RNA–Protein interactions for RNA: ENST00000553384.5

RDH11-203, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best) BASIC

Gene RDH11, Length 1,926 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-203ENST00000553384 CAMK2N1Q7Z7J9 78 aa3.15□□□□□ -1.9
RDH11-203ENST00000553384 KMT2DO14686 5537 aa3.14□□□□□ -1.91
RDH11-203ENST00000553384 MDN1Q9NU22 5596 aa3.13□□□□□ -1.91
RDH11-203ENST00000553384 KRTAP19-8Q3LI54 63 aa3.11□□□□□ -1.91
RDH11-203ENST00000553384 MT1BP07438 61 aa3.11□□□□□ -1.91
RDH11-203ENST00000553384 KRTAP23-1A1A580 65 aa3.09□□□□□ -1.91
RDH11-203ENST00000553384 KRTAP10-5P60370 271 aa3.09□□□□□ -1.91
RDH11-203ENST00000553384 NDUFAF8A1L188 74 aa3.07□□□□□ -1.92
RDH11-203ENST00000553384 PLAC4Q8WY50 150 aa3.06□□□□□ -1.92
RDH11-203ENST00000553384 KRTAP2-2Q9BYT5 123 aa3.05□□□□□ -1.92
RDH11-203ENST00000553384 KRTAP2-1Q9BYU5 128 aa3.05□□□□□ -1.92
RDH11-203ENST00000553384 TNP1P09430 55 aa3.03□□□□□ -1.92
RDH11-203ENST00000553384 PRO2289Q9P1D8 64 aa3.02□□□□□ -1.93
RDH11-203ENST00000553384 SPRR2EP22531 72 aa3.01□□□□□ -1.93
RDH11-203ENST00000553384 SPRR2BP35325 72 aa3.01□□□□□ -1.93
RDH11-203ENST00000553384 SPRR2AP35326 72 aa3.01□□□□□ -1.93
RDH11-203ENST00000553384 SPRR2FQ96RM1 72 aa2.99□□□□□ -1.93
RDH11-203ENST00000553384 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.99□□□□□ -1.93
RDH11-203ENST00000553384 LUZP6Q538Z0 58 aa2.98□□□□□ -1.93
RDH11-203ENST00000553384 LCE1AQ5T7P2 110 aa2.95□□□□□ -1.94
RDH11-203ENST00000553384 MT1XP80297 61 aa2.94□□□□□ -1.94
RDH11-203ENST00000553384 A0A0A0MQY5 61 aa2.93□□□□□ -1.94
RDH11-203ENST00000553384 SPRR2DP22532 72 aa2.91□□□□□ -1.94
RDH11-203ENST00000553384 KRTAP8-1Q8IUC2 63 aa2.91□□□□□ -1.94
RDH11-203ENST00000553384 SPRR5A0A1B0GTR4 108 aa2.9□□□□□ -1.95
RDH11-203ENST00000553384 GPR98Q8WXG9 6306 aa2.89□□□□□ -1.95
RDH11-203ENST00000553384 LCE3AQ5TA76 89 aa2.87□□□□□ -1.95
RDH11-203ENST00000553384 KRTAP10-7P60409 375 aaPredicted RBP2.82□□□□□ -1.96
RDH11-203ENST00000553384 DSTQ03001 7570 aaKnown RBP2.8□□□□□ -1.96
RDH11-203ENST00000553384 KRTAP10-12P60413 245 aa2.8□□□□□ -1.96
RDH11-203ENST00000553384 KRTAP12-3P60328 96 aa2.74□□□□□ -1.97
RDH11-203ENST00000553384 KRTAP5-11Q6L8G4 156 aa2.68□□□□□ -1.98
RDH11-203ENST00000553384 KRTAP19-5Q3LI72 72 aa2.65□□□□□ -1.99
RDH11-203ENST00000553384 INE1O15225 51 aa2.64□□□□□ -1.99
RDH11-203ENST00000553384 KRTAP19-7Q3SYF9 63 aa2.62□□□□□ -1.99
RDH11-203ENST00000553384 MT1EP04732 61 aa2.6□□□□□ -1.99
RDH11-203ENST00000553384 KRTAP5-10Q6L8G5 202 aa2.6□□□□□ -1.99
RDH11-203ENST00000553384 LCE3CQ5T5A8 94 aa2.58□□□□□ -2
RDH11-203ENST00000553384 KRTAP19-3Q7Z4W3 81 aa2.58□□□□□ -2
RDH11-203ENST00000553384 HMCN1Q96RW7 5635 aa2.58□□□□□ -2
RDH11-203ENST00000553384 AHNAK2Q8IVF2 5795 aa2.55□□□□□ -2
RDH11-203ENST00000553384 MT4P47944 62 aa2.55□□□□□ -2
RDH11-203ENST00000553384 LCE1EQ5T753 118 aa2.55□□□□□ -2
RDH11-203ENST00000553384 KRTAP5-7Q6L8G8 165 aa2.54□□□□□ -2
RDH11-203ENST00000553384 MT1GP13640 62 aa2.54□□□□□ -2
RDH11-203ENST00000553384 KRTAP5-4Q6L8H1 288 aa2.52□□□□□ -2.01
RDH11-203ENST00000553384 MT1LQ93083 61 aa2.5□□□□□ -2.01
RDH11-203ENST00000553384 MT1MQ8N339 61 aa2.48□□□□□ -2.01
RDH11-203ENST00000553384 KRTAP5-1Q6L8H4 278 aa2.46□□□□□ -2.02
RDH11-203ENST00000553384 KRTAP9-6A8MVA2 160 aa2.46□□□□□ -2.02
RDH11-203ENST00000553384 KRTAP4-3Q9BYR4 195 aa2.42□□□□□ -2.02
RDH11-203ENST00000553384 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
RDH11-203ENST00000553384 KRTAP20-2Q3LI61 65 aa2.35□□□□□ -2.03
RDH11-203ENST00000553384 KRTAP12-4P60329 112 aa2.29□□□□□ -2.04
RDH11-203ENST00000553384 KRTAP5-5Q701N2 237 aaPredicted RBP2.27□□□□□ -2.05
RDH11-203ENST00000553384 SYNE1Q8NF91 8797 aaKnown RBP2.22□□□□□ -2.05
RDH11-203ENST00000553384 AHNAKQ09666 5890 aaKnown RBP2.18□□□□□ -2.06
RDH11-203ENST00000553384 MUC5ACP98088 5654 aa2.18□□□□□ -2.06
RDH11-203ENST00000553384 MUC5BQ9HC84 5762 aaPredicted RBP2.15□□□□□ -2.06
RDH11-203ENST00000553384 KRTAP5-8O75690 187 aa2.15□□□□□ -2.07
RDH11-203ENST00000553384 KRTAP5-2Q701N4 177 aa2.14□□□□□ -2.07
RDH11-203ENST00000553384 MT1AP04731 61 aa2.13□□□□□ -2.07
RDH11-203ENST00000553384 KRTAP6-1Q3LI64 71 aa2.12□□□□□ -2.07
RDH11-203ENST00000553384 OBSCNQ5VST9 7968 aa2.1□□□□□ -2.07
RDH11-203ENST00000553384 MT3P25713 68 aa2.03□□□□□ -2.08
RDH11-203ENST00000553384 KRTAP6-2Q3LI66 62 aa2.02□□□□□ -2.09
RDH11-203ENST00000553384 LCE3DQ9BYE3 92 aa1.97□□□□□ -2.09
RDH11-203ENST00000553384 LCE3EQ5T5B0 92 aa1.95□□□□□ -2.1
RDH11-203ENST00000553384 LCE1FQ5T754 118 aa1.87□□□□□ -2.11
RDH11-203ENST00000553384 PRM1P04553 51 aa1.8□□□□□ -2.12
RDH11-203ENST00000553384 LCE1BQ5T7P3 118 aa1.7□□□□□ -2.14
RDH11-203ENST00000553384 LCE1CQ5T751 118 aa1.68□□□□□ -2.14
RDH11-203ENST00000553384 PHGR1C9JFL3 82 aa1.51□□□□□ -2.17
RDH11-203ENST00000553384 KRTAP21-2Q3LI59 83 aa1.38□□□□□ -2.19
RDH11-203ENST00000553384 MUC19Q7Z5P9 8384 aa1.3□□□□□ -2.2
RDH11-203ENST00000553384 KRTAP21-1Q3LI58 79 aa1.19□□□□□ -2.22
RDH11-203ENST00000553384 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 140.1 ms