RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 MAP7D1Q3KQU3 841 aa15.21■□□□□ 0.03
TGFBR3-201ENST00000212355 ZNF790Q6PG37 636 aa15.21■□□□□ 0.03
TGFBR3-201ENST00000212355 FNBP1Q96RU3 617 aa15.21■□□□□ 0.03
TGFBR3-201ENST00000212355 FLT4P35916 1363 aa15.21■□□□□ 0.03
TGFBR3-201ENST00000212355 BUB1O43683 1085 aa15.21■□□□□ 0.03
TGFBR3-201ENST00000212355 PAK1Q13153 545 aa15.21■□□□□ 0.03
TGFBR3-201ENST00000212355 CNGA4Q8IV77 575 aa15.21■□□□□ 0.03
TGFBR3-201ENST00000212355 CLIC6Q96NY7 704 aa15.21■□□□□ 0.03
TGFBR3-201ENST00000212355 DAAM2Q86T65 1068 aa15.21■□□□□ 0.03
TGFBR3-201ENST00000212355 GCNT3O95395 438 aa15.21■□□□□ 0.03
TGFBR3-201ENST00000212355 HSPA1LP34931 641 aa15.21■□□□□ 0.03
TGFBR3-201ENST00000212355 CEP85LQ5SZL2 805 aa15.21■□□□□ 0.03
TGFBR3-201ENST00000212355 CYP26C1Q6V0L0 522 aa15.21■□□□□ 0.03
TGFBR3-201ENST00000212355 RNF34Q969K3 372 aa15.21■□□□□ 0.03
TGFBR3-201ENST00000212355 GSPT1P15170 499 aaKnown RBP15.21■□□□□ 0.02
TGFBR3-201ENST00000212355 ZNF131P52739 623 aa15.21■□□□□ 0.02
TGFBR3-201ENST00000212355 FMNL3Q8IVF7 1028 aa15.21■□□□□ 0.02
TGFBR3-201ENST00000212355 ORAI2Q96SN7 254 aa15.21■□□□□ 0.02
TGFBR3-201ENST00000212355 E7EVH7 732 aa15.2■□□□□ 0.02
TGFBR3-201ENST00000212355 TNNC1P63316 161 aa15.2■□□□□ 0.02
TGFBR3-201ENST00000212355 RBM28Q9NW13 759 aaKnown RBP15.2■□□□□ 0.02
TGFBR3-201ENST00000212355 GOLGA8HP0CJ92 632 aa15.2■□□□□ 0.02
TGFBR3-201ENST00000212355 SDR42E1Q8WUS8 393 aa15.2■□□□□ 0.02
TGFBR3-201ENST00000212355 KIFC2Q96AC6 838 aa15.2■□□□□ 0.02
TGFBR3-201ENST00000212355 OAS2P29728 719 aaKnown RBP15.2■□□□□ 0.02
TGFBR3-201ENST00000212355 CALCOCO2Q13137 446 aa15.2■□□□□ 0.02
TGFBR3-201ENST00000212355 CADPS2Q86UW7 1296 aa15.2■□□□□ 0.02
TGFBR3-201ENST00000212355 SREK1Q8WXA9 508 aaKnown RBP15.2■□□□□ 0.02
TGFBR3-201ENST00000212355 POSTNQ15063 836 aa15.2■□□□□ 0.02
TGFBR3-201ENST00000212355 BSPRYQ5W0U4 402 aa15.2■□□□□ 0.02
TGFBR3-201ENST00000212355 INTS4Q96HW7 963 aaKnown RBP15.2■□□□□ 0.02
TGFBR3-201ENST00000212355 XPO4Q9C0E2 1151 aaKnown RBP15.2■□□□□ 0.02
TGFBR3-201ENST00000212355 POLR3AO14802 1390 aaPredicted RBP15.2■□□□□ 0.02
TGFBR3-201ENST00000212355 ATP2A1O14983 1001 aa15.2■□□□□ 0.02
TGFBR3-201ENST00000212355 KRT19P08727 400 aa15.2■□□□□ 0.02
TGFBR3-201ENST00000212355 KCNA6P17658 529 aa15.2■□□□□ 0.02
TGFBR3-201ENST00000212355 MYCT1Q8N699 235 aa15.2■□□□□ 0.02
TGFBR3-201ENST00000212355 TSGA10Q9BZW7 698 aa15.2■□□□□ 0.02
TGFBR3-201ENST00000212355 TRIM7Q9C029 511 aa15.2■□□□□ 0.02
TGFBR3-201ENST00000212355 NYXQ9GZU5 481 aa15.2■□□□□ 0.02
TGFBR3-201ENST00000212355 NFE2L3Q9Y4A8 694 aa15.2■□□□□ 0.02
TGFBR3-201ENST00000212355 RAPGEF6Q8TEU7 1601 aa15.2■□□□□ 0.02
TGFBR3-201ENST00000212355 HIBADHP31937 336 aaKnown RBP15.19■□□□□ 0.02
TGFBR3-201ENST00000212355 NLRP12P59046 1061 aa15.19■□□□□ 0.02
TGFBR3-201ENST00000212355 SNX29Q8TEQ0 813 aa15.19■□□□□ 0.02
TGFBR3-201ENST00000212355 URB2Q14146 1524 aaKnown RBP15.19■□□□□ 0.02
TGFBR3-201ENST00000212355 USP37Q86T82 979 aa15.19■□□□□ 0.02
TGFBR3-201ENST00000212355 DEXIO95424 95 aa15.19■□□□□ 0.02
TGFBR3-201ENST00000212355 INTS8Q75QN2 995 aaKnown RBP15.19■□□□□ 0.02
TGFBR3-201ENST00000212355 METTL22Q9BUU2 404 aaPredicted RBP15.19■□□□□ 0.02
TGFBR3-201ENST00000212355 MTRF1LQ9UGC7 380 aaKnown RBP15.19■□□□□ 0.02
TGFBR3-201ENST00000212355 GOLGA6CA6NDK9 693 aa15.19■□□□□ 0.02
TGFBR3-201ENST00000212355 EYA2O00167 538 aa15.19■□□□□ 0.02
TGFBR3-201ENST00000212355 SH3BP5O60239 455 aa15.19■□□□□ 0.02
TGFBR3-201ENST00000212355 GOLGA6DP0CG33 693 aa15.19■□□□□ 0.02
TGFBR3-201ENST00000212355 KRT40Q6A162 431 aa15.19■□□□□ 0.02
TGFBR3-201ENST00000212355 GOLGA6AQ9NYA3 693 aa15.19■□□□□ 0.02
TGFBR3-201ENST00000212355 ANGEL1Q9UNK9 670 aaKnown RBP15.19■□□□□ 0.02
TGFBR3-201ENST00000212355 STK38LQ9Y2H1 464 aa15.19■□□□□ 0.02
TGFBR3-201ENST00000212355 E7EWF7 191 aa15.19■□□□□ 0.02
TGFBR3-201ENST00000212355 ABCB4P21439 1286 aa15.19■□□□□ 0.02
TGFBR3-201ENST00000212355 NAP1L3Q99457 506 aaPredicted RBP15.19■□□□□ 0.02
TGFBR3-201ENST00000212355 PPP1R12CQ9BZL4 782 aa15.19■□□□□ 0.02
TGFBR3-201ENST00000212355 ANKRD42Q8N9B4 389 aa15.18■□□□□ 0.02
TGFBR3-201ENST00000212355 UTP11Q9Y3A2 253 aaKnown RBP15.18■□□□□ 0.02
TGFBR3-201ENST00000212355 TRAPPC8Q9Y2L5 1435 aa15.18■□□□□ 0.02
TGFBR3-201ENST00000212355 PRPHP41219 470 aa15.18■□□□□ 0.02
TGFBR3-201ENST00000212355 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.18■□□□□ 0.02
TGFBR3-201ENST00000212355 SMC1BQ8NDV3 1235 aa15.18■□□□□ 0.02
TGFBR3-201ENST00000212355 SECISBP2LQ93073 1101 aaKnown RBP15.18■□□□□ 0.02
TGFBR3-201ENST00000212355 MPHOSPH6Q99547 160 aaKnown RBP15.18■□□□□ 0.02
TGFBR3-201ENST00000212355 KDM2BQ8NHM5 1336 aa15.18■□□□□ 0.02
TGFBR3-201ENST00000212355 A0A0D9SFI3 127 aa15.18■□□□□ 0.02
TGFBR3-201ENST00000212355 IL13P35225 146 aa15.18■□□□□ 0.02
TGFBR3-201ENST00000212355 PUM3Q15397 648 aaKnown RBP15.18■□□□□ 0.02
TGFBR3-201ENST00000212355 RRAGAQ7L523 313 aa15.18■□□□□ 0.02
TGFBR3-201ENST00000212355 GPKOWQ92917 476 aaPredicted RBP eCLIP15.18■□□□□ 0.02
TGFBR3-201ENST00000212355 NDUFAB1O14561 156 aa15.18■□□□□ 0.02
TGFBR3-201ENST00000212355 CFBP00751 764 aa15.18■□□□□ 0.02
TGFBR3-201ENST00000212355 MRPL44Q9H9J2 332 aaKnown RBP15.18■□□□□ 0.02
TGFBR3-201ENST00000212355 ODF2LQ9ULJ1 636 aa15.18■□□□□ 0.02
TGFBR3-201ENST00000212355 SGSM2O43147 1006 aa15.18■□□□□ 0.02
TGFBR3-201ENST00000212355 HERC4Q5GLZ8 1057 aaPredicted RBP15.18■□□□□ 0.02
TGFBR3-201ENST00000212355 CEP83Q9Y592 693 aa15.18■□□□□ 0.02
TGFBR3-201ENST00000212355 WDR44Q5JSH3 913 aa15.17■□□□□ 0.02
TGFBR3-201ENST00000212355 ERO1AQ96HE7 468 aa15.17■□□□□ 0.02
TGFBR3-201ENST00000212355 VPS41P49754 854 aa15.17■□□□□ 0.02
TGFBR3-201ENST00000212355 TACO1Q9BSH4 297 aaKnown RBP15.17■□□□□ 0.02
TGFBR3-201ENST00000212355 STMN4Q9H169 189 aaPredicted RBP15.17■□□□□ 0.02
TGFBR3-201ENST00000212355 RAD50Q92878 1312 aa15.17■□□□□ 0.02
TGFBR3-201ENST00000212355 GPT2Q8TD30 523 aa15.17■□□□□ 0.02
TGFBR3-201ENST00000212355 ASIC3Q9UHC3 531 aa15.17■□□□□ 0.02
TGFBR3-201ENST00000212355 TECP42680 631 aa15.17■□□□□ 0.02
TGFBR3-201ENST00000212355 ATP1A2P50993 1020 aa15.17■□□□□ 0.02
TGFBR3-201ENST00000212355 LLGL1Q15334 1064 aa15.17■□□□□ 0.02
TGFBR3-201ENST00000212355 SPATA24Q86W54 205 aa15.17■□□□□ 0.02
TGFBR3-201ENST00000212355 SPATA5Q8NB90 893 aa15.17■□□□□ 0.02
TGFBR3-201ENST00000212355 ARHGEF2Q92974 986 aaKnown RBP15.17■□□□□ 0.02
TGFBR3-201ENST00000212355 DCAF5Q96JK2 942 aa15.17■□□□□ 0.02
TGFBR3-201ENST00000212355 CTTNBP2NLQ9P2B4 639 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms