RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 SPRR2EP22531 72 aa0.54□□□□□ -2.32
SMCHD1-205ENST00000581383 SPRR2BP35325 72 aa0.54□□□□□ -2.32
SMCHD1-205ENST00000581383 SPRR2AP35326 72 aa0.54□□□□□ -2.32
SMCHD1-205ENST00000581383 BVES-AS1Q5T3Y7 98 aa0.54□□□□□ -2.32
SMCHD1-205ENST00000581383 COPS9Q8WXC6 57 aa0.54□□□□□ -2.32
SMCHD1-205ENST00000581383 SPRR2FQ96RM1 72 aa0.54□□□□□ -2.32
SMCHD1-205ENST00000581383 LINC00472Q9H8W2 130 aa0.54□□□□□ -2.32
SMCHD1-205ENST00000581383 SERP1Q9Y6X1 66 aa0.54□□□□□ -2.32
SMCHD1-205ENST00000581383 TRBV7-4A0A0J9YYF1 115 aa0.53□□□□□ -2.32
SMCHD1-205ENST00000581383 HCG22E2RYF7 251 aa0.53□□□□□ -2.32
SMCHD1-205ENST00000581383 K7EP34 96 aa0.53□□□□□ -2.32
SMCHD1-205ENST00000581383 ACYP2P14621 99 aa0.53□□□□□ -2.32
SMCHD1-205ENST00000581383 HSD52Q0P140 79 aa0.53□□□□□ -2.32
SMCHD1-205ENST00000581383 Q5VV11 94 aa0.53□□□□□ -2.32
SMCHD1-205ENST00000581383 VAMP8Q9BV40 100 aa0.53□□□□□ -2.32
SMCHD1-205ENST00000581383 KRTAP2-1Q9BYU5 128 aa0.53□□□□□ -2.32
SMCHD1-205ENST00000581383 PRO1854Q9UHT4 67 aa0.53□□□□□ -2.32
SMCHD1-205ENST00000581383 H0YGX0 51 aa0.52□□□□□ -2.33
SMCHD1-205ENST00000581383 DLEU1O43261 78 aa0.52□□□□□ -2.33
SMCHD1-205ENST00000581383 SPRR2DP22532 72 aa0.52□□□□□ -2.33
SMCHD1-205ENST00000581383 KRTAP19-8Q3LI54 63 aa0.52□□□□□ -2.33
SMCHD1-205ENST00000581383 H1FX-AS1Q4G0G2 97 aa0.52□□□□□ -2.33
SMCHD1-205ENST00000581383 PYY3Q5JQD4 70 aa0.52□□□□□ -2.33
SMCHD1-205ENST00000581383 MRPL34Q9BQ48 92 aaKnown RBP0.52□□□□□ -2.33
SMCHD1-205ENST00000581383 S4R3F8 94 aa0.52□□□□□ -2.33
SMCHD1-205ENST00000581383 NDUFB1O75438 58 aa0.51□□□□□ -2.33
SMCHD1-205ENST00000581383 S100A1P23297 94 aa0.51□□□□□ -2.33
SMCHD1-205ENST00000581383 MT1XP80297 61 aa0.51□□□□□ -2.33
SMCHD1-205ENST00000581383 KRTAP8-1Q8IUC2 63 aa0.51□□□□□ -2.33
SMCHD1-205ENST00000581383 PRR15LQ9BU68 103 aa0.51□□□□□ -2.33
SMCHD1-205ENST00000581383 HIGD1BQ9P298 99 aa0.51□□□□□ -2.33
SMCHD1-205ENST00000581383 COX6CP09669 75 aa0.5□□□□□ -2.33
SMCHD1-205ENST00000581383 ATXN8Q156A1 80 aa0.5□□□□□ -2.33
SMCHD1-205ENST00000581383 NREPQ16612 68 aa0.5□□□□□ -2.33
SMCHD1-205ENST00000581383 SPRR2GQ9BYE4 73 aa0.5□□□□□ -2.33
SMCHD1-205ENST00000581383 UQCR10Q9UDW1 63 aa0.5□□□□□ -2.33
SMCHD1-205ENST00000581383 SPCS1Q9Y6A9 102 aa0.5□□□□□ -2.33
SMCHD1-205ENST00000581383 PHGR1C9JFL3 82 aa0.48□□□□□ -2.33
SMCHD1-205ENST00000581383 M0QZ58 72 aa0.48□□□□□ -2.33
