RNA–Protein interactions for RNA: ENST00000081029.7

MRPS35-201, Transcript of mitochondrial ribosomal protein S35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS35, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-201ENST00000081029 PAPPA2Q9BXP8 1791 aa12.65□□□□□ -0.38
MRPS35-201ENST00000081029 MFAP1P55081 439 aaKnown RBP12.65□□□□□ -0.38
MRPS35-201ENST00000081029 NMIQ13287 307 aaPredicted RBP12.65□□□□□ -0.38
MRPS35-201ENST00000081029 VGLL4Q14135 290 aa12.65□□□□□ -0.38
MRPS35-201ENST00000081029 MAP3K11Q16584 847 aa12.65□□□□□ -0.38
MRPS35-201ENST00000081029 CWC27Q6UX04 472 aaKnown RBP12.65□□□□□ -0.38
MRPS35-201ENST00000081029 TTC6Q86TZ1 520 aa12.65□□□□□ -0.38
MRPS35-201ENST00000081029 STK11IPQ8N1F8 1099 aa12.65□□□□□ -0.38
MRPS35-201ENST00000081029 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.65□□□□□ -0.382e-13■□□□□ 11
MRPS35-201ENST00000081029 UPF2Q9HAU5 1272 aaKnown RBP12.65□□□□□ -0.38
MRPS35-201ENST00000081029 ATP8A2Q9NTI2 1148 aa12.65□□□□□ -0.38
MRPS35-201ENST00000081029 CYP2D6P10635 497 aa12.64□□□□□ -0.39
MRPS35-201ENST00000081029 PLCD1P51178 756 aa12.64□□□□□ -0.39
MRPS35-201ENST00000081029 FOXP4Q8IVH2 680 aaPredicted RBP12.64□□□□□ -0.39
MRPS35-201ENST00000081029 TBC1D32Q96NH3 1257 aa12.64□□□□□ -0.39
MRPS35-201ENST00000081029 ZIC5Q96T25 663 aa12.64□□□□□ -0.39
MRPS35-201ENST00000081029 ATRNL1Q5VV63 1379 aa12.64□□□□□ -0.39
MRPS35-201ENST00000081029 CYP2D7A0A087X1C5 515 aa12.63□□□□□ -0.39
MRPS35-201ENST00000081029 A0A0D9SFI3 127 aa12.63□□□□□ -0.39
MRPS35-201ENST00000081029 USP17L12C9JPN9 530 aa12.63□□□□□ -0.39
MRPS35-201ENST00000081029 USP17L21D6R901 530 aa12.63□□□□□ -0.39
MRPS35-201ENST00000081029 TDO2P48775 406 aa12.63□□□□□ -0.39
MRPS35-201ENST00000081029 EVX2Q03828 476 aa12.63□□□□□ -0.39
MRPS35-201ENST00000081029 MCMDC2Q4G0Z9 681 aa12.63□□□□□ -0.39
MRPS35-201ENST00000081029 RASAL3Q86YV0 1011 aa12.63□□□□□ -0.39
MRPS35-201ENST00000081029 AMOTL1Q8IY63 956 aa12.63□□□□□ -0.39
MRPS35-201ENST00000081029 CNKSR2Q8WXI2 1034 aa12.63□□□□□ -0.39
MRPS35-201ENST00000081029 OTUD5Q96G74 571 aa12.63□□□□□ -0.39
MRPS35-201ENST00000081029 IPO9Q96P70 1041 aaKnown RBP12.63□□□□□ -0.39
MRPS35-201ENST00000081029 CDK5RAP2Q96SN8 1893 aa12.63□□□□□ -0.39
MRPS35-201ENST00000081029 GSG1L2A8MUP6 293 aa12.63□□□□□ -0.39
MRPS35-201ENST00000081029 MINDY4BA8MYZ0 360 aa12.63□□□□□ -0.39
MRPS35-201ENST00000081029 FAM155AB1AL88 458 aaPredicted RBP12.63□□□□□ -0.39
MRPS35-201ENST00000081029 SLC10A3P09131 477 aa12.63□□□□□ -0.39
MRPS35-201ENST00000081029 GNAT2P19087 354 aa12.63□□□□□ -0.39
MRPS35-201ENST00000081029 KIF23Q02241 960 aaPredicted RBP12.63□□□□□ -0.39
MRPS35-201ENST00000081029 NOGQ13253 232 aa12.63□□□□□ -0.39
MRPS35-201ENST00000081029 OPTNQ96CV9 577 aa12.63□□□□□ -0.39
MRPS35-201ENST00000081029 PICK1Q9NRD5 415 aa12.63□□□□□ -0.39
MRPS35-201ENST00000081029 HELLSQ9NRZ9 838 aa12.63□□□□□ -0.39
MRPS35-201ENST00000081029 SERPINB13Q9UIV8 391 aa12.63□□□□□ -0.39
MRPS35-201ENST00000081029 PCNTO95613 3336 aa12.62□□□□□ -0.39
MRPS35-201ENST00000081029 PHF20L1A8MW92 1017 aa12.62□□□□□ -0.39
MRPS35-201ENST00000081029 PATL2C9JE40 543 aaKnown RBP12.62□□□□□ -0.39
MRPS35-201ENST00000081029 TBC1D12O60347 775 aa12.62□□□□□ -0.39
MRPS35-201ENST00000081029 C22orf23Q9BZE7 217 aa12.62□□□□□ -0.39
MRPS35-201ENST00000081029 NACAP1Q9BZK3 213 aa12.62□□□□□ -0.39
MRPS35-201ENST00000081029 HERC5Q9UII4 1024 aaKnown RBP12.62□□□□□ -0.39
MRPS35-201ENST00000081029 MYH1P12882 1939 aa12.62□□□□□ -0.39
MRPS35-201ENST00000081029 SMIM22K7EJ46 135 aa12.61□□□□□ -0.39
MRPS35-201ENST00000081029 HIP1O00291 1037 aa12.61□□□□□ -0.39
MRPS35-201ENST00000081029 SPRYD7Q5W111 196 aa12.61□□□□□ -0.39
MRPS35-201ENST00000081029 CTR9Q6PD62 1173 aa12.61□□□□□ -0.39
MRPS35-201ENST00000081029 IFNL3Q8IZI9 196 aa12.61□□□□□ -0.39
MRPS35-201ENST00000081029 DYNLL2Q96FJ2 89 aa12.61□□□□□ -0.39
MRPS35-201ENST00000081029 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.61□□□□□ -0.39
MRPS35-201ENST00000081029 ZNF112Q9UJU3 913 aa12.61□□□□□ -0.39
MRPS35-201ENST00000081029 SNCAIPQ9Y6H5 919 aa12.61□□□□□ -0.39
MRPS35-201ENST00000081029 CTNND1O60716 968 aaKnown RBP12.61□□□□□ -0.39
MRPS35-201ENST00000081029 GDF11O95390 407 aa12.61□□□□□ -0.39
MRPS35-201ENST00000081029 CHMLP26374 656 aa12.61□□□□□ -0.39
MRPS35-201ENST00000081029 MAP2K2P36507 400 aa12.61□□□□□ -0.39
MRPS35-201ENST00000081029 MAP3K10Q02779 954 aa12.61□□□□□ -0.39
MRPS35-201ENST00000081029 VPS53Q5VIR6 699 aa12.61□□□□□ -0.39
MRPS35-201ENST00000081029 CASC1Q6TDU7 716 aa12.61□□□□□ -0.39
MRPS35-201ENST00000081029 ZNF589Q86UQ0 364 aaPredicted RBP12.61□□□□□ -0.39
