RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 MT1HL1P0DM35 61 aa0.97□□□□□ -2.25
HERPUD1-211ENST00000566550 LINC00158P58513 81 aa0.97□□□□□ -2.25
HERPUD1-211ENST00000566550 RPL39P62891 51 aaKnown RBP0.97□□□□□ -2.25
HERPUD1-211ENST00000566550 KRTAP5-10Q6L8G5 202 aa0.97□□□□□ -2.25
HERPUD1-211ENST00000566550 DEFB131BA0A096LNP1 70 aa0.96□□□□□ -2.26
HERPUD1-211ENST00000566550 NDUFA1O15239 70 aa0.96□□□□□ -2.26
HERPUD1-211ENST00000566550 ENHOQ6UWT2 76 aa0.96□□□□□ -2.26
HERPUD1-211ENST00000566550 APLNQ9ULZ1 77 aa0.96□□□□□ -2.26
HERPUD1-211ENST00000566550 MUC5ACP98088 5654 aa0.96□□□□□ -2.26
HERPUD1-211ENST00000566550 DNAH8Q96JB1 4490 aa0.95□□□□□ -2.26
HERPUD1-211ENST00000566550 LINC01546A6NGU7 62 aa0.95□□□□□ -2.26
HERPUD1-211ENST00000566550 IGIPA6NJ69 53 aa0.95□□□□□ -2.26
HERPUD1-211ENST00000566550 A8MTW9 85 aa0.95□□□□□ -2.26
HERPUD1-211ENST00000566550 H3BNG1 76 aa0.95□□□□□ -2.26
HERPUD1-211ENST00000566550 POLR2KP53803 58 aaKnown RBP0.95□□□□□ -2.26
HERPUD1-211ENST00000566550 MRPL34Q9BQ48 92 aaKnown RBP0.95□□□□□ -2.26
HERPUD1-211ENST00000566550 CDKN2A-AS1Q9UH64 79 aa0.95□□□□□ -2.26
HERPUD1-211ENST00000566550 ETDCA0A1B0GVM5 59 aa0.94□□□□□ -2.26
HERPUD1-211ENST00000566550 H0YGX0 51 aa0.94□□□□□ -2.26
HERPUD1-211ENST00000566550 M0R2T5 61 aa0.94□□□□□ -2.26
HERPUD1-211ENST00000566550 LINC00308Q8TCZ7 52 aa0.94□□□□□ -2.26
HERPUD1-211ENST00000566550 LINC01556Q5JQF7 62 aa0.93□□□□□ -2.26
HERPUD1-211ENST00000566550 WFDC10BQ8IUB3 73 aa0.93□□□□□ -2.26
HERPUD1-211ENST00000566550 UBL5Q9BZL1 73 aa0.93□□□□□ -2.26
HERPUD1-211ENST00000566550 SPRR1BP22528 89 aa0.92□□□□□ -2.26
HERPUD1-211ENST00000566550 MUC17Q685J3 4493 aa0.91□□□□□ -2.26
HERPUD1-211ENST00000566550 SPRR1AP35321 89 aa0.91□□□□□ -2.26
HERPUD1-211ENST00000566550 DEFB105AQ8NG35 78 aa0.91□□□□□ -2.26
HERPUD1-211ENST00000566550 SPRR2EP22531 72 aa0.9□□□□□ -2.27
HERPUD1-211ENST00000566550 SPRR2BP35325 72 aa0.9□□□□□ -2.27
HERPUD1-211ENST00000566550 SPRR2AP35326 72 aa0.9□□□□□ -2.27
HERPUD1-211ENST00000566550 KRTAP19-6Q3LI70 58 aa0.9□□□□□ -2.27
HERPUD1-211ENST00000566550 C6orf48Q9UBA6 75 aa0.9□□□□□ -2.27
HERPUD1-211ENST00000566550 SPRR2DP22532 72 aa0.89□□□□□ -2.27
HERPUD1-211ENST00000566550 MT1HP80294 61 aa0.88□□□□□ -2.27
HERPUD1-211ENST00000566550 PRLHP81277 87 aa0.88□□□□□ -2.27
HERPUD1-211ENST00000566550 H1FX-AS1Q4G0G2 97 aa0.88□□□□□ -2.27
HERPUD1-211ENST00000566550 A0A096LNI7 61 aa0.87□□□□□ -2.27
HERPUD1-211ENST00000566550 KCNQ1DNQ9H478 68 aa0.87□□□□□ -2.27
