RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 PMCHL1Q16048 86 aa0.87□□□□□ -2.27
VAPA-208ENST00000584796 SFTA2Q6UW10 78 aa0.87□□□□□ -2.27
VAPA-208ENST00000584796 Q6ZRX8 168 aa0.87□□□□□ -2.27
VAPA-208ENST00000584796 KRTAP8-1Q8IUC2 63 aa0.87□□□□□ -2.27
VAPA-208ENST00000584796 LINC01558Q9Y6Z2 57 aa0.87□□□□□ -2.27
VAPA-208ENST00000584796 KANTRA0A1W2PQU2 76 aa0.86□□□□□ -2.27
VAPA-208ENST00000584796 F8WEM9 126 aa0.86□□□□□ -2.27
VAPA-208ENST00000584796 MT1XP80297 61 aa0.86□□□□□ -2.27
VAPA-208ENST00000584796 LINC00472Q9H8W2 130 aa0.86□□□□□ -2.27
VAPA-208ENST00000584796 LINC00158P58513 81 aa0.85□□□□□ -2.27
VAPA-208ENST00000584796 TMEM170BQ5T4T1 132 aa0.85□□□□□ -2.27
VAPA-208ENST00000584796 DEFB105AQ8NG35 78 aa0.85□□□□□ -2.27
VAPA-208ENST00000584796 SPRR2GQ9BYE4 73 aa0.85□□□□□ -2.27
VAPA-208ENST00000584796 SMIM27A0A1W2PRY6 76 aa0.84□□□□□ -2.27
VAPA-208ENST00000584796 ZNF815PA8K554 130 aa0.84□□□□□ -2.27
VAPA-208ENST00000584796 BAGE3Q86Y29 109 aa0.84□□□□□ -2.27
VAPA-208ENST00000584796 MYMXA0A1B0GTQ4 84 aa0.83□□□□□ -2.28
VAPA-208ENST00000584796 UQCR11O14957 56 aa0.83□□□□□ -2.28
VAPA-208ENST00000584796 ACYP2P14621 99 aa0.83□□□□□ -2.28
VAPA-208ENST00000584796 PLAC4Q8WY50 150 aa0.83□□□□□ -2.28
VAPA-208ENST00000584796 PRR15LQ9BU68 103 aa0.83□□□□□ -2.28
VAPA-208ENST00000584796 TRBV7-4A0A0J9YYF1 115 aa0.82□□□□□ -2.28
VAPA-208ENST00000584796 UMAD1C9J7I0 102 aa0.82□□□□□ -2.28
VAPA-208ENST00000584796 COX17Q14061 63 aa0.82□□□□□ -2.28
VAPA-208ENST00000584796 WFDC13Q8IUB5 93 aa0.82□□□□□ -2.28
VAPA-208ENST00000584796 IGLV5-48A0A075B6I7 105 aa0.81□□□□□ -2.28
VAPA-208ENST00000584796 A0A087WVE0 104 aa0.81□□□□□ -2.28
VAPA-208ENST00000584796 SPINK7P58062 85 aa0.81□□□□□ -2.28
VAPA-208ENST00000584796 Q6JHZ5 121 aa0.81□□□□□ -2.28
VAPA-208ENST00000584796 SPATA8Q6RVD6 105 aa0.81□□□□□ -2.28
VAPA-208ENST00000584796 SMIM11BQ8TCY0 68 aa0.81□□□□□ -2.28
VAPA-208ENST00000584796 S100ZQ8WXG8 99 aa0.81□□□□□ -2.28
VAPA-208ENST00000584796 LINC01546A6NGU7 62 aa0.8□□□□□ -2.28
VAPA-208ENST00000584796 LEPROTL1O95214 131 aa0.79□□□□□ -2.28
VAPA-208ENST00000584796 COX7BP24311 80 aa0.79□□□□□ -2.28
VAPA-208ENST00000584796 MUSTN1Q8IVN3 82 aa0.79□□□□□ -2.28
VAPA-208ENST00000584796 K7EMI3 77 aa0.78□□□□□ -2.28
VAPA-208ENST00000584796 COX8AP10176 69 aa0.78□□□□□ -2.28
VAPA-208ENST00000584796 KRTAP20-2Q3LI61 65 aa0.78□□□□□ -2.28
VAPA-208ENST00000584796 KRTAP19-7Q3SYF9 63 aa0.78□□□□□ -2.28
VAPA-208ENST00000584796 H1FX-AS1Q4G0G2 97 aa0.78□□□□□ -2.28
VAPA-208ENST00000584796 ATP5EP2Q5VTU8 51 aa0.78□□□□□ -2.28
VAPA-208ENST00000584796 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.29
VAPA-208ENST00000584796 H0Y9P7 68 aa0.77□□□□□ -2.29
VAPA-208ENST00000584796 LINC00308Q8TCZ7 52 aa0.77□□□□□ -2.29
VAPA-208ENST00000584796 MT1EP04732 61 aa0.76□□□□□ -2.29
VAPA-208ENST00000584796 KRTAP19-3Q7Z4W3 81 aa0.76□□□□□ -2.29
VAPA-208ENST00000584796 SYNE1Q8NF91 8797 aaKnown RBP0.76□□□□□ -2.29
VAPA-208ENST00000584796 MT1MQ8N339 61 aa0.75□□□□□ -2.29
VAPA-208ENST00000584796 C3orf79P0CE67 100 aa0.74□□□□□ -2.29
VAPA-208ENST00000584796 H0YAA0 97 aa0.71□□□□□ -2.3
VAPA-208ENST00000584796 NDUFB1O75438 58 aa0.71□□□□□ -2.3
VAPA-208ENST00000584796 S4R3F8 94 aa0.71□□□□□ -2.3
VAPA-208ENST00000584796 A0A1B0GU69 56 aa0.7□□□□□ -2.3
VAPA-208ENST00000584796 ATXN8Q156A1 80 aa0.7□□□□□ -2.3
VAPA-208ENST00000584796 NREPQ16612 68 aa0.7□□□□□ -2.3
VAPA-208ENST00000584796 KRTAP19-5Q3LI72 72 aa0.7□□□□□ -2.3
VAPA-208ENST00000584796 MT1LQ93083 61 aa0.7□□□□□ -2.3
VAPA-208ENST00000584796 C10orf95Q9H7T3 257 aa0.7□□□□□ -2.3
VAPA-208ENST00000584796 A0A0D9SG42 100 aa0.69□□□□□ -2.3
VAPA-208ENST00000584796 LINC01549A6NIU2 74 aa0.69□□□□□ -2.3
VAPA-208ENST00000584796 MT1GP13640 62 aa0.69□□□□□ -2.3
VAPA-208ENST00000584796 MMP24-AS1A0A0U1RRL7 71 aa0.68□□□□□ -2.3
VAPA-208ENST00000584796 K7EQZ3 153 aa0.68□□□□□ -2.3
VAPA-208ENST00000584796 PLNP26678 52 aa0.67□□□□□ -2.3
VAPA-208ENST00000584796 CRIPTQ9P021 101 aa0.67□□□□□ -2.3
VAPA-208ENST00000584796 MRPL34Q9BQ48 92 aaKnown RBP0.65□□□□□ -2.31
VAPA-208ENST00000584796 TP53AIP1Q9HCN2 124 aa0.65□□□□□ -2.31
VAPA-208ENST00000584796 M0QZ58 72 aa0.63□□□□□ -2.31
VAPA-208ENST00000584796 KRTAP6-1Q3LI64 71 aa0.63□□□□□ -2.31
VAPA-208ENST00000584796 KRTAP6-2Q3LI66 62 aa0.62□□□□□ -2.31
VAPA-208ENST00000584796 UBL5Q9BZL1 73 aa0.6□□□□□ -2.31
VAPA-208ENST00000584796 H0YGX0 51 aa0.58□□□□□ -2.32
VAPA-208ENST00000584796 MT1AP04731 61 aa0.57□□□□□ -2.32
VAPA-208ENST00000584796 PHGR1C9JFL3 82 aa0.54□□□□□ -2.32
VAPA-208ENST00000584796 TNP1P09430 55 aa0.42□□□□□ -2.34
VAPA-208ENST00000584796 KRTAP21-1Q3LI58 79 aa0.37□□□□□ -2.35
VAPA-208ENST00000584796 PRM1P04553 51 aa0.36□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 83.5 ms