RNA–Protein interactions for RNA: ENST00000541488.1

PRKDC-210, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-210ENST00000541488 C9orf62Q8N4C0 152 aa-0.31□□□□□ -2.46
PRKDC-210ENST00000541488 SPANXDQ9BXN6 97 aa-0.31□□□□□ -2.46
PRKDC-210ENST00000541488 LINC01558Q9Y6Z2 57 aa-0.31□□□□□ -2.46
PRKDC-210ENST00000541488 S100A8P05109 93 aa-0.32□□□□□ -2.46
PRKDC-210ENST00000541488 IGLC3P0DOY3 106 aa-0.32□□□□□ -2.46
PRKDC-210ENST00000541488 TMEM167BQ9NRX6 74 aa-0.32□□□□□ -2.46
PRKDC-210ENST00000541488 C20orf78Q9BR46 151 aa-0.33□□□□□ -2.46
PRKDC-210ENST00000541488 K7EMI3 77 aa-0.34□□□□□ -2.46
PRKDC-210ENST00000541488 WHAMMP3Q1A5X7 153 aa-0.34□□□□□ -2.46
PRKDC-210ENST00000541488 DEFB107AQ8IZN7 70 aa-0.34□□□□□ -2.46
PRKDC-210ENST00000541488 S100A16Q96FQ6 103 aaKnown RBP-0.34□□□□□ -2.46
PRKDC-210ENST00000541488 MYMXA0A1B0GTQ4 84 aa-0.35□□□□□ -2.47
PRKDC-210ENST00000541488 A0A1B0GUT8 65 aa-0.35□□□□□ -2.47
PRKDC-210ENST00000541488 GNG4P50150 75 aa-0.35□□□□□ -2.47
PRKDC-210ENST00000541488 MRPL54Q6P161 138 aaKnown RBP-0.35□□□□□ -2.47
PRKDC-210ENST00000541488 LINC00308Q8TCZ7 52 aa-0.35□□□□□ -2.47
PRKDC-210ENST00000541488 SMIM27A0A1W2PRY6 76 aa-0.36□□□□□ -2.47
PRKDC-210ENST00000541488 LINC00587B1AMM8 73 aa-0.36□□□□□ -2.47
PRKDC-210ENST00000541488 H7BZZ5 65 aa-0.36□□□□□ -2.47
PRKDC-210ENST00000541488 GNG11P61952 73 aa-0.36□□□□□ -2.47
PRKDC-210ENST00000541488 C12orf57Q99622 126 aa-0.36□□□□□ -2.47
PRKDC-210ENST00000541488 AKAIN1P0CW23 69 aa-0.37□□□□□ -2.47
PRKDC-210ENST00000541488 TCEAL7Q9BRU2 100 aa-0.37□□□□□ -2.47
PRKDC-210ENST00000541488 HIGD1BQ9P298 99 aa-0.37□□□□□ -2.47
PRKDC-210ENST00000541488 UQCR10Q9UDW1 63 aa-0.37□□□□□ -2.47
PRKDC-210ENST00000541488 SMIM31A0A1B0GVY4 71 aa-0.38□□□□□ -2.47
PRKDC-210ENST00000541488 NAP1L6A6NFF2 107 aa-0.38□□□□□ -2.47
PRKDC-210ENST00000541488 CHKB-CPT1BH3BT56 60 aa-0.39□□□□□ -2.47
PRKDC-210ENST00000541488 ATP5EP56381 51 aaPredicted RBP-0.39□□□□□ -2.47
PRKDC-210ENST00000541488 PMCHL1Q16048 86 aa-0.39□□□□□ -2.47
PRKDC-210ENST00000541488 GNG13Q9P2W3 67 aa-0.41□□□□□ -2.48
PRKDC-210ENST00000541488 FAUP35544 74 aaKnown RBP-0.42□□□□□ -2.48
PRKDC-210ENST00000541488 SERF2P84101 59 aa-0.42□□□□□ -2.48
PRKDC-210ENST00000541488 BVES-AS1Q5T3Y7 98 aa-0.42□□□□□ -2.48
PRKDC-210ENST00000541488 H0Y9P7 68 aa-0.43□□□□□ -2.48
PRKDC-210ENST00000541488 PLNP26678 52 aa-0.43□□□□□ -2.48
PRKDC-210ENST00000541488 NREPQ16612 68 aa-0.43□□□□□ -2.48
PRKDC-210ENST00000541488 TOMM5Q8N4H5 51 aa-0.43□□□□□ -2.48
PRKDC-210ENST00000541488 PMCHL2Q9BQD1 86 aa-0.43□□□□□ -2.48
PRKDC-210ENST00000541488 MANBALQ9NQG1 85 aa-0.43□□□□□ -2.48
PRKDC-210ENST00000541488 SMCO4Q9NRQ5 59 aa-0.43□□□□□ -2.48
PRKDC-210ENST00000541488 LINC01549A6NIU2 74 aa-0.44□□□□□ -2.48
PRKDC-210ENST00000541488 MPC2O95563 127 aa-0.44□□□□□ -2.48
PRKDC-210ENST00000541488 COX6CP09669 75 aa-0.44□□□□□ -2.48
PRKDC-210ENST00000541488 COX8AP10176 69 aa-0.45□□□□□ -2.48
PRKDC-210ENST00000541488 S100ZQ8WXG8 99 aa-0.45□□□□□ -2.48
PRKDC-210ENST00000541488 ADIRFQ15847 76 aa-0.46□□□□□ -2.48
PRKDC-210ENST00000541488 SVBPQ8N300 66 aa-0.46□□□□□ -2.48
PRKDC-210ENST00000541488 SERP2Q8N6R1 65 aa-0.46□□□□□ -2.48
PRKDC-210ENST00000541488 PRO1854Q9UHT4 67 aa-0.46□□□□□ -2.48
PRKDC-210ENST00000541488 SYS1-DBNDD2H3BUS1 97 aa-0.47□□□□□ -2.48
PRKDC-210ENST00000541488 DLEU1O43261 78 aa-0.47□□□□□ -2.48
PRKDC-210ENST00000541488 ATOX1O00244 68 aa-0.48□□□□□ -2.49
PRKDC-210ENST00000541488 KRTDAPP60985 99 aa-0.48□□□□□ -2.49
PRKDC-210ENST00000541488 TMEM218A2RU14 115 aa-0.49□□□□□ -2.49
PRKDC-210ENST00000541488 UMAD1C9J7I0 102 aa-0.49□□□□□ -2.49
PRKDC-210ENST00000541488 H0YGX0 51 aa-0.49□□□□□ -2.49
PRKDC-210ENST00000541488 LEPROTL1O95214 131 aa-0.49□□□□□ -2.49
PRKDC-210ENST00000541488 C18orf32Q8TCD1 76 aa-0.5□□□□□ -2.49
PRKDC-210ENST00000541488 A0A1B0GV90 55 aa-0.51□□□□□ -2.49
PRKDC-210ENST00000541488 HSD52Q0P140 79 aa-0.51□□□□□ -2.49
PRKDC-210ENST00000541488 UBL5Q9BZL1 73 aa-0.54□□□□□ -2.5
PRKDC-210ENST00000541488 A0A1B0GU69 56 aa-0.55□□□□□ -2.5
PRKDC-210ENST00000541488 S100A1P23297 94 aa-0.55□□□□□ -2.5
PRKDC-210ENST00000541488 GNGT1P63211 74 aa-0.55□□□□□ -2.5
PRKDC-210ENST00000541488 VAMP8Q9BV40 100 aa-0.55□□□□□ -2.5
PRKDC-210ENST00000541488 KANTRA0A1W2PQU2 76 aa-0.56□□□□□ -2.5
PRKDC-210ENST00000541488 GTF2H5Q6ZYL4 71 aa-0.57□□□□□ -2.5
PRKDC-210ENST00000541488 ATXN8Q156A1 80 aa-0.58□□□□□ -2.5
PRKDC-210ENST00000541488 Q9H521 79 aa-0.62□□□□□ -2.51
PRKDC-210ENST00000541488 PEA15Q15121 130 aa-0.63□□□□□ -2.51
PRKDC-210ENST00000541488 C14orf144Q96I85 54 aa-0.65□□□□□ -2.51
PRKDC-210ENST00000541488 ATP5EP2Q5VTU8 51 aa-0.69□□□□□ -2.52
PRKDC-210ENST00000541488 ETDBQ3ZM63 59 aa-0.72□□□□□ -2.52
PRKDC-210ENST00000541488 COL5A1-AS1Q5SY13 56 aa-0.76□□□□□ -2.53
PRKDC-210ENST00000541488 LINC00643Q86TS7 51 aa-0.78□□□□□ -2.53
PRKDC-210ENST00000541488 M0R143 59 aa-0.81□□□□□ -2.54
PRKDC-210ENST00000541488 PYY3Q5JQD4 70 aa-0.87□□□□□ -2.55
Retrieved 78 of 20,778 RNA–protein pairs in 9.7 ms