RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 TNP1P09430 55 aa0.11□□□□□ -2.39
C11orf88-204ENST00000529661 DNAH1Q9P2D7 4330 aa0.1□□□□□ -2.39
C11orf88-204ENST00000529661 DNAH7Q8WXX0 4024 aa0.1□□□□□ -2.39
C11orf88-204ENST00000529661 M0QZ58 72 aa0.1□□□□□ -2.39
C11orf88-204ENST00000529661 DEFB110Q30KQ9 67 aa0.09□□□□□ -2.4
C11orf88-204ENST00000529661 CMYA5Q8N3K9 4069 aa0.08□□□□□ -2.4
C11orf88-204ENST00000529661 KRTAP20-2Q3LI61 65 aa0.08□□□□□ -2.4
C11orf88-204ENST00000529661 TRRAPQ9Y4A5 3859 aa0.08□□□□□ -2.4
C11orf88-204ENST00000529661 DNAH2Q9P225 4427 aa0.07□□□□□ -2.4
C11orf88-204ENST00000529661 TOP2AP11388 1531 aaKnown RBP0.07□□□□□ -2.4
C11orf88-204ENST00000529661 DNAH11Q96DT5 4516 aa0.06□□□□□ -2.4
C11orf88-204ENST00000529661 DNAH5Q8TE73 4624 aa0.06□□□□□ -2.4
C11orf88-204ENST00000529661 DYNC2H1Q8NCM8 4307 aaKnown RBP0.06□□□□□ -2.4
C11orf88-204ENST00000529661 FAT1Q14517 4588 aa0.06□□□□□ -2.4
C11orf88-204ENST00000529661 APOBP04114 4563 aaKnown RBP0.05□□□□□ -2.4
C11orf88-204ENST00000529661 DNAH6Q9C0G6 4158 aa0.04□□□□□ -2.4
C11orf88-204ENST00000529661 PLECQ15149 4684 aaKnown RBP0.03□□□□□ -2.41
C11orf88-204ENST00000529661 DNAH10Q8IVF4 4471 aa0.01□□□□□ -2.41
C11orf88-204ENST00000529661 DEFB124Q8NES8 71 aa0□□□□□ -2.41
C11orf88-204ENST00000529661 MUC17Q685J3 4493 aa-0.01□□□□□ -2.41
C11orf88-204ENST00000529661 MT1HP80294 61 aa-0.01□□□□□ -2.41
C11orf88-204ENST00000529661 KRTAP8-1Q8IUC2 63 aa-0.02□□□□□ -2.41
C11orf88-204ENST00000529661 VPS13DQ5THJ4 4388 aa-0.03□□□□□ -2.41
C11orf88-204ENST00000529661 KRTAP6-1Q3LI64 71 aa-0.03□□□□□ -2.41
C11orf88-204ENST00000529661 CLPSL2Q6UWE3 100 aa-0.03□□□□□ -2.41
C11orf88-204ENST00000529661 DEFB104AQ8WTQ1 72 aa-0.03□□□□□ -2.41
C11orf88-204ENST00000529661 POLR2KP53803 58 aaKnown RBP-0.04□□□□□ -2.42
C11orf88-204ENST00000529661 KRTAP19-5Q3LI72 72 aa-0.05□□□□□ -2.42
C11orf88-204ENST00000529661 DNAH8Q96JB1 4490 aa-0.06□□□□□ -2.42
C11orf88-204ENST00000529661 DNAH17Q9UFH2 4485 aa-0.07□□□□□ -2.42
C11orf88-204ENST00000529661 KRTAP19-7Q3SYF9 63 aa-0.07□□□□□ -2.42
C11orf88-204ENST00000529661 MT1HL1P0DM35 61 aa-0.08□□□□□ -2.42
C11orf88-204ENST00000529661 MROH2BQ7Z745 1585 aa-0.09□□□□□ -2.42
C11orf88-204ENST00000529661 MT1BP07438 61 aa-0.11□□□□□ -2.43
C11orf88-204ENST00000529661 KRTAP19-8Q3LI54 63 aa-0.11□□□□□ -2.43
C11orf88-204ENST00000529661 DUOX1Q9NRD9 1551 aa-0.11□□□□□ -2.43
C11orf88-204ENST00000529661 MT2AP02795 61 aa-0.13□□□□□ -2.43
C11orf88-204ENST00000529661 SPART-AS1P0CW21 52 aa-0.13□□□□□ -2.43
C11orf88-204ENST00000529661 GCC2Q8IWJ2 1684 aa-0.14□□□□□ -2.43
C11orf88-204ENST00000529661 MT1FP04733 61 aa-0.14□□□□□ -2.43
C11orf88-204ENST00000529661 KRTAP19-2Q3LHN2 52 aa-0.14□□□□□ -2.43
C11orf88-204ENST00000529661 DEFB1P60022 68 aa-0.17□□□□□ -2.44
C11orf88-204ENST00000529661 RPL39P62891 51 aaKnown RBP-0.21□□□□□ -2.44
C11orf88-204ENST00000529661 MT1GP13640 62 aa-0.22□□□□□ -2.44
C11orf88-204ENST00000529661 SNRPGP62308 76 aaKnown RBP-0.22□□□□□ -2.44
C11orf88-204ENST00000529661 STATHP02808 62 aa-0.24□□□□□ -2.45
C11orf88-204ENST00000529661 MT1MQ8N339 61 aa-0.24□□□□□ -2.45
C11orf88-204ENST00000529661 TOMM7Q9P0U1 55 aa-0.26□□□□□ -2.45
C11orf88-204ENST00000529661 MT1EP04732 61 aa-0.29□□□□□ -2.46
C11orf88-204ENST00000529661 LEAP2Q969E1 77 aa-0.29□□□□□ -2.46
C11orf88-204ENST00000529661 RPL39LQ96EH5 51 aaKnown RBP-0.29□□□□□ -2.46
C11orf88-204ENST00000529661 MT1XP80297 61 aa-0.31□□□□□ -2.46
C11orf88-204ENST00000529661 RPS29P62273 56 aaKnown RBP-0.33□□□□□ -2.46
C11orf88-204ENST00000529661 TTTY10Q9BZA0 68 aa-0.33□□□□□ -2.46
C11orf88-204ENST00000529661 LINC01590Q5TEZ4 76 aa-0.34□□□□□ -2.46
C11orf88-204ENST00000529661 MT1LQ93083 61 aa-0.35□□□□□ -2.47
C11orf88-204ENST00000529661 DEFB4AO15263 64 aa-0.36□□□□□ -2.47
C11orf88-204ENST00000529661 DEFB136Q30KP8 78 aa-0.39□□□□□ -2.47
C11orf88-204ENST00000529661 H3BSH0 61 aa-0.41□□□□□ -2.48
C11orf88-204ENST00000529661 DEFB108AA8MXU0 73 aa-0.42□□□□□ -2.48
C11orf88-204ENST00000529661 DEFB133Q30KQ1 61 aa-0.49□□□□□ -2.49
C11orf88-204ENST00000529661 RHPN1-AS1Q9BWJ2 59 aa-0.5□□□□□ -2.49
C11orf88-204ENST00000529661 HTN1P15515 57 aa-0.51□□□□□ -2.49
C11orf88-204ENST00000529661 CD52P31358 61 aa-0.51□□□□□ -2.49
C11orf88-204ENST00000529661 DEFB108BQ8NET1 73 aa-0.51□□□□□ -2.49
C11orf88-204ENST00000529661 HTN3P15516 51 aa-0.52□□□□□ -2.49
C11orf88-204ENST00000529661 Q9Y3F1 56 aa-0.52□□□□□ -2.49
C11orf88-204ENST00000529661 A0A096LNI7 61 aa-0.53□□□□□ -2.49
C11orf88-204ENST00000529661 ARHGAP5-AS1Q96IT6 56 aa-0.53□□□□□ -2.49
C11orf88-204ENST00000529661 H3BUX3 64 aa-0.56□□□□□ -2.5
C11orf88-204ENST00000529661 LINC01556Q5JQF7 62 aa-0.58□□□□□ -2.5
C11orf88-204ENST00000529661 K7EIM0 57 aa-0.6□□□□□ -2.51
C11orf88-204ENST00000529661 COX14Q96I36 57 aa-0.6□□□□□ -2.51
C11orf88-204ENST00000529661 PRCDQ00LT1 54 aa-0.61□□□□□ -2.51
C11orf88-204ENST00000529661 APELAP0DMC3 54 aa-0.62□□□□□ -2.51
C11orf88-204ENST00000529661 A0A096LPF7 62 aa-0.66□□□□□ -2.52
C11orf88-204ENST00000529661 TMEM167AQ8TBQ9 72 aa-0.74□□□□□ -2.53
C11orf88-204ENST00000529661 RPL39P5Q59GN2 51 aa-0.83□□□□□ -2.54
Retrieved 78 of 20,778 RNA–protein pairs in 53.6 ms