RNA–Protein interactions for RNA: ENST00000527586.1

VPS26B-204, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-204ENST00000527586 A0A1B0GU33 70 aa2.55□□□□□ -2
VPS26B-204ENST00000527586 NDUFAF8A1L188 74 aa2.54□□□□□ -2
VPS26B-204ENST00000527586 NDUFB1O75438 58 aa2.54□□□□□ -2
VPS26B-204ENST00000527586 MT1GP13640 62 aa2.54□□□□□ -2
VPS26B-204ENST00000527586 KRTAP19-7Q3SYF9 63 aa2.54□□□□□ -2
VPS26B-204ENST00000527586 Q5W150 140 aa2.54□□□□□ -2
VPS26B-204ENST00000527586 IGKV4-1P06312 121 aa2.53□□□□□ -2
VPS26B-204ENST00000527586 PDE6GP18545 87 aa2.53□□□□□ -2
VPS26B-204ENST00000527586 NREPQ16612 68 aa2.53□□□□□ -2
VPS26B-204ENST00000527586 KRTAP25-1Q3LHN0 102 aa2.53□□□□□ -2
VPS26B-204ENST00000527586 LINC01558Q9Y6Z2 57 aa2.53□□□□□ -2
VPS26B-204ENST00000527586 LINC00575Q6W349 94 aa2.52□□□□□ -2.01
VPS26B-204ENST00000527586 PP632Q6XCG6 107 aa2.52□□□□□ -2.01
VPS26B-204ENST00000527586 Q6ZQY7 126 aa2.52□□□□□ -2.01
VPS26B-204ENST00000527586 DEFB116Q30KQ4 102 aa2.51□□□□□ -2.01
VPS26B-204ENST00000527586 KRTAP5-2Q701N4 177 aa2.51□□□□□ -2.01
VPS26B-204ENST00000527586 UBL5Q9BZL1 73 aa2.51□□□□□ -2.01
VPS26B-204ENST00000527586 SYNE1Q8NF91 8797 aaKnown RBP2.51□□□□□ -2.01
VPS26B-204ENST00000527586 KRTAP12-4P60329 112 aa2.5□□□□□ -2.01
VPS26B-204ENST00000527586 MT1MQ8N339 61 aa2.5□□□□□ -2.01
VPS26B-204ENST00000527586 KRTAP4-3Q9BYR4 195 aa2.5□□□□□ -2.01
VPS26B-204ENST00000527586 LINC00208Q96KT6 92 aa2.49□□□□□ -2.01
VPS26B-204ENST00000527586 S4R3F8 94 aa2.49□□□□□ -2.01
VPS26B-204ENST00000527586 H0YGX0 51 aa2.47□□□□□ -2.01
VPS26B-204ENST00000527586 UQCR11O14957 56 aa2.47□□□□□ -2.01
VPS26B-204ENST00000527586 H0Y9P7 68 aa2.46□□□□□ -2.02
VPS26B-204ENST00000527586 JMJD7-PLA2G4BH0Y9G9 81 aa2.45□□□□□ -2.02
VPS26B-204ENST00000527586 KRTAP15-1Q3LI76 137 aa2.45□□□□□ -2.02
VPS26B-204ENST00000527586 SPATA8Q6RVD6 105 aa2.44□□□□□ -2.02
VPS26B-204ENST00000527586 OBSCNQ5VST9 7968 aa2.43□□□□□ -2.02
VPS26B-204ENST00000527586 IGKV2D-30A0A075B6S6 120 aa2.38□□□□□ -2.03
VPS26B-204ENST00000527586 IGKV2-30P06310 120 aa2.38□□□□□ -2.03
VPS26B-204ENST00000527586 SPINT4Q6UDR6 99 aa2.38□□□□□ -2.03
VPS26B-204ENST00000527586 R4GN34 69 aa2.38□□□□□ -2.03
VPS26B-204ENST00000527586 LOC110117498A0A087WWA1 95 aa2.37□□□□□ -2.03
VPS26B-204ENST00000527586 LINC00472Q9H8W2 130 aa2.37□□□□□ -2.03
VPS26B-204ENST00000527586 COA5Q86WW8 74 aa2.36□□□□□ -2.03
VPS26B-204ENST00000527586 KRTAP5-5Q701N2 237 aaPredicted RBP2.35□□□□□ -2.03
VPS26B-204ENST00000527586 K7EQZ3 153 aa2.34□□□□□ -2.03
VPS26B-204ENST00000527586 MT1LQ93083 61 aa2.32□□□□□ -2.04
VPS26B-204ENST00000527586 A0A1B0GU69 56 aa2.3□□□□□ -2.04
VPS26B-204ENST00000527586 KRTAP19-5Q3LI72 72 aa2.29□□□□□ -2.04
VPS26B-204ENST00000527586 ACYP2P14621 99 aa2.27□□□□□ -2.05
VPS26B-204ENST00000527586 MMP24-AS1A0A0U1RRL7 71 aa2.26□□□□□ -2.05
VPS26B-204ENST00000527586 INE1O15225 51 aa2.25□□□□□ -2.05
VPS26B-204ENST00000527586 KRTAP5-1Q6L8H4 278 aa2.25□□□□□ -2.05
VPS26B-204ENST00000527586 Q8N9L7 120 aa2.25□□□□□ -2.05
VPS26B-204ENST00000527586 MRPL34Q9BQ48 92 aaKnown RBP2.24□□□□□ -2.05
VPS26B-204ENST00000527586 M0QZ58 72 aa2.2□□□□□ -2.06
VPS26B-204ENST00000527586 TP53AIP1Q9HCN2 124 aa2.15□□□□□ -2.07
VPS26B-204ENST00000527586 A0A0D9SG42 100 aa2.08□□□□□ -2.08
VPS26B-204ENST00000527586 KRTAP6-2Q3LI66 62 aa2.08□□□□□ -2.08
VPS26B-204ENST00000527586 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.08□□□□□ -2.08
VPS26B-204ENST00000527586 C10orf95Q9H7T3 257 aa2.08□□□□□ -2.08
VPS26B-204ENST00000527586 PHGR1C9JFL3 82 aa2.05□□□□□ -2.08
VPS26B-204ENST00000527586 LCE3AQ5TA76 89 aa2.04□□□□□ -2.08
VPS26B-204ENST00000527586 KRTAP6-1Q3LI64 71 aa2.01□□□□□ -2.09
VPS26B-204ENST00000527586 MT3P25713 68 aa1.97□□□□□ -2.09
VPS26B-204ENST00000527586 MT1AP04731 61 aa1.95□□□□□ -2.1
VPS26B-204ENST00000527586 KRTAP5-11Q6L8G4 156 aa1.95□□□□□ -2.1
VPS26B-204ENST00000527586 LCE1EQ5T753 118 aa1.93□□□□□ -2.1
VPS26B-204ENST00000527586 KRTAP13-4Q3LI77 160 aa1.89□□□□□ -2.11
VPS26B-204ENST00000527586 LCE1BQ5T7P3 118 aa1.86□□□□□ -2.11
VPS26B-204ENST00000527586 KRTAP12-3P60328 96 aa1.76□□□□□ -2.13
VPS26B-204ENST00000527586 LCE1FQ5T754 118 aa1.76□□□□□ -2.13
VPS26B-204ENST00000527586 KRTAP12-1P59990 96 aa1.73□□□□□ -2.13
VPS26B-204ENST00000527586 LCE1CQ5T751 118 aa1.72□□□□□ -2.13
VPS26B-204ENST00000527586 KRTAP4-4Q9BYR3 166 aa1.71□□□□□ -2.14
VPS26B-204ENST00000527586 KRTAP9-6A8MVA2 160 aa1.65□□□□□ -2.15
VPS26B-204ENST00000527586 TNP1P09430 55 aa1.64□□□□□ -2.15
VPS26B-204ENST00000527586 LCE3CQ5T5A8 94 aa1.59□□□□□ -2.15
VPS26B-204ENST00000527586 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
VPS26B-204ENST00000527586 MUC19Q7Z5P9 8384 aa1.52□□□□□ -2.17
VPS26B-204ENST00000527586 LCE3EQ5T5B0 92 aa1.46□□□□□ -2.18
VPS26B-204ENST00000527586 LCE3DQ9BYE3 92 aa1.37□□□□□ -2.19
VPS26B-204ENST00000527586 KRTAP21-2Q3LI59 83 aa1.33□□□□□ -2.2
VPS26B-204ENST00000527586 PRM1P04553 51 aa1.13□□□□□ -2.23
VPS26B-204ENST00000527586 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 69.1 ms