RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 NDUFAF8A1L188 74 aa2.41□□□□□ -2.02
SMAD3-209ENST00000558894 P0C880 135 aa2.4□□□□□ -2.03
SMAD3-209ENST00000558894 CRIPTQ9P021 101 aa2.39□□□□□ -2.03
SMAD3-209ENST00000558894 LUZP6Q538Z0 58 aa2.38□□□□□ -2.03
SMAD3-209ENST00000558894 H0YAA0 97 aa2.37□□□□□ -2.03
SMAD3-209ENST00000558894 HMCN1Q96RW7 5635 aa2.37□□□□□ -2.03
SMAD3-209ENST00000558894 CAMK2N1Q7Z7J9 78 aa2.36□□□□□ -2.03
SMAD3-209ENST00000558894 MT1XP80297 61 aa2.35□□□□□ -2.03
SMAD3-209ENST00000558894 KRTAP5-10Q6L8G5 202 aa2.32□□□□□ -2.04
SMAD3-209ENST00000558894 SPINT4Q6UDR6 99 aa2.32□□□□□ -2.04
SMAD3-209ENST00000558894 KRTAP5-7Q6L8G8 165 aa2.3□□□□□ -2.04
SMAD3-209ENST00000558894 SPRR2FQ96RM1 72 aa2.3□□□□□ -2.04
SMAD3-209ENST00000558894 SPRR5A0A1B0GTR4 108 aa2.29□□□□□ -2.04
SMAD3-209ENST00000558894 KRTAP12-2P59991 146 aa2.29□□□□□ -2.04
SMAD3-209ENST00000558894 LCE1AQ5T7P2 110 aa2.29□□□□□ -2.04
SMAD3-209ENST00000558894 AHNAKQ09666 5890 aaKnown RBP2.29□□□□□ -2.04
SMAD3-209ENST00000558894 SPRR2EP22531 72 aa2.27□□□□□ -2.05
SMAD3-209ENST00000558894 SPRR2BP35325 72 aa2.27□□□□□ -2.05
SMAD3-209ENST00000558894 SPRR2AP35326 72 aa2.27□□□□□ -2.05
SMAD3-209ENST00000558894 PRO2289Q9P1D8 64 aa2.27□□□□□ -2.05
SMAD3-209ENST00000558894 KRTAP8-1Q8IUC2 63 aa2.26□□□□□ -2.05
SMAD3-209ENST00000558894 KRTAP10-7P60409 375 aaPredicted RBP2.24□□□□□ -2.05
SMAD3-209ENST00000558894 KRTAP10-12P60413 245 aa2.24□□□□□ -2.05
SMAD3-209ENST00000558894 PLAC4Q8WY50 150 aa2.24□□□□□ -2.05
SMAD3-209ENST00000558894 R4GN34 69 aa2.23□□□□□ -2.05
SMAD3-209ENST00000558894 M0QZ58 72 aa2.22□□□□□ -2.05
SMAD3-209ENST00000558894 A0A1B0GU33 70 aa2.21□□□□□ -2.06
SMAD3-209ENST00000558894 SPRR2DP22532 72 aa2.2□□□□□ -2.06
SMAD3-209ENST00000558894 MT3P25713 68 aa2.18□□□□□ -2.06
SMAD3-209ENST00000558894 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
SMAD3-209ENST00000558894 KRTAP13-4Q3LI77 160 aa2.14□□□□□ -2.07
SMAD3-209ENST00000558894 MUC5ACP98088 5654 aa2.13□□□□□ -2.07
SMAD3-209ENST00000558894 KRTAP19-7Q3SYF9 63 aa2.12□□□□□ -2.07
SMAD3-209ENST00000558894 MT1EP04732 61 aa2.08□□□□□ -2.08
SMAD3-209ENST00000558894 INE1O15225 51 aa2.07□□□□□ -2.08
SMAD3-209ENST00000558894 KRTAP19-3Q7Z4W3 81 aa2.06□□□□□ -2.08
SMAD3-209ENST00000558894 C10orf95Q9H7T3 257 aa2.03□□□□□ -2.08
SMAD3-209ENST00000558894 KRTAP19-5Q3LI72 72 aa2.01□□□□□ -2.09
SMAD3-209ENST00000558894 PP632Q6XCG6 107 aa2.01□□□□□ -2.09
SMAD3-209ENST00000558894 A0A0D9SG42 100 aa2□□□□□ -2.09
SMAD3-209ENST00000558894 MT1GP13640 62 aa2□□□□□ -2.09
SMAD3-209ENST00000558894 KRTAP12-1P59990 96 aa2□□□□□ -2.09
SMAD3-209ENST00000558894 MT1MQ8N339 61 aa1.99□□□□□ -2.09
SMAD3-209ENST00000558894 MT4P47944 62 aa1.97□□□□□ -2.09
SMAD3-209ENST00000558894 MT1LQ93083 61 aa1.97□□□□□ -2.09
SMAD3-209ENST00000558894 KRTAP5-4Q6L8H1 288 aa1.96□□□□□ -2.1
SMAD3-209ENST00000558894 KRTAP4-3Q9BYR4 195 aa1.96□□□□□ -2.1
SMAD3-209ENST00000558894 LCE3AQ5TA76 89 aa1.93□□□□□ -2.1
SMAD3-209ENST00000558894 KRTAP5-5Q701N2 237 aaPredicted RBP1.87□□□□□ -2.11
SMAD3-209ENST00000558894 TNP1P09430 55 aa1.86□□□□□ -2.11
SMAD3-209ENST00000558894 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.85□□□□□ -2.11
SMAD3-209ENST00000558894 SYNE1Q8NF91 8797 aaKnown RBP1.85□□□□□ -2.11
SMAD3-209ENST00000558894 KRTAP12-3P60328 96 aa1.84□□□□□ -2.11
SMAD3-209ENST00000558894 KRTAP20-2Q3LI61 65 aa1.82□□□□□ -2.12
SMAD3-209ENST00000558894 KRTAP5-11Q6L8G4 156 aa1.8□□□□□ -2.12
SMAD3-209ENST00000558894 LCE1FQ5T754 118 aa1.78□□□□□ -2.12
SMAD3-209ENST00000558894 KRTAP5-8O75690 187 aa1.77□□□□□ -2.13
SMAD3-209ENST00000558894 KRTAP12-4P60329 112 aa1.73□□□□□ -2.13
SMAD3-209ENST00000558894 LCE3CQ5T5A8 94 aa1.7□□□□□ -2.14
SMAD3-209ENST00000558894 KRTAP5-2Q701N4 177 aa1.7□□□□□ -2.14
SMAD3-209ENST00000558894 KRTAP6-1Q3LI64 71 aa1.68□□□□□ -2.14
SMAD3-209ENST00000558894 KRTAP9-6A8MVA2 160 aa1.67□□□□□ -2.14
SMAD3-209ENST00000558894 MT1AP04731 61 aa1.67□□□□□ -2.14
SMAD3-209ENST00000558894 OBSCNQ5VST9 7968 aa1.66□□□□□ -2.14
SMAD3-209ENST00000558894 LCE1EQ5T753 118 aa1.64□□□□□ -2.15
SMAD3-209ENST00000558894 KRTAP6-2Q3LI66 62 aa1.61□□□□□ -2.15
SMAD3-209ENST00000558894 KRTAP5-1Q6L8H4 278 aa1.57□□□□□ -2.16
SMAD3-209ENST00000558894 KRTAP4-4Q9BYR3 166 aa1.55□□□□□ -2.16
SMAD3-209ENST00000558894 LCE3EQ5T5B0 92 aa1.52□□□□□ -2.17
SMAD3-209ENST00000558894 LCE3DQ9BYE3 92 aa1.36□□□□□ -2.19
SMAD3-209ENST00000558894 PHGR1C9JFL3 82 aa1.34□□□□□ -2.19
SMAD3-209ENST00000558894 LCE1CQ5T751 118 aa1.33□□□□□ -2.2
SMAD3-209ENST00000558894 LCE1BQ5T7P3 118 aa1.33□□□□□ -2.2
SMAD3-209ENST00000558894 PRM1P04553 51 aa1.18□□□□□ -2.22
SMAD3-209ENST00000558894 KRTAP21-2Q3LI59 83 aa1.13□□□□□ -2.23
SMAD3-209ENST00000558894 MUC19Q7Z5P9 8384 aa1.04□□□□□ -2.24
SMAD3-209ENST00000558894 KRTAP21-1Q3LI58 79 aa1.01□□□□□ -2.25
SMAD3-209ENST00000558894 MUC16Q8WXI7 14507 aa0.71□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 188.5 ms