2 399 aaPredicted RBP16.53■□□□□ 0.24
HIF3A-202ENST00000244303 NUP133Q8WUM0 1156 aa16.53■□□□□ 0.24
HIF3A-202ENST00000244303 ZNF215Q9UL58 517 aaPredicted RBP16.53■□□□□ 0.24
HIF3A-202ENST00000244303 PSDA5PKW4 1024 aaPredicted RBP16.52■□□□□ 0.24
HIF3A-202ENST00000244303 KIF2AO00139 706 aaPredicted RBP16.52■□□□□ 0.24
HIF3A-202ENST00000244303 BMP6P22004 513 aa16.52■□□□□ 0.24
HIF3A-202ENST00000244303 NR5A1Q13285 461 aa16.52■□□□□ 0.24
HIF3A-202ENST00000244303 ZNF654Q8IZM8 581 aa16.52■□□□□ 0.24
HIF3A-202ENST00000244303 SDR42E1Q8WUS8 393 aa16.52■□□□□ 0.24
HIF3A-202ENST00000244303 CDC5LQ99459 802 aaKnown RBP16.52■□□□□ 0.24
HIF3A-202ENST00000244303 FOXP1Q9H334 677 aaPredicted RBP16.52■□□□□ 0.24
HIF3A-202ENST00000244303 FBXO2Q9UK22 296 aaPredicted RBP16.52■□□□□ 0.24
HIF3A-202ENST00000244303 CYP7A1P22680 504 aa16.52■□□□□ 0.23
HIF3A-202ENST00000244303 KCNJ6P48051 423 aa16.52■□□□□ 0.23
HIF3A-202ENST00000244303 MDM2Q00987 491 aaPredicted RBP16.52■□□□□ 0.23
HIF3A-202ENST00000244303 DHX8Q14562 1220 aaKnown RBP16.52■□□□□ 0.23
HIF3A-202ENST00000244303 CFAP100Q494V2 611 aa16.52■□□□□ 0.23
HIF3A-202ENST00000244303 RILPL1Q5EBL4 403 aa16.52■□□□□ 0.23
HIF3A-202ENST00000244303 C3orf67Q6ZVT6 689 aa16.52■□□□□ 0.23
HIF3A-202ENST00000244303 TMTC2Q8N394 836 aa16.52■□□□□ 0.23
HIF3A-202ENST00000244303 FANCBQ8NB91 859 aa16.52■□□□□ 0.23
HIF3A-202ENST00000244303 GTPBP4Q9BZE4 634 aaKnown RBP16.52■□□□□ 0.23
HIF3A-202ENST00000244303 RNF41Q9H4P4 317 aaPredicted RBP16.52■□□□□ 0.23
HIF3A-202ENST00000244303 FANCLQ9NW38 375 aa16.52■□□□□ 0.23
HIF3A-202ENST00000244303 PCDHB6Q9Y5E3 794 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms