RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 NOP10Q9NPE3 64 aaKnown RBP-0.59□□□□□ -2.5
SCFD1-213ENST00000554776 PRXQ9BXM0 1461 aa-0.6□□□□□ -2.5
SCFD1-213ENST00000554776 CEBPZOSA8MTT3 80 aa-0.6□□□□□ -2.51
SCFD1-213ENST00000554776 NDUFA4O00483 81 aa-0.6□□□□□ -2.51
SCFD1-213ENST00000554776 DEFB131AP59861 70 aa-0.6□□□□□ -2.51
SCFD1-213ENST00000554776 LINC00643Q86TS7 51 aa-0.6□□□□□ -2.51
SCFD1-213ENST00000554776 HILPDAQ9Y5L2 63 aa-0.6□□□□□ -2.51
SCFD1-213ENST00000554776 ANKARQ7Z5J8 1434 aa-0.61□□□□□ -2.51
SCFD1-213ENST00000554776 IAPPP10997 89 aa-0.61□□□□□ -2.51
SCFD1-213ENST00000554776 NCBP2-AS2Q69YL0 99 aa-0.61□□□□□ -2.51
SCFD1-213ENST00000554776 KAAG1Q9UBP8 84 aa-0.61□□□□□ -2.51
SCFD1-213ENST00000554776 HFM1A2PYH4 1435 aa-0.62□□□□□ -2.51
SCFD1-213ENST00000554776 PVALEFA0A1B0GWK0 134 aa-0.62□□□□□ -2.51
SCFD1-213ENST00000554776 C3orf79P0CE67 100 aa-0.62□□□□□ -2.51
SCFD1-213ENST00000554776 COX14Q96I36 57 aa-0.62□□□□□ -2.51
SCFD1-213ENST00000554776 ETDCA0A1B0GVM5 59 aa-0.63□□□□□ -2.51
SCFD1-213ENST00000554776 LINC00158P58513 81 aa-0.63□□□□□ -2.51
SCFD1-213ENST00000554776 SMIM2Q9BVW6 85 aa-0.63□□□□□ -2.51
SCFD1-213ENST00000554776 TOMM7Q9P0U1 55 aa-0.63□□□□□ -2.51
SCFD1-213ENST00000554776 C6orf48Q9UBA6 75 aa-0.63□□□□□ -2.51
SCFD1-213ENST00000554776 GCC2Q8IWJ2 1684 aa-0.64□□□□□ -2.51
SCFD1-213ENST00000554776 H3BUT2 72 aa-0.64□□□□□ -2.51
SCFD1-213ENST00000554776 FCER1GP30273 86 aa-0.64□□□□□ -2.51
SCFD1-213ENST00000554776 NDUFA1O15239 70 aa-0.65□□□□□ -2.51
SCFD1-213ENST00000554776 IFI6P09912 130 aa-0.65□□□□□ -2.51
SCFD1-213ENST00000554776 TMEM167AQ8TBQ9 72 aa-0.65□□□□□ -2.51
SCFD1-213ENST00000554776 ABRACLQ9P1F3 81 aa-0.65□□□□□ -2.51
SCFD1-213ENST00000554776 H3BUA1 57 aa-0.66□□□□□ -2.52
SCFD1-213ENST00000554776 NDUFB1O75438 58 aa-0.66□□□□□ -2.52
SCFD1-213ENST00000554776 LINC01590Q5TEZ4 76 aa-0.66□□□□□ -2.52
SCFD1-213ENST00000554776 A0A087WWC5 75 aa-0.67□□□□□ -2.52
SCFD1-213ENST00000554776 PRCDQ00LT1 54 aa-0.67□□□□□ -2.52
SCFD1-213ENST00000554776 MINOS1Q5TGZ0 78 aa-0.67□□□□□ -2.52
SCFD1-213ENST00000554776 Q9Y3F1 56 aa-0.67□□□□□ -2.52
SCFD1-213ENST00000554776 A0A087WXM4 84 aa-0.68□□□□□ -2.52
SCFD1-213ENST00000554776 SMIM27A0A1W2PRY6 76 aa-0.68□□□□□ -2.52
SCFD1-213ENST00000554776 M0R1W7 72 aa-0.68□□□□□ -2.52
SCFD1-213ENST00000554776 BVES-AS1Q5T3Y7 98 aa-0.68□□□□□ -2.52
SCFD1-213ENST00000554776 PDCD5O14737 125 aa-0.69□□□□□ -2.52
SCFD1-213ENST00000554776 NMES1Q9C002 83 aa-0.69□□□□□ -2.52
SCFD1-213ENST00000554776 KANTRA0A1W2PQU2 76 aa-0.7□□□□□ -2.52
SCFD1-213ENST00000554776 UMAD1C9J7I0 102 aa-0.7□□□□□ -2.52
SCFD1-213ENST00000554776 MRPL33O75394 65 aaKnown RBP-0.7□□□□□ -2.52
SCFD1-213ENST00000554776 KCNQ1DNQ9H478 68 aa-0.7□□□□□ -2.52
SCFD1-213ENST00000554776 K7EMI3 77 aa-0.71□□□□□ -2.52
SCFD1-213ENST00000554776 IFI27P40305 119 aaPredicted RBP-0.71□□□□□ -2.52
SCFD1-213ENST00000554776 CRIP1P50238 77 aa-0.71□□□□□ -2.52
SCFD1-213ENST00000554776 H3BVH4 76 aa-0.72□□□□□ -2.52
SCFD1-213ENST00000554776 SMIM13P0DJ93 91 aa-0.72□□□□□ -2.52
SCFD1-213ENST00000554776 GNG2P59768 71 aa-0.72□□□□□ -2.52
SCFD1-213ENST00000554776 RPL39P5Q59GN2 51 aa-0.72□□□□□ -2.52
SCFD1-213ENST00000554776 RPL39P62891 51 aaKnown RBP-0.73□□□□□ -2.53
SCFD1-213ENST00000554776 RPL39LQ96EH5 51 aaKnown RBP-0.73□□□□□ -2.53
SCFD1-213ENST00000554776 K7EIM0 57 aa-0.74□□□□□ -2.53
SCFD1-213ENST00000554776 NREPQ16612 68 aa-0.74□□□□□ -2.53
SCFD1-213ENST00000554776 LINC00308Q8TCZ7 52 aa-0.74□□□□□ -2.53
SCFD1-213ENST00000554776 ARHGAP5-AS1Q96IT6 56 aa-0.74□□□□□ -2.53
SCFD1-213ENST00000554776 ST20Q9HBF5 79 aa-0.76□□□□□ -2.53
SCFD1-213ENST00000554776 ADIRFQ15847 76 aa-0.77□□□□□ -2.53
SCFD1-213ENST00000554776 ATP5EP2Q5VTU8 51 aa-0.78□□□□□ -2.53
SCFD1-213ENST00000554776 UBL5Q9BZL1 73 aa-0.78□□□□□ -2.53
SCFD1-213ENST00000554776 SNRPGP15A8MWD9 76 aa-0.79□□□□□ -2.54
SCFD1-213ENST00000554776 TMEM167BQ9NRX6 74 aa-0.79□□□□□ -2.54
SCFD1-213ENST00000554776 SNRPGP62308 76 aaKnown RBP-0.8□□□□□ -2.54
SCFD1-213ENST00000554776 S100A13Q99584 98 aa-0.8□□□□□ -2.54
SCFD1-213ENST00000554776 S100ZQ8WXG8 99 aa-0.82□□□□□ -2.54
SCFD1-213ENST00000554776 IGIPA6NJ69 53 aa-0.83□□□□□ -2.54
SCFD1-213ENST00000554776 H0YGX0 51 aa-0.84□□□□□ -2.54
SCFD1-213ENST00000554776 PLNP26678 52 aa-0.85□□□□□ -2.55
SCFD1-213ENST00000554776 LINC01549A6NIU2 74 aa-0.87□□□□□ -2.55
SCFD1-213ENST00000554776 ATXN8Q156A1 80 aa-0.87□□□□□ -2.55
SCFD1-213ENST00000554776 SMCO4Q9NRQ5 59 aa-0.87□□□□□ -2.55
SCFD1-213ENST00000554776 GNG13Q9P2W3 67 aa-0.87□□□□□ -2.55
SCFD1-213ENST00000554776 SERF2P84101 59 aa-0.88□□□□□ -2.55
SCFD1-213ENST00000554776 C18orf32Q8TCD1 76 aa-0.92□□□□□ -2.56
SCFD1-213ENST00000554776 CMC2Q9NRP2 79 aa-0.93□□□□□ -2.56
SCFD1-213ENST00000554776 SMIM31A0A1B0GVY4 71 aa-0.99□□□□□ -2.57
SCFD1-213ENST00000554776 TOMM5Q8N4H5 51 aa-1.01□□□□□ -2.57
Retrieved 78 of 20,778 RNA–protein pairs in 8.4 ms