RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 TLN2Q9Y4G6 2542 aa-0.1□□□□□ -2.42
CCDC38-208ENST00000549876 ITPR1Q14643 2758 aa-0.1□□□□□ -2.42
CCDC38-208ENST00000549876 CRYBG3Q68DQ2 2970 aa-0.1□□□□□ -2.43
CCDC38-208ENST00000549876 SPART-AS1P0CW21 52 aa-0.1□□□□□ -2.43
CCDC38-208ENST00000549876 KRTAP19-8Q3LI54 63 aa-0.1□□□□□ -2.43
CCDC38-208ENST00000549876 KRTAP20-1Q3LI63 56 aa-0.1□□□□□ -2.43
CCDC38-208ENST00000549876 DNAH14Q0VDD8 3507 aa-0.1□□□□□ -2.43
CCDC38-208ENST00000549876 LRBAP50851 2863 aa-0.1□□□□□ -2.43
CCDC38-208ENST00000549876 TEX15Q9BXT5 2789 aa-0.11□□□□□ -2.43
CCDC38-208ENST00000549876 CFAP46Q8IYW2 2715 aa-0.11□□□□□ -2.43
CCDC38-208ENST00000549876 DOPEY1Q5JWR5 2465 aa-0.11□□□□□ -2.43
CCDC38-208ENST00000549876 ITPR2Q14571 2701 aa-0.11□□□□□ -2.43
CCDC38-208ENST00000549876 TOP2AP11388 1531 aaKnown RBP-0.12□□□□□ -2.43
CCDC38-208ENST00000549876 ITPR3Q14573 2671 aa-0.12□□□□□ -2.43
CCDC38-208ENST00000549876 SMR3BP02814 79 aaPredicted RBP-0.12□□□□□ -2.43
CCDC38-208ENST00000549876 DEFB1P60022 68 aa-0.12□□□□□ -2.43
CCDC38-208ENST00000549876 MT1HP80294 61 aa-0.12□□□□□ -2.43
CCDC38-208ENST00000549876 KRTAP19-6Q3LI70 58 aa-0.12□□□□□ -2.43
CCDC38-208ENST00000549876 CMYA5Q8N3K9 4069 aa-0.12□□□□□ -2.43
CCDC38-208ENST00000549876 SPTBN5Q9NRC6 3674 aaKnown RBP-0.12□□□□□ -2.43
CCDC38-208ENST00000549876 MT1BP07438 61 aa-0.13□□□□□ -2.43
CCDC38-208ENST00000549876 DMDP11532 3685 aa-0.14□□□□□ -2.43
CCDC38-208ENST00000549876 SMG1Q96Q15 3661 aaKnown RBP-0.14□□□□□ -2.43
CCDC38-208ENST00000549876 USP9YO00507 2555 aaPredicted RBP-0.14□□□□□ -2.43
CCDC38-208ENST00000549876 USP9XQ93008 2570 aaPredicted RBP-0.14□□□□□ -2.43
CCDC38-208ENST00000549876 CEP295Q9C0D2 2601 aa-0.14□□□□□ -2.43
CCDC38-208ENST00000549876 CENPEQ02224 2701 aa-0.15□□□□□ -2.43
CCDC38-208ENST00000549876 MT1HL1P0DM35 61 aa-0.15□□□□□ -2.43
CCDC38-208ENST00000549876 MT1XP80297 61 aa-0.15□□□□□ -2.43
CCDC38-208ENST00000549876 MT1MQ8N339 61 aa-0.15□□□□□ -2.43
CCDC38-208ENST00000549876 MT2AP02795 61 aa-0.16□□□□□ -2.44
CCDC38-208ENST00000549876 MT1EP04732 61 aa-0.16□□□□□ -2.44
CCDC38-208ENST00000549876 MT1FP04733 61 aa-0.16□□□□□ -2.44
CCDC38-208ENST00000549876 MT1GP13640 62 aa-0.16□□□□□ -2.44
CCDC38-208ENST00000549876 KRTAP19-2Q3LHN2 52 aa-0.16□□□□□ -2.44
CCDC38-208ENST00000549876 MT1LQ93083 61 aa-0.16□□□□□ -2.44
CCDC38-208ENST00000549876 MYO9AB2RTY4 2548 aa-0.16□□□□□ -2.44
CCDC38-208ENST00000549876 TRRAPQ9Y4A5 3859 aa-0.17□□□□□ -2.44
CCDC38-208ENST00000549876 TLN1Q9Y490 2541 aaKnown RBP-0.18□□□□□ -2.44
CCDC38-208ENST00000549876 VPS13CQ709C8 3753 aa-0.19□□□□□ -2.44
CCDC38-208ENST00000549876 MROH2BQ7Z745 1585 aa-0.2□□□□□ -2.44
CCDC38-208ENST00000549876 DEFB4AO15263 64 aa-0.22□□□□□ -2.44
CCDC38-208ENST00000549876 RPS29P62273 56 aaKnown RBP-0.22□□□□□ -2.44
CCDC38-208ENST00000549876 SPTAN1Q13813 2472 aaKnown RBP-0.22□□□□□ -2.44
CCDC38-208ENST00000549876 RPL39P62891 51 aaKnown RBP-0.23□□□□□ -2.45
CCDC38-208ENST00000549876 LEAP2Q969E1 77 aa-0.23□□□□□ -2.45
CCDC38-208ENST00000549876 TOMM7Q9P0U1 55 aa-0.23□□□□□ -2.45
CCDC38-208ENST00000549876 CEP250Q9BV73 2442 aa-0.23□□□□□ -2.45
CCDC38-208ENST00000549876 DUOX1Q9NRD9 1551 aa-0.23□□□□□ -2.45
CCDC38-208ENST00000549876 DEFB136Q30KP8 78 aa-0.24□□□□□ -2.45
CCDC38-208ENST00000549876 LINC01590Q5TEZ4 76 aa-0.25□□□□□ -2.45
CCDC38-208ENST00000549876 GCC2Q8IWJ2 1684 aa-0.25□□□□□ -2.45
CCDC38-208ENST00000549876 SNRPGP62308 76 aaKnown RBP-0.26□□□□□ -2.45
CCDC38-208ENST00000549876 DEFB104AQ8WTQ1 72 aa-0.27□□□□□ -2.45
CCDC38-208ENST00000549876 RPL39LQ96EH5 51 aaKnown RBP-0.28□□□□□ -2.45
CCDC38-208ENST00000549876 TTTY10Q9BZA0 68 aa-0.28□□□□□ -2.45
CCDC38-208ENST00000549876 DEFB133Q30KQ1 61 aa-0.31□□□□□ -2.46
CCDC38-208ENST00000549876 A0A096LNI7 61 aa-0.32□□□□□ -2.46
CCDC38-208ENST00000549876 CD52P31358 61 aa-0.32□□□□□ -2.46
CCDC38-208ENST00000549876 LINC01556Q5JQF7 62 aa-0.32□□□□□ -2.46
CCDC38-208ENST00000549876 DEFB124Q8NES8 71 aa-0.32□□□□□ -2.46
CCDC38-208ENST00000549876 HTN1P15515 57 aa-0.33□□□□□ -2.46
CCDC38-208ENST00000549876 RHPN1-AS1Q9BWJ2 59 aa-0.33□□□□□ -2.46
CCDC38-208ENST00000549876 A0A096LPF7 62 aa-0.34□□□□□ -2.46
CCDC38-208ENST00000549876 H3BUX3 64 aa-0.36□□□□□ -2.47
CCDC38-208ENST00000549876 APELAP0DMC3 54 aa-0.36□□□□□ -2.47
CCDC38-208ENST00000549876 DEFB108BQ8NET1 73 aa-0.36□□□□□ -2.47
CCDC38-208ENST00000549876 DEFB108AA8MXU0 73 aa-0.37□□□□□ -2.47
CCDC38-208ENST00000549876 H3BSH0 61 aa-0.37□□□□□ -2.47
CCDC38-208ENST00000549876 STATHP02808 62 aa-0.37□□□□□ -2.47
CCDC38-208ENST00000549876 HTN3P15516 51 aa-0.37□□□□□ -2.47
CCDC38-208ENST00000549876 K7EIM0 57 aa-0.39□□□□□ -2.47
CCDC38-208ENST00000549876 TMEM167AQ8TBQ9 72 aa-0.39□□□□□ -2.47
CCDC38-208ENST00000549876 COX14Q96I36 57 aa-0.39□□□□□ -2.47
CCDC38-208ENST00000549876 Q9Y3F1 56 aa-0.39□□□□□ -2.47
CCDC38-208ENST00000549876 PRCDQ00LT1 54 aa-0.4□□□□□ -2.47
CCDC38-208ENST00000549876 RPL39P5Q59GN2 51 aa-0.41□□□□□ -2.48
CCDC38-208ENST00000549876 ARHGAP5-AS1Q96IT6 56 aa-0.41□□□□□ -2.48
Retrieved 78 of 20,778 RNA–protein pairs in 69.2 ms