RNA–Protein interactions for RNA: ENST00000537585.1

SRGAP1-203, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 3

Gene SRGAP1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-203ENST00000537585 CMC2Q9NRP2 79 aa0.38□□□□□ -2.35
SRGAP1-203ENST00000537585 SYNE1Q8NF91 8797 aaKnown RBP0.37□□□□□ -2.35
SRGAP1-203ENST00000537585 H3BUA1 57 aa0.36□□□□□ -2.35
SRGAP1-203ENST00000537585 A0A1B0GUL6 1792 aa0.36□□□□□ -2.35
SRGAP1-203ENST00000537585 SMR3BP02814 79 aaPredicted RBP0.35□□□□□ -2.35
SRGAP1-203ENST00000537585 TOMM5Q8N4H5 51 aa0.32□□□□□ -2.36
SRGAP1-203ENST00000537585 NOP10Q9NPE3 64 aaKnown RBP0.31□□□□□ -2.36
SRGAP1-203ENST00000537585 ANKRD36CQ5JPF3 1778 aa0.3□□□□□ -2.36
SRGAP1-203ENST00000537585 SPRR2FQ96RM1 72 aa0.29□□□□□ -2.36
SRGAP1-203ENST00000537585 SMIM2Q9BVW6 85 aa0.29□□□□□ -2.36
SRGAP1-203ENST00000537585 GCC2Q8IWJ2 1684 aa0.29□□□□□ -2.36
SRGAP1-203ENST00000537585 IGLV5-48A0A075B6I7 105 aa0.28□□□□□ -2.36
SRGAP1-203ENST00000537585 DEFB110Q30KQ9 67 aa0.28□□□□□ -2.36
SRGAP1-203ENST00000537585 MT1HL1P0DM35 61 aa0.27□□□□□ -2.37
SRGAP1-203ENST00000537585 MT1HP80294 61 aa0.27□□□□□ -2.37
SRGAP1-203ENST00000537585 C9orf92A6NGG3 77 aa0.26□□□□□ -2.37
SRGAP1-203ENST00000537585 KRTAP20-2Q3LI61 65 aa0.25□□□□□ -2.37
SRGAP1-203ENST00000537585 SPRR2GQ9BYE4 73 aa0.25□□□□□ -2.37
SRGAP1-203ENST00000537585 M0QY20 66 aa0.24□□□□□ -2.37
SRGAP1-203ENST00000537585 DEFB104AQ8WTQ1 72 aa0.24□□□□□ -2.37
SRGAP1-203ENST00000537585 LINC01546A6NGU7 62 aa0.23□□□□□ -2.37
SRGAP1-203ENST00000537585 MMP24-AS1A0A0U1RRL7 71 aa0.22□□□□□ -2.37
SRGAP1-203ENST00000537585 KRTAP6-2Q3LI66 62 aa0.21□□□□□ -2.38
SRGAP1-203ENST00000537585 KRTAP19-2Q3LHN2 52 aa0.2□□□□□ -2.38
SRGAP1-203ENST00000537585 STATHP02808 62 aa0.19□□□□□ -2.38
SRGAP1-203ENST00000537585 NDUFA1O15239 70 aa0.18□□□□□ -2.38
SRGAP1-203ENST00000537585 TNP1P09430 55 aa0.18□□□□□ -2.38
SRGAP1-203ENST00000537585 DEFB131AP59861 70 aa0.18□□□□□ -2.38
SRGAP1-203ENST00000537585 SNRPGP62308 76 aaKnown RBP0.17□□□□□ -2.38
SRGAP1-203ENST00000537585 POLR2KP53803 58 aaKnown RBP0.16□□□□□ -2.38
SRGAP1-203ENST00000537585 TOMM7Q9P0U1 55 aa0.16□□□□□ -2.38
SRGAP1-203ENST00000537585 SPART-AS1P0CW21 52 aa0.15□□□□□ -2.39
SRGAP1-203ENST00000537585 ARHGAP5-AS1Q96IT6 56 aa0.15□□□□□ -2.39
SRGAP1-203ENST00000537585 A8MTW9 85 aa0.14□□□□□ -2.39
SRGAP1-203ENST00000537585 M0QZ58 72 aa0.14□□□□□ -2.39
SRGAP1-203ENST00000537585 MT2AP02795 61 aa0.14□□□□□ -2.39
SRGAP1-203ENST00000537585 MT1FP04733 61 aa0.14□□□□□ -2.39
SRGAP1-203ENST00000537585 RPL39P62891 51 aaKnown RBP0.14□□□□□ -2.39
SRGAP1-203ENST00000537585 PRCDQ00LT1 54 aa0.14□□□□□ -2.39
SRGAP1-203ENST00000537585 LINC01590Q5TEZ4 76 aa0.14□□□□□ -2.39
SRGAP1-203ENST00000537585 LEAP2Q969E1 77 aa0.14□□□□□ -2.39
SRGAP1-203ENST00000537585 RPL39LQ96EH5 51 aaKnown RBP0.14□□□□□ -2.39
SRGAP1-203ENST00000537585 RHPN1-AS1Q9BWJ2 59 aa0.14□□□□□ -2.39
SRGAP1-203ENST00000537585 TTTY10Q9BZA0 68 aa0.14□□□□□ -2.39
SRGAP1-203ENST00000537585 H3BSH0 61 aa0.13□□□□□ -2.39
SRGAP1-203ENST00000537585 CD52P31358 61 aa0.13□□□□□ -2.39
SRGAP1-203ENST00000537585 CLPSL2Q6UWE3 100 aa0.13□□□□□ -2.39
SRGAP1-203ENST00000537585 KRTAP8-1Q8IUC2 63 aa0.13□□□□□ -2.39
SRGAP1-203ENST00000537585 A0A096LNI7 61 aa0.12□□□□□ -2.39
SRGAP1-203ENST00000537585 DEFB108AA8MXU0 73 aa0.12□□□□□ -2.39
SRGAP1-203ENST00000537585 H3BUX3 64 aa0.12□□□□□ -2.39
SRGAP1-203ENST00000537585 K7EIM0 57 aa0.12□□□□□ -2.39
SRGAP1-203ENST00000537585 HTN1P15515 57 aa0.12□□□□□ -2.39
SRGAP1-203ENST00000537585 TMEM167AQ8TBQ9 72 aa0.12□□□□□ -2.39
SRGAP1-203ENST00000537585 Q9Y3F1 56 aa0.12□□□□□ -2.39
SRGAP1-203ENST00000537585 APELAP0DMC3 54 aa0.11□□□□□ -2.39
SRGAP1-203ENST00000537585 DEFB133Q30KQ1 61 aa0.11□□□□□ -2.39
SRGAP1-203ENST00000537585 RPL39P5Q59GN2 51 aa0.11□□□□□ -2.39
SRGAP1-203ENST00000537585 A0A096LPF7 62 aa0.1□□□□□ -2.39
SRGAP1-203ENST00000537585 DEFB1P60022 68 aa0.1□□□□□ -2.39
SRGAP1-203ENST00000537585 DEFB136Q30KP8 78 aa0.1□□□□□ -2.39
SRGAP1-203ENST00000537585 DEFB108BQ8NET1 73 aa0.1□□□□□ -2.39
SRGAP1-203ENST00000537585 HTN3P15516 51 aa0.09□□□□□ -2.4
SRGAP1-203ENST00000537585 RPS29P62273 56 aaKnown RBP0.09□□□□□ -2.4
SRGAP1-203ENST00000537585 LINC01556Q5JQF7 62 aa0.09□□□□□ -2.4
SRGAP1-203ENST00000537585 COX14Q96I36 57 aa0.09□□□□□ -2.4
SRGAP1-203ENST00000537585 DEFB4AO15263 64 aa0.08□□□□□ -2.4
SRGAP1-203ENST00000537585 MT1AP04731 61 aa0.07□□□□□ -2.4
SRGAP1-203ENST00000537585 MT1EP04732 61 aa0.05□□□□□ -2.4
SRGAP1-203ENST00000537585 MT1XP80297 61 aa0.05□□□□□ -2.4
SRGAP1-203ENST00000537585 KRTAP19-8Q3LI54 63 aa0.05□□□□□ -2.4
SRGAP1-203ENST00000537585 MT1LQ93083 61 aa0.05□□□□□ -2.4
SRGAP1-203ENST00000537585 MT1BP07438 61 aa0.04□□□□□ -2.4
SRGAP1-203ENST00000537585 MT1GP13640 62 aa0.04□□□□□ -2.4
SRGAP1-203ENST00000537585 KRTAP19-5Q3LI72 72 aa0.04□□□□□ -2.4
SRGAP1-203ENST00000537585 KRTAP19-7Q3SYF9 63 aa0.04□□□□□ -2.4
SRGAP1-203ENST00000537585 KRTAP6-1Q3LI64 71 aa0.03□□□□□ -2.4
SRGAP1-203ENST00000537585 MT1MQ8N339 61 aa0.03□□□□□ -2.4
Retrieved 78 of 20,778 RNA–protein pairs in 57.7 ms