SMCHD1-205ENST00000581383 M0R143 59 aa0.48□□□□□ -2.33
SMCHD1-205ENST00000581383 MT4P47944 62 aa0.48□□□□□ -2.33
SMCHD1-205ENST00000581383 H0Y9P7 68 aa0.47□□□□□ -2.33
SMCHD1-205ENST00000581383 TRAV22A0A0B4J277 110 aa0.46□□□□□ -2.34
SMCHD1-205ENST00000581383 H0YAA0 97 aa0.46□□□□□ -2.34
SMCHD1-205ENST00000581383 MT1EP04732 61 aa0.46□□□□□ -2.34
SMCHD1-205ENST00000581383 SMIM6P0DI80 62 aa0.46□□□□□ -2.34
SMCHD1-205ENST00000581383 KRTAP19-7Q3SYF9 63 aa0.46□□□□□ -2.34
SMCHD1-205ENST00000581383 UBL5Q9BZL1 73 aa0.46□□□□□ -2.34
SMCHD1-205ENST00000581383 CYP4F30PQ9H0H9 118 aa0.46□□□□□ -2.34
SMCHD1-205ENST00000581383 NDUFC1O43677 76 aa0.45□□□□□ -2.34
SMCHD1-205ENST00000581383 MT-ATP8P03928 68 aa0.45□□□□□ -2.34
SMCHD1-205ENST00000581383 ETDBQ3ZM63 59 aa0.45□□□□□ -2.34
SMCHD1-205ENST00000581383 CRIPTQ9P021 101 aa0.45□□□□□ -2.34
SMCHD1-205ENST00000581383 SYNE1Q8NF91 8797 aaKnown RBP0.44□□□□□ -2.34
SMCHD1-205ENST00000581383 ACYP1P07311 99 aa0.44□□□□□ -2.34
SMCHD1-205ENST00000581383 KRTAP19-5Q3LI72 72 aa0.44□□□□□ -2.34
SMCHD1-205ENST00000581383 MT1MQ8N339 61 aa0.44□□□□□ -2.34
SMCHD1-205ENST00000581383 COL5A1-AS1Q5SY13 56 aa0.43□□□□□ -2.34
SMCHD1-205ENST00000581383 TP53AIP1Q9HCN2 124 aa0.43□□□□□ -2.34
SMCHD1-205ENST00000581383 CHKB-CPT1BH3BT56 60 aa0.42□□□□□ -2.34
SMCHD1-205ENST00000581383 ATOX1O00244 68 aa0.42□□□□□ -2.34
SMCHD1-205ENST00000581383 MT1GP13640 62 aa0.42□□□□□ -2.34
SMCHD1-205ENST00000581383 ATP5EP2Q5VTU8 51 aa0.42□□□□□ -2.34
SMCHD1-205ENST00000581383 MT1LQ93083 61 aa0.42□□□□□ -2.34
SMCHD1-205ENST00000581383 KRTAP20-2Q3LI61 65 aa0.41□□□□□ -2.34
SMCHD1-205ENST00000581383 GTF2H5Q6ZYL4 71 aa0.41□□□□□ -2.34
SMCHD1-205ENST00000581383 LINC00643Q86TS7 51 aa0.4□□□□□ -2.35
SMCHD1-205ENST00000581383 KRTAP6-1Q3LI64 71 aa0.37□□□□□ -2.35
SMCHD1-205ENST00000581383 A0A1B0GU69 56 aa0.36□□□□□ -2.35
SMCHD1-205ENST00000581383 TNP1P09430 55 aa0.36□□□□□ -2.35
SMCHD1-205ENST00000581383 KRTAP6-2Q3LI66 62 aa0.36□□□□□ -2.35
SMCHD1-205ENST00000581383 MT1AP04731 61 aa0.35□□□□□ -2.35
SMCHD1-205ENST00000581383 SERP2Q8N6R1 65 aa0.35□□□□□ -2.35
SMCHD1-205ENST00000581383 H7BZZ5 65 aa0.34□□□□□ -2.36
SMCHD1-205ENST00000581383 ATP5EP56381 51 aaPredicted RBP0.34□□□□□ -2.36
SMCHD1-205ENST00000581383 UQCR11O14957 56 aa0.33□□□□□ -2.36
SMCHD1-205ENST00000581383 LINC01558Q9Y6Z2 57 aa0.32□□□□□ -2.36
SMCHD1-205ENST00000581383 PRM1P04553 51 aa0.17□□□□□ -2.38
Retrieved 78 of 20,778 RNA–protein pairs in 69.6 ms