RNA–Protein interactions for RNA: ENST00000221847.5

EBI3-201, Transcript of Epstein-Barr virus induced 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBI3, Length 1,186 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBI3-201ENST00000221847 OPTNQ96CV9 577 aa19.28■□□□□ 0.68
EBI3-201ENST00000221847 CCDC136Q96JN2 1154 aa19.28■□□□□ 0.68
EBI3-201ENST00000221847 DCP1AQ9NPI6 582 aaPredicted RBP19.28■□□□□ 0.68
EBI3-201ENST00000221847 WBP1LQ9NX94 342 aa19.28■□□□□ 0.68
EBI3-201ENST00000221847 SLC4A4Q9Y6R1 1079 aa19.28■□□□□ 0.68
EBI3-201ENST00000221847 MYH1P12882 1939 aa19.27■□□□□ 0.68
EBI3-201ENST00000221847 HLA-DOAP06340 250 aa19.27■□□□□ 0.68
EBI3-201ENST00000221847 HSPA1AP0DMV8 641 aaKnown RBP19.27■□□□□ 0.68
EBI3-201ENST00000221847 HSPA1BP0DMV9 641 aaKnown RBP19.27■□□□□ 0.68
EBI3-201ENST00000221847 FOXP4Q8IVH2 680 aaPredicted RBP19.27■□□□□ 0.68
EBI3-201ENST00000221847 CRACR2BQ8N4Y2 399 aaPredicted RBP19.27■□□□□ 0.68
EBI3-201ENST00000221847 MCM9Q9NXL9 1143 aa19.27■□□□□ 0.68
EBI3-201ENST00000221847 HERC5Q9UII4 1024 aaKnown RBP19.27■□□□□ 0.68
EBI3-201ENST00000221847 SIPA1L1O43166 1804 aa19.26■□□□□ 0.67
EBI3-201ENST00000221847 SPDYE5A6NIY4 337 aa19.26■□□□□ 0.67
EBI3-201ENST00000221847 GPAA1O43292 621 aa19.26■□□□□ 0.67
EBI3-201ENST00000221847 POLR3DP05423 398 aaPredicted RBP19.26■□□□□ 0.67
EBI3-201ENST00000221847 ZBTB48P10074 688 aaPredicted RBP19.26■□□□□ 0.67
EBI3-201ENST00000221847 NOL9Q5SY16 702 aaKnown RBP19.26■□□□□ 0.67
EBI3-201ENST00000221847 METTL16Q86W50 562 aaKnown RBP19.26■□□□□ 0.67
EBI3-201ENST00000221847 DNAJC18Q9H819 358 aa19.26■□□□□ 0.67
EBI3-201ENST00000221847 ATP8A2Q9NTI2 1148 aa19.26■□□□□ 0.67
EBI3-201ENST00000221847 CYP2D6P10635 497 aa19.25■□□□□ 0.67
EBI3-201ENST00000221847 PLCD1P51178 756 aa19.25■□□□□ 0.67
EBI3-201ENST00000221847 EVX2Q03828 476 aa19.25■□□□□ 0.67
EBI3-201ENST00000221847 RRP1BQ14684 758 aaKnown RBP19.25■□□□□ 0.67
EBI3-201ENST00000221847 TTC6Q86TZ1 520 aa19.25■□□□□ 0.67
EBI3-201ENST00000221847 ERO1BQ86YB8 467 aa19.25■□□□□ 0.67
EBI3-201ENST00000221847 OTUD5Q96G74 571 aa19.25■□□□□ 0.67
EBI3-201ENST00000221847 NAV1Q8NEY1 1877 aa19.24■□□□□ 0.67
EBI3-201ENST00000221847 GSG1L2A8MUP6 293 aa19.24■□□□□ 0.67
EBI3-201ENST00000221847 CTNND1O60716 968 aaKnown RBP19.24■□□□□ 0.67
EBI3-201ENST00000221847 TTC22Q5TAA0 569 aa19.24■□□□□ 0.67
EBI3-201ENST00000221847 SCYL3Q8IZE3 742 aa19.24■□□□□ 0.67
EBI3-201ENST00000221847 TRIM34Q9BYJ4 488 aa19.24■□□□□ 0.67
EBI3-201ENST00000221847 DDX60LQ5H9U9 1706 aaKnown RBP19.23■□□□□ 0.67
EBI3-201ENST00000221847 CYP2D7A0A087X1C5 515 aa19.23■□□□□ 0.67
EBI3-201ENST00000221847 GSPT1P15170 499 aaKnown RBP19.23■□□□□ 0.67
EBI3-201ENST00000221847 CCDC129Q6ZRS4 1044 aa19.23■□□□□ 0.67
EBI3-201ENST00000221847 SKAP1Q86WV1 359 aa19.23■□□□□ 0.67
EBI3-201ENST00000221847 TICAM2Q86XR7 235 aa19.23■□□□□ 0.67
EBI3-201ENST00000221847 REM2Q8IYK8 340 aaPredicted RBP19.23■□□□□ 0.67
EBI3-201ENST00000221847 FAM227BQ96M60 508 aa19.23■□□□□ 0.67
EBI3-201ENST00000221847 BEGAINQ9BUH8 593 aa19.23■□□□□ 0.67
EBI3-201ENST00000221847 EHD4Q9H223 541 aa19.23■□□□□ 0.67
EBI3-201ENST00000221847 PICK1Q9NRD5 415 aa19.23■□□□□ 0.67
EBI3-201ENST00000221847 SERPINB13Q9UIV8 391 aa19.23■□□□□ 0.67
EBI3-201ENST00000221847 A0A0D9SFI3 127 aa19.22■□□□□ 0.67
EBI3-201ENST00000221847 MANSC4A6NHS7 340 aaPredicted RBP19.22■□□□□ 0.67
EBI3-201ENST00000221847 USP17L12C9JPN9 530 aa19.22■□□□□ 0.67
EBI3-201ENST00000221847 USP17L21D6R901 530 aa19.22■□□□□ 0.67
EBI3-201ENST00000221847 FOXN1O15353 648 aa19.22■□□□□ 0.67
EBI3-201ENST00000221847 SDSP20132 328 aa19.22■□□□□ 0.67
EBI3-201ENST00000221847 CAP2P40123 477 aa19.22■□□□□ 0.67
EBI3-201ENST00000221847 TM4SF4P48230 202 aa19.22■□□□□ 0.67
EBI3-201ENST00000221847 PPATQ06203 517 aa19.22■□□□□ 0.67
EBI3-201ENST00000221847 PPIL2Q13356 520 aa19.22■□□□□ 0.67
EBI3-201ENST00000221847 DDRGK1Q96HY6 314 aa19.22■□□□□ 0.67
EBI3-201ENST00000221847 HELLSQ9NRZ9 838 aa19.22■□□□□ 0.67
EBI3-201ENST00000221847 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.22■□□□□ 0.67
EBI3-201ENST00000221847 BAZ2AQ9UIF9 1905 aaKnown RBP19.21■□□□□ 0.67
EBI3-201ENST00000221847 SMIM22K7EJ46 135 aa19.21■□□□□ 0.67
EBI3-201ENST00000221847 IRF6O14896 467 aa19.21■□□□□ 0.67
EBI3-201ENST00000221847 APPP05067 770 aa19.21■□□□□ 0.67
EBI3-201ENST00000221847 PTPRAP18433 802 aa19.21■□□□□ 0.67
EBI3-201ENST00000221847 GNAT2P19087 354 aa19.21■□□□□ 0.67
EBI3-201ENST00000221847 SREBF2Q12772 1141 aa19.21■□□□□ 0.67
EBI3-201ENST00000221847 NMIQ13287 307 aaPredicted RBP19.21■□□□□ 0.67
EBI3-201ENST00000221847 C12orf60Q5U649 245 aa19.21■□□□□ 0.67
EBI3-201ENST00000221847 CTR9Q6PD62 1173 aa19.21■□□□□ 0.67
EBI3-201ENST00000221847 CCDC84Q86UT8 332 aaPredicted RBP19.21■□□□□ 0.67
EBI3-201ENST00000221847 MS4A4AQ96JQ5 239 aa19.21■□□□□ 0.67
EBI3-201ENST00000221847 ZHX2Q9Y6X8 837 aa19.21■□□□□ 0.67
EBI3-201ENST00000221847 PATL2C9JE40 543 aaKnown RBP19.2■□□□□ 0.66
EBI3-201ENST00000221847 GTF2A2P52657 109 aa19.2■□□□□ 0.66
EBI3-201ENST00000221847 JAG1P78504 1218 aa19.2■□□□□ 0.66
EBI3-201ENST00000221847 GABPAQ06546 454 aa19.2■□□□□ 0.66
EBI3-201ENST00000221847 SHROOM1Q2M3G4 852 aaPredicted RBP19.2■□□□□ 0.66
EBI3-201ENST00000221847 ERICH6BQ5W0A0 696 aa19.2■□□□□ 0.66
EBI3-201ENST00000221847 GIMAP6Q6P9H5 292 aa19.2■□□□□ 0.66
EBI3-201ENST00000221847 DYNLL2Q96FJ2 89 aa19.2■□□□□ 0.66
EBI3-201ENST00000221847 EPB41L4AQ9HCS5 686 aaPredicted RBP19.2■□□□□ 0.66
EBI3-201ENST00000221847 RNF186Q9NXI6 227 aa19.2■□□□□ 0.66
EBI3-201ENST00000221847 TSKSQ9UJT2 592 aa19.2■□□□□ 0.66
EBI3-201ENST00000221847 GDF11O95390 407 aa19.19■□□□□ 0.66
EBI3-201ENST00000221847 SHMT1P34896 483 aa19.19■□□□□ 0.66
EBI3-201ENST00000221847 INHBEP58166 350 aa19.19■□□□□ 0.66
EBI3-201ENST00000221847 MCMDC2Q4G0Z9 681 aa19.19■□□□□ 0.66
EBI3-201ENST00000221847 TATDN1Q6P1N9 297 aa19.19■□□□□ 0.66
EBI3-201ENST00000221847 AMOTL1Q8IY63 956 aa19.19■□□□□ 0.66
EBI3-201ENST00000221847 SLC44A5Q8NCS7 719 aa19.19■□□□□ 0.66
EBI3-201ENST00000221847 BRI3BPQ8WY22 251 aa19.19■□□□□ 0.66
EBI3-201ENST00000221847 PPP4R2Q9NY27 417 aa19.19■□□□□ 0.66
EBI3-201ENST00000221847 DOCK1Q14185 1865 aa19.19■□□□□ 0.66
EBI3-201ENST00000221847 CCL15-CCL14A0A0B4J2E2 113 aa19.18■□□□□ 0.66
EBI3-201ENST00000221847 TESPA1A2RU30 521 aaPredicted RBP19.18■□□□□ 0.66
EBI3-201ENST00000221847 TRPA1O75762 1119 aa19.18■□□□□ 0.66
EBI3-201ENST00000221847 SNAPC2Q13487 334 aa19.18■□□□□ 0.66
EBI3-201ENST00000221847 CCL15Q16663 113 aa19.18■□□□□ 0.66
EBI3-201ENST00000221847 IFNL1Q8IU54 200 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms