RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 HIGD1BQ9P298 99 aa1.27□□□□□ -2.21
LIMA1-208ENST00000551691 SPCS1Q9Y6A9 102 aa1.27□□□□□ -2.21
LIMA1-208ENST00000551691 SMIM27A0A1W2PRY6 76 aa1.26□□□□□ -2.21
LIMA1-208ENST00000551691 HCG22E2RYF7 251 aa1.26□□□□□ -2.21
LIMA1-208ENST00000551691 SYS1-DBNDD2H3BUS1 97 aa1.26□□□□□ -2.21
LIMA1-208ENST00000551691 C3orf79P0CE67 100 aa1.26□□□□□ -2.21
LIMA1-208ENST00000551691 COX7BP24311 80 aa1.26□□□□□ -2.21
LIMA1-208ENST00000551691 ELOF1P60002 83 aaKnown RBP1.26□□□□□ -2.21
LIMA1-208ENST00000551691 BVES-AS1Q5T3Y7 98 aa1.26□□□□□ -2.21
LIMA1-208ENST00000551691 TMEM170BQ5T4T1 132 aa1.26□□□□□ -2.21
LIMA1-208ENST00000551691 PLAC4Q8WY50 150 aa1.26□□□□□ -2.21
LIMA1-208ENST00000551691 IGLV5-48A0A075B6I7 105 aa1.25□□□□□ -2.21
LIMA1-208ENST00000551691 H3BUT2 72 aa1.25□□□□□ -2.21
LIMA1-208ENST00000551691 KRTAP19-3Q7Z4W3 81 aa1.25□□□□□ -2.21
LIMA1-208ENST00000551691 SYNE1Q8NF91 8797 aaKnown RBP1.24□□□□□ -2.21
LIMA1-208ENST00000551691 PLNP26678 52 aa1.24□□□□□ -2.21
LIMA1-208ENST00000551691 MYMXA0A1B0GTQ4 84 aa1.23□□□□□ -2.21
LIMA1-208ENST00000551691 ATXN8Q156A1 80 aa1.23□□□□□ -2.21
LIMA1-208ENST00000551691 ATOX1O00244 68 aa1.22□□□□□ -2.21
LIMA1-208ENST00000551691 NDUFC1O43677 76 aa1.22□□□□□ -2.21
LIMA1-208ENST00000551691 ATP5EP56381 51 aaPredicted RBP1.22□□□□□ -2.21
LIMA1-208ENST00000551691 KRTAP19-7Q3SYF9 63 aa1.22□□□□□ -2.21
LIMA1-208ENST00000551691 ETDBQ3ZM63 59 aa1.22□□□□□ -2.21
LIMA1-208ENST00000551691 LINC00643Q86TS7 51 aa1.22□□□□□ -2.21
LIMA1-208ENST00000551691 CYP4F30PQ9H0H9 118 aa1.22□□□□□ -2.21
LIMA1-208ENST00000551691 PRO1854Q9UHT4 67 aa1.22□□□□□ -2.21
LIMA1-208ENST00000551691 F8WEM9 126 aa1.21□□□□□ -2.22
LIMA1-208ENST00000551691 H0YAA0 97 aa1.21□□□□□ -2.22
LIMA1-208ENST00000551691 MT1EP04732 61 aa1.21□□□□□ -2.22
LIMA1-208ENST00000551691 SFTA2Q6UW10 78 aa1.21□□□□□ -2.22
LIMA1-208ENST00000551691 hADV29S1A0JD25 119 aa1.2□□□□□ -2.22
LIMA1-208ENST00000551691 LINC01546A6NGU7 62 aa1.2□□□□□ -2.22
LIMA1-208ENST00000551691 H0YGX0 51 aa1.2□□□□□ -2.22
LIMA1-208ENST00000551691 ACYP2P14621 99 aa1.2□□□□□ -2.22
LIMA1-208ENST00000551691 Q6JHZ5 121 aa1.2□□□□□ -2.22
LIMA1-208ENST00000551691 ZNF815PA8K554 130 aa1.19□□□□□ -2.22
LIMA1-208ENST00000551691 ATP5EP2Q5VTU8 51 aa1.19□□□□□ -2.22
LIMA1-208ENST00000551691 MT1MQ8N339 61 aa1.18□□□□□ -2.22
LIMA1-208ENST00000551691 SERP2Q8N6R1 65 aa1.18□□□□□ -2.22
LIMA1-208ENST00000551691 PRR15LQ9BU68 103 aa1.18□□□□□ -2.22
LIMA1-208ENST00000551691 NDUFB1O75438 58 aa1.17□□□□□ -2.22
LIMA1-208ENST00000551691 MT-ATP8P03928 68 aa1.17□□□□□ -2.22
LIMA1-208ENST00000551691 MT1GP13640 62 aa1.17□□□□□ -2.22
LIMA1-208ENST00000551691 SMIM11BQ8TCY0 68 aa1.17□□□□□ -2.22
LIMA1-208ENST00000551691 UBL5Q9BZL1 73 aa1.17□□□□□ -2.22
LIMA1-208ENST00000551691 LINC00308Q8TCZ7 52 aa1.16□□□□□ -2.22
LIMA1-208ENST00000551691 CRIPTQ9P021 101 aa1.16□□□□□ -2.22
LIMA1-208ENST00000551691 MUSTN1Q8IVN3 82 aa1.15□□□□□ -2.23
LIMA1-208ENST00000551691 S4R3F8 94 aa1.15□□□□□ -2.23
LIMA1-208ENST00000551691 LINC00472Q9H8W2 130 aa1.14□□□□□ -2.23
LIMA1-208ENST00000551691 CHKB-CPT1BH3BT56 60 aa1.13□□□□□ -2.23
LIMA1-208ENST00000551691 A0A087WVE0 104 aa1.12□□□□□ -2.23
LIMA1-208ENST00000551691 KRTAP19-5Q3LI72 72 aa1.11□□□□□ -2.23
LIMA1-208ENST00000551691 NREPQ16612 68 aa1.1□□□□□ -2.23
LIMA1-208ENST00000551691 MT1LQ93083 61 aa1.1□□□□□ -2.23
LIMA1-208ENST00000551691 H7BZZ5 65 aa1.09□□□□□ -2.23
LIMA1-208ENST00000551691 UQCR11O14957 56 aa1.08□□□□□ -2.24
LIMA1-208ENST00000551691 TP53AIP1Q9HCN2 124 aa1.08□□□□□ -2.24
LIMA1-208ENST00000551691 TRBV7-4A0A0J9YYF1 115 aa1.06□□□□□ -2.24
LIMA1-208ENST00000551691 K7EQZ3 153 aa1.06□□□□□ -2.24
LIMA1-208ENST00000551691 TRAV22A0A0B4J277 110 aa1.05□□□□□ -2.24
LIMA1-208ENST00000551691 A0A0D9SG42 100 aa1.05□□□□□ -2.24
LIMA1-208ENST00000551691 LINC01558Q9Y6Z2 57 aa1.04□□□□□ -2.24
LIMA1-208ENST00000551691 M0QZ58 72 aa1.03□□□□□ -2.24
LIMA1-208ENST00000551691 SPATA8Q6RVD6 105 aa1.03□□□□□ -2.24
LIMA1-208ENST00000551691 C10orf95Q9H7T3 257 aa1.03□□□□□ -2.24
LIMA1-208ENST00000551691 MRPL34Q9BQ48 92 aaKnown RBP1.02□□□□□ -2.25
LIMA1-208ENST00000551691 A0A1B0GU69 56 aa1.01□□□□□ -2.25
LIMA1-208ENST00000551691 H0Y9P7 68 aa1.01□□□□□ -2.25
LIMA1-208ENST00000551691 MMP24-AS1A0A0U1RRL7 71 aa1□□□□□ -2.25
LIMA1-208ENST00000551691 KRTAP6-2Q3LI66 62 aa1□□□□□ -2.25
LIMA1-208ENST00000551691 KRTAP6-1Q3LI64 71 aa0.98□□□□□ -2.25
LIMA1-208ENST00000551691 PHGR1C9JFL3 82 aa0.95□□□□□ -2.26
LIMA1-208ENST00000551691 MT1AP04731 61 aa0.9□□□□□ -2.27
LIMA1-208ENST00000551691 TNP1P09430 55 aa0.77□□□□□ -2.29
LIMA1-208ENST00000551691 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
LIMA1-208ENST00000551691 KRTAP21-1Q3LI58 79 aa0.68□□□□□ -2.3
LIMA1-208ENST00000551691 PRM1P04553 51 aa0.43□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 42.6 ms