RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 DEFB105AQ8NG35 78 aa1.6□□□□□ -2.15
MTHFD1-216ENST00000557539 C12orf57Q99622 126 aa1.6□□□□□ -2.15
MTHFD1-216ENST00000557539 UQCR10Q9UDW1 63 aa1.6□□□□□ -2.15
MTHFD1-216ENST00000557539 A0A1W2PPM0 123 aa1.59□□□□□ -2.15
MTHFD1-216ENST00000557539 SMIM6P0DI80 62 aa1.59□□□□□ -2.15
MTHFD1-216ENST00000557539 H3BUT2 72 aa1.58□□□□□ -2.16
MTHFD1-216ENST00000557539 MT1BP07438 61 aa1.58□□□□□ -2.16
MTHFD1-216ENST00000557539 C20orf197Q8N268 126 aa1.58□□□□□ -2.16
MTHFD1-216ENST00000557539 SNHG12Q9BXW3 62 aa1.58□□□□□ -2.16
MTHFD1-216ENST00000557539 LINC00472Q9H8W2 130 aa1.58□□□□□ -2.16
MTHFD1-216ENST00000557539 KLKP1Q107X0 134 aa1.57□□□□□ -2.16
MTHFD1-216ENST00000557539 C9orf92A6NGG3 77 aa1.56□□□□□ -2.16
MTHFD1-216ENST00000557539 M0R143 59 aa1.56□□□□□ -2.16
MTHFD1-216ENST00000557539 COX6CP09669 75 aa1.56□□□□□ -2.16
MTHFD1-216ENST00000557539 Q5VV11 94 aa1.55□□□□□ -2.16
MTHFD1-216ENST00000557539 DSCR8Q96T75 97 aa1.55□□□□□ -2.16
MTHFD1-216ENST00000557539 PLAC4Q8WY50 150 aa1.54□□□□□ -2.16
MTHFD1-216ENST00000557539 HCG22E2RYF7 251 aa1.53□□□□□ -2.16
MTHFD1-216ENST00000557539 ATXN8Q156A1 80 aa1.53□□□□□ -2.16
MTHFD1-216ENST00000557539 GTF2H5Q6ZYL4 71 aa1.52□□□□□ -2.17
MTHFD1-216ENST00000557539 MMP24-AS1A0A0U1RRL7 71 aa1.49□□□□□ -2.17
MTHFD1-216ENST00000557539 PHGR1C9JFL3 82 aa1.49□□□□□ -2.17
MTHFD1-216ENST00000557539 NDUFB1O75438 58 aa1.48□□□□□ -2.17
MTHFD1-216ENST00000557539 SPINK7P58062 85 aa1.48□□□□□ -2.17
MTHFD1-216ENST00000557539 K7EP34 96 aa1.47□□□□□ -2.17
MTHFD1-216ENST00000557539 K7EQZ3 153 aa1.47□□□□□ -2.17
MTHFD1-216ENST00000557539 COL5A1-AS1Q5SY13 56 aa1.47□□□□□ -2.17
MTHFD1-216ENST00000557539 WFDC13Q8IUB5 93 aa1.47□□□□□ -2.17
MTHFD1-216ENST00000557539 MRPL34Q9BQ48 92 aaKnown RBP1.47□□□□□ -2.17
MTHFD1-216ENST00000557539 NREPQ16612 68 aa1.46□□□□□ -2.18
MTHFD1-216ENST00000557539 SPCS1Q9Y6A9 102 aa1.46□□□□□ -2.18
MTHFD1-216ENST00000557539 H1FX-AS1Q4G0G2 97 aa1.43□□□□□ -2.18
MTHFD1-216ENST00000557539 CYP4F30PQ9H0H9 118 aa1.43□□□□□ -2.18
MTHFD1-216ENST00000557539 ACYP1P07311 99 aa1.42□□□□□ -2.18
MTHFD1-216ENST00000557539 ATP5EP56381 51 aaPredicted RBP1.42□□□□□ -2.18
MTHFD1-216ENST00000557539 KRTAP19-8Q3LI54 63 aa1.42□□□□□ -2.18
MTHFD1-216ENST00000557539 UBL5Q9BZL1 73 aa1.42□□□□□ -2.18
MTHFD1-216ENST00000557539 TP53AIP1Q9HCN2 124 aa1.42□□□□□ -2.18
MTHFD1-216ENST00000557539 ETDBQ3ZM63 59 aa1.41□□□□□ -2.18
MTHFD1-216ENST00000557539 ATP5EP2Q5VTU8 51 aa1.41□□□□□ -2.18
MTHFD1-216ENST00000557539 ACYP2P14621 99 aa1.4□□□□□ -2.19
MTHFD1-216ENST00000557539 SPRR2GQ9BYE4 73 aa1.4□□□□□ -2.19
MTHFD1-216ENST00000557539 H0YAA0 97 aa1.38□□□□□ -2.19
MTHFD1-216ENST00000557539 TRAV22A0A0B4J277 110 aa1.37□□□□□ -2.19
MTHFD1-216ENST00000557539 LINC00643Q86TS7 51 aa1.37□□□□□ -2.19
MTHFD1-216ENST00000557539 ATOX1O00244 68 aa1.36□□□□□ -2.19
MTHFD1-216ENST00000557539 KRTAP19-3Q7Z4W3 81 aa1.36□□□□□ -2.19
MTHFD1-216ENST00000557539 CRIPTQ9P021 101 aa1.36□□□□□ -2.19
MTHFD1-216ENST00000557539 S4R3F8 94 aa1.35□□□□□ -2.19
MTHFD1-216ENST00000557539 A0A087WVE0 104 aa1.33□□□□□ -2.2
MTHFD1-216ENST00000557539 A0A0D9SG42 100 aa1.32□□□□□ -2.2
MTHFD1-216ENST00000557539 H0Y9P7 68 aa1.32□□□□□ -2.2
MTHFD1-216ENST00000557539 PRR15LQ9BU68 103 aa1.32□□□□□ -2.2
MTHFD1-216ENST00000557539 CHKB-CPT1BH3BT56 60 aa1.31□□□□□ -2.2
MTHFD1-216ENST00000557539 NDUFC1O43677 76 aa1.3□□□□□ -2.2
MTHFD1-216ENST00000557539 MT1XP80297 61 aa1.29□□□□□ -2.2
MTHFD1-216ENST00000557539 MT-ATP8P03928 68 aa1.26□□□□□ -2.21
MTHFD1-216ENST00000557539 M0QZ58 72 aa1.23□□□□□ -2.21
MTHFD1-216ENST00000557539 UQCR11O14957 56 aa1.23□□□□□ -2.21
MTHFD1-216ENST00000557539 SERP2Q8N6R1 65 aa1.23□□□□□ -2.21
MTHFD1-216ENST00000557539 MT1GP13640 62 aa1.22□□□□□ -2.21
MTHFD1-216ENST00000557539 C10orf95Q9H7T3 257 aa1.22□□□□□ -2.21
MTHFD1-216ENST00000557539 LINC01558Q9Y6Z2 57 aa1.22□□□□□ -2.21
MTHFD1-216ENST00000557539 H7BZZ5 65 aa1.19□□□□□ -2.22
MTHFD1-216ENST00000557539 MT1MQ8N339 61 aa1.19□□□□□ -2.22
MTHFD1-216ENST00000557539 MT1EP04732 61 aa1.18□□□□□ -2.22
MTHFD1-216ENST00000557539 KRTAP19-7Q3SYF9 63 aa1.16□□□□□ -2.22
MTHFD1-216ENST00000557539 SPATA8Q6RVD6 105 aa1.14□□□□□ -2.23
MTHFD1-216ENST00000557539 KRTAP21-1Q3LI58 79 aa1.12□□□□□ -2.23
MTHFD1-216ENST00000557539 A0A1B0GU69 56 aa1.1□□□□□ -2.23
MTHFD1-216ENST00000557539 KRTAP19-5Q3LI72 72 aa1.08□□□□□ -2.24
MTHFD1-216ENST00000557539 MT1LQ93083 61 aa1.08□□□□□ -2.24
MTHFD1-216ENST00000557539 TNP1P09430 55 aa1.06□□□□□ -2.24
MTHFD1-216ENST00000557539 KRTAP6-2Q3LI66 62 aa1.04□□□□□ -2.24
MTHFD1-216ENST00000557539 MT1AP04731 61 aa0.93□□□□□ -2.26
MTHFD1-216ENST00000557539 KRTAP6-1Q3LI64 71 aa0.9□□□□□ -2.27
MTHFD1-216ENST00000557539 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.28
MTHFD1-216ENST00000557539 PRM1P04553 51 aa0.46□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 41.4 ms