HERPUD1-211ENST00000566550 SPINK6Q6UWN8 80 aa0.86□□□□□ -2.27
HERPUD1-211ENST00000566550 WFDC13Q8IUB5 93 aa0.85□□□□□ -2.27
HERPUD1-211ENST00000566550 IGLV5-48A0A075B6I7 105 aa0.84□□□□□ -2.27
HERPUD1-211ENST00000566550 FLGP20930 4061 aaPredicted RBP0.84□□□□□ -2.28
HERPUD1-211ENST00000566550 SPINK1P00995 79 aa0.82□□□□□ -2.28
HERPUD1-211ENST00000566550 COX6B2Q6YFQ2 88 aa0.82□□□□□ -2.28
HERPUD1-211ENST00000566550 SPRR2FQ96RM1 72 aa0.81□□□□□ -2.28
HERPUD1-211ENST00000566550 MMP24-AS1A0A0U1RRL7 71 aa0.8□□□□□ -2.28
HERPUD1-211ENST00000566550 RPS29P62273 56 aaKnown RBP0.8□□□□□ -2.28
HERPUD1-211ENST00000566550 C9orf92A6NGG3 77 aa0.79□□□□□ -2.28
HERPUD1-211ENST00000566550 KRTAP19-3Q7Z4W3 81 aa0.79□□□□□ -2.28
HERPUD1-211ENST00000566550 MT4P47944 62 aa0.78□□□□□ -2.28
HERPUD1-211ENST00000566550 S4R3F8 94 aa0.75□□□□□ -2.29
HERPUD1-211ENST00000566550 KRTAP19-2Q3LHN2 52 aa0.74□□□□□ -2.29
HERPUD1-211ENST00000566550 H0YAA0 97 aa0.73□□□□□ -2.29
HERPUD1-211ENST00000566550 MT2AP02795 61 aa0.71□□□□□ -2.3
HERPUD1-211ENST00000566550 M0QZ58 72 aa0.7□□□□□ -2.3
HERPUD1-211ENST00000566550 MT1FP04733 61 aa0.69□□□□□ -2.3
HERPUD1-211ENST00000566550 KRTAP8-1Q8IUC2 63 aa0.68□□□□□ -2.3
HERPUD1-211ENST00000566550 SYNE1Q8NF91 8797 aaKnown RBP0.66□□□□□ -2.3
HERPUD1-211ENST00000566550 TNP1P09430 55 aa0.64□□□□□ -2.31
HERPUD1-211ENST00000566550 PHGR1C9JFL3 82 aa0.63□□□□□ -2.31
HERPUD1-211ENST00000566550 KRTAP20-2Q3LI61 65 aa0.62□□□□□ -2.31
HERPUD1-211ENST00000566550 MUC16Q8WXI7 14507 aa0.6□□□□□ -2.31
HERPUD1-211ENST00000566550 SPRR2GQ9BYE4 73 aa0.58□□□□□ -2.32
HERPUD1-211ENST00000566550 PRM1P04553 51 aa0.57□□□□□ -2.32
HERPUD1-211ENST00000566550 KRTAP19-8Q3LI54 63 aa0.54□□□□□ -2.32
HERPUD1-211ENST00000566550 MT1BP07438 61 aa0.52□□□□□ -2.33
HERPUD1-211ENST00000566550 MT1XP80297 61 aa0.52□□□□□ -2.33
HERPUD1-211ENST00000566550 KRTAP21-1Q3LI58 79 aa0.51□□□□□ -2.33
HERPUD1-211ENST00000566550 KRTAP19-5Q3LI72 72 aa0.5□□□□□ -2.33
HERPUD1-211ENST00000566550 MT1EP04732 61 aa0.47□□□□□ -2.33
HERPUD1-211ENST00000566550 MT1GP13640 62 aa0.46□□□□□ -2.34
HERPUD1-211ENST00000566550 MT1LQ93083 61 aa0.45□□□□□ -2.34
HERPUD1-211ENST00000566550 KRTAP19-7Q3SYF9 63 aa0.44□□□□□ -2.34
HERPUD1-211ENST00000566550 MT1MQ8N339 61 aa0.44□□□□□ -2.34
HERPUD1-211ENST00000566550 MT1AP04731 61 aa0.4□□□□□ -2.35
HERPUD1-211ENST00000566550 KRTAP6-1Q3LI64 71 aa0.37□□□□□ -2.35
HERPUD1-211ENST00000566550 KRTAP6-2Q3LI66 62 aa0.36□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 7.5 ms