RNA–Protein interactions for RNA: ENST00000238633.6

NPC2-201, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene NPC2, Length 796 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-201ENST00000238633 LRRC26Q2I0M4 334 aa11.74□□□□□ -0.53
NPC2-201ENST00000238633 MAP3K21Q5TCX8 1036 aa11.74□□□□□ -0.53
NPC2-201ENST00000238633 TRIB2Q92519 343 aa11.74□□□□□ -0.53
NPC2-201ENST00000238633 FAM161BQ96MY7 647 aa11.74□□□□□ -0.53
NPC2-201ENST00000238633 HMX1Q9NP08 348 aaPredicted RBP11.74□□□□□ -0.53
NPC2-201ENST00000238633 UTYO14607 1347 aa11.74□□□□□ -0.53
NPC2-201ENST00000238633 KIF16BQ96L93 1317 aa11.74□□□□□ -0.53
NPC2-201ENST00000238633 COL2A1P02458 1487 aaPredicted RBP11.74□□□□□ -0.53
NPC2-201ENST00000238633 DDTLA6NHG4 134 aaPredicted RBP11.73□□□□□ -0.53
NPC2-201ENST00000238633 RGS3P49796 1198 aa11.73□□□□□ -0.53
NPC2-201ENST00000238633 EXOSC9Q06265 439 aaKnown RBP11.73□□□□□ -0.53
NPC2-201ENST00000238633 RFX7Q2KHR2 1363 aa11.73□□□□□ -0.53
NPC2-201ENST00000238633 DOCK3Q8IZD9 2030 aa11.73□□□□□ -0.53
NPC2-201ENST00000238633 WDR66Q8TBY9 1149 aa11.73□□□□□ -0.53
NPC2-201ENST00000238633 IDI2Q9BXS1 227 aa11.73□□□□□ -0.53
NPC2-201ENST00000238633 TSPYL2Q9H2G4 693 aaPredicted RBP11.73□□□□□ -0.53
NPC2-201ENST00000238633 PEX10O60683 326 aa11.72□□□□□ -0.53
NPC2-201ENST00000238633 CTNND1O60716 968 aaKnown RBP11.72□□□□□ -0.53
NPC2-201ENST00000238633 EVX2Q03828 476 aa11.72□□□□□ -0.53
NPC2-201ENST00000238633 PUM3Q15397 648 aaKnown RBP11.72□□□□□ -0.53
NPC2-201ENST00000238633 CCDC184Q52MB2 194 aa11.72□□□□□ -0.53
NPC2-201ENST00000238633 LHX8Q68G74 356 aa11.72□□□□□ -0.53
NPC2-201ENST00000238633 SRCIN1Q9C0H9 1055 aa11.72□□□□□ -0.53
NPC2-201ENST00000238633 DDX4Q9NQI0 724 aaKnown RBP11.72□□□□□ -0.53
NPC2-201ENST00000238633 ENTPD3O75355 529 aa11.71□□□□□ -0.53
NPC2-201ENST00000238633 SLC4A10Q6U841 1118 aa11.71□□□□□ -0.53
NPC2-201ENST00000238633 CDX2Q99626 313 aaPredicted RBP11.71□□□□□ -0.53
NPC2-201ENST00000238633 LRRFIP2Q9Y608 721 aaKnown RBP11.71□□□□□ -0.53
NPC2-201ENST00000238633 IFIT1P09914 478 aaKnown RBP11.7□□□□□ -0.54
NPC2-201ENST00000238633 CYP2B6P20813 491 aa11.7□□□□□ -0.54
NPC2-201ENST00000238633 RFX5P48382 616 aaPredicted RBP11.7□□□□□ -0.54
NPC2-201ENST00000238633 CACNB2Q08289 660 aaPredicted RBP11.7□□□□□ -0.54
NPC2-201ENST00000238633 RRP1BQ14684 758 aaKnown RBP11.7□□□□□ -0.54
NPC2-201ENST00000238633 PROCA1Q8NCQ7 364 aaPredicted RBP11.7□□□□□ -0.54
NPC2-201ENST00000238633 ASCC2Q9H1I8 757 aaPredicted RBP11.7□□□□□ -0.54
NPC2-201ENST00000238633 RTN4Q9NQC3 1192 aaKnown RBP11.7□□□□□ -0.54
NPC2-201ENST00000238633 CIZ1Q9ULV3 898 aaPredicted RBP11.7□□□□□ -0.54
NPC2-201ENST00000238633 DDX60LQ5H9U9 1706 aaKnown RBP11.69□□□□□ -0.54
NPC2-201ENST00000238633 GAKO14976 1311 aa11.69□□□□□ -0.54
NPC2-201ENST00000238633 BDP1A6H8Y1 2624 aa11.69□□□□□ -0.54
NPC2-201ENST00000238633 FAM196BA6NMK8 535 aa11.69□□□□□ -0.54
NPC2-201ENST00000238633 LDHBP07195 334 aaKnown RBP11.69□□□□□ -0.54
NPC2-201ENST00000238633 CCND3P30281 292 aaPredicted RBP11.69□□□□□ -0.54
NPC2-201ENST00000238633 GCLCP48506 637 aaPredicted RBP11.69□□□□□ -0.54
NPC2-201ENST00000238633 SPP2Q13103 211 aa11.69□□□□□ -0.54
NPC2-201ENST00000238633 POTEEQ6S8J3 1075 aa11.69□□□□□ -0.54
NPC2-201ENST00000238633 ATG9AQ7Z3C6 839 aa11.69□□□□□ -0.54
NPC2-201ENST00000238633 LPIN2Q92539 896 aa11.69□□□□□ -0.54
NPC2-201ENST00000238633 USP6NLQ92738 828 aa11.69□□□□□ -0.54
NPC2-201ENST00000238633 SEMA6BQ9H3T3 888 aa11.69□□□□□ -0.54
NPC2-201ENST00000238633 TXNRD2Q9NNW7 524 aa11.69□□□□□ -0.54
NPC2-201ENST00000238633 MORF4L1Q9UBU8 362 aa11.69□□□□□ -0.54
NPC2-201ENST00000238633 SALL1Q9NSC2 1324 aa11.68□□□□□ -0.54
NPC2-201ENST00000238633 XRCC5P13010 732 aaKnown RBP11.68□□□□□ -0.54
NPC2-201ENST00000238633 HMGCS2P54868 508 aa11.68□□□□□ -0.54
NPC2-201ENST00000238633 CCL14Q16627 93 aa11.68□□□□□ -0.54
NPC2-201ENST00000238633 ZSCAN29Q8IWY8 852 aaPredicted RBP11.68□□□□□ -0.54
NPC2-201ENST00000238633 MAFAQ8NHW3 353 aaPredicted RBP11.68□□□□□ -0.54
NPC2-201ENST00000238633 PNMA3Q9UL41 463 aa11.68□□□□□ -0.54
NPC2-201ENST00000238633 EYA2O00167 538 aa11.67□□□□□ -0.54
NPC2-201ENST00000238633 TBC1D12O60347 775 aa11.67□□□□□ -0.54
NPC2-201ENST00000238633 SLC5A1P13866 664 aa11.67□□□□□ -0.54
NPC2-201ENST00000238633 SH3D19Q5HYK7 790 aa11.67□□□□□ -0.54
NPC2-201ENST00000238633 ZNF280CQ8ND82 737 aa11.67□□□□□ -0.54
NPC2-201ENST00000238633 ZNF384Q8TF68 577 aa11.67□□□□□ -0.54
NPC2-201ENST00000238633 P2RX7Q99572 595 aaKnown RBP11.67□□□□□ -0.54
NPC2-201ENST00000238633 TTYH1Q9H313 450 aaPredicted RBP11.67□□□□□ -0.54
NPC2-201ENST00000238633 RAPGEFL1Q9UHV5 662 aa11.67□□□□□ -0.54
NPC2-201ENST00000238633 PHIPQ8WWQ0 1821 aa11.67□□□□□ -0.54
NPC2-201ENST00000238633 PLXNB2O15031 1838 aa11.66□□□□□ -0.54
NPC2-201ENST00000238633 ZEB1P37275 1124 aaPredicted RBP11.66□□□□□ -0.54
NPC2-201ENST00000238633 PHKA1P46020 1223 aa11.66□□□□□ -0.54
NPC2-201ENST00000238633 RHBDL3P58872 404 aa11.66□□□□□ -0.54
NPC2-201ENST00000238633 PICALMQ13492 652 aa11.66□□□□□ -0.54
NPC2-201ENST00000238633 Q3C1V9 767 aa11.66□□□□□ -0.54
NPC2-201ENST00000238633 ZNF697Q5TEC3 545 aa11.66□□□□□ -0.54
NPC2-201ENST00000238633 MYLIPQ8WY64 445 aa11.66□□□□□ -0.54
NPC2-201ENST00000238633 FAM163AQ96GL9 167 aaPredicted RBP11.66□□□□□ -0.54
NPC2-201ENST00000238633 USP44Q9H0E7 712 aa11.66□□□□□ -0.54
NPC2-201ENST00000238633 RBPJLQ9UBG7 517 aa11.66□□□□□ -0.54
NPC2-201ENST00000238633 PTPRFP10586 1907 aa11.66□□□□□ -0.54
NPC2-201ENST00000238633 COL9A1P20849 921 aa11.65□□□□□ -0.54
NPC2-201ENST00000238633 BTDP43251 543 aa11.65□□□□□ -0.54
NPC2-201ENST00000238633 JAG1P78504 1218 aa11.65□□□□□ -0.54
NPC2-201ENST00000238633 SHHQ15465 462 aa11.65□□□□□ -0.54
NPC2-201ENST00000238633 C9orf50Q5SZB4 431 aa11.65□□□□□ -0.54
NPC2-201ENST00000238633 MORN1Q5T089 497 aa11.65□□□□□ -0.54
NPC2-201ENST00000238633 WDR63Q8IWG1 891 aa11.65□□□□□ -0.54
NPC2-201ENST00000238633 NUDT12Q9BQG2 462 aa11.65□□□□□ -0.54
NPC2-201ENST00000238633 PORCNQ9H237 461 aa11.65□□□□□ -0.54
NPC2-201ENST00000238633 ZKSCAN1P17029 563 aaPredicted RBP11.64□□□□□ -0.55
NPC2-201ENST00000238633 ADORA1P30542 326 aa11.64□□□□□ -0.55
NPC2-201ENST00000238633 CAP2P40123 477 aa11.64□□□□□ -0.55
NPC2-201ENST00000238633 PABPC4Q13310 644 aaKnown RBP eCLIP11.64□□□□□ -0.553e-7■■■■■ 35.2
NPC2-201ENST00000238633 ZNF579Q8NAF0 562 aaKnown RBP11.64□□□□□ -0.55
NPC2-201ENST00000238633 SENP6Q9GZR1 1112 aaPredicted RBP11.64□□□□□ -0.55
NPC2-201ENST00000238633 OSBPL5Q9H0X9 879 aaPredicted RBP11.64□□□□□ -0.55
NPC2-201ENST00000238633 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.64□□□□□ -0.55
NPC2-201ENST00000238633 FLRT1Q9NZU1 646 aa11.64□□□□□ -0.55
NPC2-201ENST00000238633 DENND2AQ9ULE3 1009 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms