RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 SNRPGP62308 76 aaKnown RBP0.04□□□□□ -2.4
SCFD1-221ENST00000556534 H1FX-AS1Q4G0G2 97 aa0.04□□□□□ -2.4
SCFD1-221ENST00000556534 PRLHP81277 87 aa0.03□□□□□ -2.4
SCFD1-221ENST00000556534 PYY3Q5JQD4 70 aa0.03□□□□□ -2.4
SCFD1-221ENST00000556534 ABRACLQ9P1F3 81 aa0.03□□□□□ -2.4
SCFD1-221ENST00000556534 RPL38P63173 70 aaKnown RBP0.02□□□□□ -2.41
SCFD1-221ENST00000556534 LINC01590Q5TEZ4 76 aa0.02□□□□□ -2.41
SCFD1-221ENST00000556534 C9orf62Q8N4C0 152 aa0.02□□□□□ -2.41
SCFD1-221ENST00000556534 NMSQ5H8A3 153 aa0.01□□□□□ -2.41
SCFD1-221ENST00000556534 ARHGAP5-AS1Q96IT6 56 aa0.01□□□□□ -2.41
SCFD1-221ENST00000556534 MRPL34Q9BQ48 92 aaKnown RBP0.01□□□□□ -2.41
SCFD1-221ENST00000556534 WFDC13Q8IUB5 93 aa0□□□□□ -2.41
SCFD1-221ENST00000556534 C6orf48Q9UBA6 75 aa0□□□□□ -2.41
SCFD1-221ENST00000556534 SNRPGP15A8MWD9 76 aa-0.01□□□□□ -2.41
SCFD1-221ENST00000556534 GNG2P59768 71 aa-0.01□□□□□ -2.41
SCFD1-221ENST00000556534 S100A16Q96FQ6 103 aaKnown RBP-0.01□□□□□ -2.41
SCFD1-221ENST00000556534 A0A1B0GUT8 65 aa-0.02□□□□□ -2.41
SCFD1-221ENST00000556534 NDUFA1O15239 70 aa-0.02□□□□□ -2.41
SCFD1-221ENST00000556534 S100A13Q99584 98 aa-0.04□□□□□ -2.42
SCFD1-221ENST00000556534 CMC2Q9NRP2 79 aa-0.04□□□□□ -2.42
SCFD1-221ENST00000556534 TRAV21A0A0B4J279 112 aa-0.05□□□□□ -2.42
SCFD1-221ENST00000556534 MYMXA0A1B0GTQ4 84 aa-0.05□□□□□ -2.42
SCFD1-221ENST00000556534 COX7BP24311 80 aa-0.05□□□□□ -2.42
SCFD1-221ENST00000556534 CRIP1P50238 77 aa-0.06□□□□□ -2.42
SCFD1-221ENST00000556534 KCNQ1DNQ9H478 68 aa-0.06□□□□□ -2.42
SCFD1-221ENST00000556534 S4R3F8 94 aa-0.06□□□□□ -2.42
SCFD1-221ENST00000556534 M0QY20 66 aa-0.07□□□□□ -2.42
SCFD1-221ENST00000556534 LINC00643Q86TS7 51 aa-0.07□□□□□ -2.42
SCFD1-221ENST00000556534 CDKN2A-AS1Q9UH64 79 aa-0.07□□□□□ -2.42
SCFD1-221ENST00000556534 ETDCA0A1B0GVM5 59 aa-0.09□□□□□ -2.42
SCFD1-221ENST00000556534 H3BVH4 76 aa-0.09□□□□□ -2.42
SCFD1-221ENST00000556534 M0QZ58 72 aa-0.09□□□□□ -2.42
SCFD1-221ENST00000556534 C3orf79P0CE67 100 aa-0.09□□□□□ -2.42
SCFD1-221ENST00000556534 CEBPZOSA8MTT3 80 aa-0.1□□□□□ -2.43
SCFD1-221ENST00000556534 IAPPP10997 89 aa-0.1□□□□□ -2.43
SCFD1-221ENST00000556534 IGLV5-48A0A075B6I7 105 aa-0.11□□□□□ -2.43
SCFD1-221ENST00000556534 LINC01546A6NGU7 62 aa-0.11□□□□□ -2.43
SCFD1-221ENST00000556534 NMES1Q9C002 83 aa-0.12□□□□□ -2.43
SCFD1-221ENST00000556534 TOMM7Q9P0U1 55 aa-0.13□□□□□ -2.43
SCFD1-221ENST00000556534 KANTRA0A1W2PQU2 76 aa-0.14□□□□□ -2.43
SCFD1-221ENST00000556534 ACYP1P07311 99 aa-0.14□□□□□ -2.43
SCFD1-221ENST00000556534 POLR2KP53803 58 aaKnown RBP-0.14□□□□□ -2.43
SCFD1-221ENST00000556534 RPL39LQ96EH5 51 aaKnown RBP-0.15□□□□□ -2.43
SCFD1-221ENST00000556534 NDUFB1O75438 58 aa-0.16□□□□□ -2.44
SCFD1-221ENST00000556534 SMIM2Q9BVW6 85 aa-0.16□□□□□ -2.44
SCFD1-221ENST00000556534 TNP1P09430 55 aa-0.17□□□□□ -2.44
SCFD1-221ENST00000556534 RPL39P62891 51 aaKnown RBP-0.17□□□□□ -2.44
SCFD1-221ENST00000556534 ST20Q9HBF5 79 aa-0.17□□□□□ -2.44
SCFD1-221ENST00000556534 PDCD5O14737 125 aa-0.18□□□□□ -2.44
SCFD1-221ENST00000556534 FCER1GP30273 86 aa-0.18□□□□□ -2.44
SCFD1-221ENST00000556534 ADIRFQ15847 76 aa-0.19□□□□□ -2.44
SCFD1-221ENST00000556534 A0A087WXM4 84 aa-0.2□□□□□ -2.44
SCFD1-221ENST00000556534 IFI27P40305 119 aaPredicted RBP-0.2□□□□□ -2.44
SCFD1-221ENST00000556534 LINC00158P58513 81 aa-0.2□□□□□ -2.44
SCFD1-221ENST00000556534 MMP24-AS1A0A0U1RRL7 71 aa-0.21□□□□□ -2.44
SCFD1-221ENST00000556534 IGIPA6NJ69 53 aa-0.21□□□□□ -2.44
SCFD1-221ENST00000556534 UMAD1C9J7I0 102 aa-0.22□□□□□ -2.44
SCFD1-221ENST00000556534 H3BUT2 72 aa-0.22□□□□□ -2.44
SCFD1-221ENST00000556534 SMIM13P0DJ93 91 aa-0.22□□□□□ -2.44
SCFD1-221ENST00000556534 ATP5EP2Q5VTU8 51 aa-0.24□□□□□ -2.45
SCFD1-221ENST00000556534 TMEM167BQ9NRX6 74 aa-0.24□□□□□ -2.45
SCFD1-221ENST00000556534 NREPQ16612 68 aa-0.26□□□□□ -2.45
SCFD1-221ENST00000556534 BVES-AS1Q5T3Y7 98 aa-0.26□□□□□ -2.45
SCFD1-221ENST00000556534 K7EMI3 77 aa-0.28□□□□□ -2.45
SCFD1-221ENST00000556534 SMIM31A0A1B0GVY4 71 aa-0.29□□□□□ -2.46
SCFD1-221ENST00000556534 LINC01549A6NIU2 74 aa-0.3□□□□□ -2.46
SCFD1-221ENST00000556534 SERF2P84101 59 aa-0.3□□□□□ -2.46
SCFD1-221ENST00000556534 LINC00308Q8TCZ7 52 aa-0.3□□□□□ -2.46
SCFD1-221ENST00000556534 SMIM27A0A1W2PRY6 76 aa-0.31□□□□□ -2.46
SCFD1-221ENST00000556534 C18orf32Q8TCD1 76 aa-0.35□□□□□ -2.47
SCFD1-221ENST00000556534 S100ZQ8WXG8 99 aa-0.36□□□□□ -2.47
SCFD1-221ENST00000556534 PLNP26678 52 aa-0.37□□□□□ -2.47
SCFD1-221ENST00000556534 H0YGX0 51 aa-0.38□□□□□ -2.47
SCFD1-221ENST00000556534 TOMM5Q8N4H5 51 aa-0.38□□□□□ -2.47
SCFD1-221ENST00000556534 GNG13Q9P2W3 67 aa-0.38□□□□□ -2.47
SCFD1-221ENST00000556534 UBL5Q9BZL1 73 aa-0.4□□□□□ -2.47
SCFD1-221ENST00000556534 SMCO4Q9NRQ5 59 aa-0.41□□□□□ -2.48
SCFD1-221ENST00000556534 ATXN8Q156A1 80 aa-0.51□□□□□ -2.49
Retrieved 78 of 20,778 RNA–protein pairs in 10.2 ms