MRPS35-201ENST00000081029 CCDC84Q86UT8 332 aaPredicted RBP12.61□□□□□ -0.39
MRPS35-201ENST00000081029 WNK4Q96J92 1243 aa12.61□□□□□ -0.39
MRPS35-201ENST00000081029 NAPBQ9H115 298 aa12.61□□□□□ -0.39
MRPS35-201ENST00000081029 DNAJC18Q9H819 358 aa12.61□□□□□ -0.39
MRPS35-201ENST00000081029 BAZ2AQ9UIF9 1905 aaKnown RBP12.6□□□□□ -0.39
MRPS35-201ENST00000081029 UNCXA6NJT0 531 aa12.6□□□□□ -0.39
MRPS35-201ENST00000081029 EIF5BO60841 1220 aaKnown RBP12.6□□□□□ -0.39
MRPS35-201ENST00000081029 RRP1BQ14684 758 aaKnown RBP12.6□□□□□ -0.39
MRPS35-201ENST00000081029 C12orf60Q5U649 245 aa12.6□□□□□ -0.39
MRPS35-201ENST00000081029 ERO1BQ86YB8 467 aa12.6□□□□□ -0.39
MRPS35-201ENST00000081029 SCYL3Q8IZE3 742 aa12.6□□□□□ -0.39
MRPS35-201ENST00000081029 SLC44A5Q8NCS7 719 aa12.6□□□□□ -0.39
MRPS35-201ENST00000081029 BEGAINQ9BUH8 593 aa12.6□□□□□ -0.39
MRPS35-201ENST00000081029 ZHX2Q9Y6X8 837 aa12.6□□□□□ -0.39
MRPS35-201ENST00000081029 FOCADQ5VW36 1801 aa12.6□□□□□ -0.39
MRPS35-201ENST00000081029 COL2A1P02458 1487 aaPredicted RBP12.6□□□□□ -0.39
MRPS35-201ENST00000081029 MPHOSPH10O00566 681 aaKnown RBP12.59□□□□□ -0.39
MRPS35-201ENST00000081029 GJA5P36382 358 aa12.59□□□□□ -0.39
MRPS35-201ENST00000081029 CAP2P40123 477 aa12.59□□□□□ -0.39
MRPS35-201ENST00000081029 SHROOM1Q2M3G4 852 aaPredicted RBP12.59□□□□□ -0.39
MRPS35-201ENST00000081029 CERKLQ49MI3 558 aaPredicted RBP12.59□□□□□ -0.39
MRPS35-201ENST00000081029 EPB41L4AQ9HCS5 686 aaPredicted RBP12.59□□□□□ -0.39
MRPS35-201ENST00000081029 CCDC171Q6TFL3 1326 aa12.59□□□□□ -0.39
MRPS35-201ENST00000081029 IRF6O14896 467 aa12.59□□□□□ -0.39
MRPS35-201ENST00000081029 PTPRAP18433 802 aa12.59□□□□□ -0.39
MRPS35-201ENST00000081029 RBM25P49756 843 aaKnown RBP12.59□□□□□ -0.39
MRPS35-201ENST00000081029 MAP2K1Q02750 393 aaPredicted RBP12.59□□□□□ -0.39
MRPS35-201ENST00000081029 GIMAP6Q6P9H5 292 aa12.59□□□□□ -0.39
MRPS35-201ENST00000081029 TICAM2Q86XR7 235 aa12.59□□□□□ -0.39
MRPS35-201ENST00000081029 EHD4Q9H223 541 aa12.59□□□□□ -0.39
MRPS35-201ENST00000081029 ARPP21Q9UBL0 812 aaPredicted RBP12.59□□□□□ -0.39
MRPS35-201ENST00000081029 SPDYE5A6NIY4 337 aa12.58□□□□□ -0.4
MRPS35-201ENST00000081029 ZBTB48P10074 688 aaPredicted RBP12.58□□□□□ -0.4
MRPS35-201ENST00000081029 HSPD1P10809 573 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms