RNA–Protein interactions for RNA: ENST00000526874.5

CTR9-203, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene CTR9, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-203ENST00000526874 LRP1BQ9NZR2 4599 aa1.16□□□□□ -2.22
CTR9-203ENST00000526874 DNAH2Q9P225 4427 aa1.15□□□□□ -2.23
CTR9-203ENST00000526874 DNAH5Q8TE73 4624 aa1.15□□□□□ -2.23
CTR9-203ENST00000526874 DSTQ03001 7570 aaKnown RBP1.15□□□□□ -2.23
CTR9-203ENST00000526874 USH2AO75445 5202 aa1.14□□□□□ -2.23
CTR9-203ENST00000526874 SPINK6Q6UWN8 80 aa1.14□□□□□ -2.23
CTR9-203ENST00000526874 NOP10Q9NPE3 64 aaKnown RBP1.14□□□□□ -2.23
CTR9-203ENST00000526874 DNAH17Q9UFH2 4485 aa1.14□□□□□ -2.23
CTR9-203ENST00000526874 MUC12Q9UKN1 5478 aa1.14□□□□□ -2.23
CTR9-203ENST00000526874 A0A096LPF7 62 aa1.13□□□□□ -2.23
CTR9-203ENST00000526874 LRP1Q07954 4544 aaKnown RBP1.12□□□□□ -2.23
CTR9-203ENST00000526874 A8MTW9 85 aa1.12□□□□□ -2.23
CTR9-203ENST00000526874 AHNAKQ09666 5890 aaKnown RBP1.12□□□□□ -2.23
CTR9-203ENST00000526874 MDN1Q9NU22 5596 aa1.11□□□□□ -2.23
CTR9-203ENST00000526874 H3BNG1 76 aa1.1□□□□□ -2.23
CTR9-203ENST00000526874 SMR3BP02814 79 aaPredicted RBP1.1□□□□□ -2.23
CTR9-203ENST00000526874 WFDC10BQ8IUB3 73 aa1.1□□□□□ -2.23
CTR9-203ENST00000526874 S4R3F8 94 aa1.1□□□□□ -2.23
CTR9-203ENST00000526874 SMIM2Q9BVW6 85 aa1.09□□□□□ -2.23
CTR9-203ENST00000526874 LINC01556Q5JQF7 62 aa1.08□□□□□ -2.24
CTR9-203ENST00000526874 DEFB104AQ8WTQ1 72 aa1.08□□□□□ -2.24
CTR9-203ENST00000526874 TNXBP22105 4242 aa1.07□□□□□ -2.24
CTR9-203ENST00000526874 M0QY20 66 aa1.07□□□□□ -2.24
CTR9-203ENST00000526874 CLPSL2Q6UWE3 100 aa1.07□□□□□ -2.24
CTR9-203ENST00000526874 RPL39LQ96EH5 51 aaKnown RBP1.06□□□□□ -2.24
CTR9-203ENST00000526874 LPAP08519 4548 aa1.05□□□□□ -2.24
CTR9-203ENST00000526874 PRLHP81277 87 aa1.04□□□□□ -2.24
CTR9-203ENST00000526874 SPINK1P00995 79 aa1.03□□□□□ -2.24
CTR9-203ENST00000526874 POLR2KP53803 58 aaKnown RBP1.03□□□□□ -2.24
CTR9-203ENST00000526874 A0A096LNI7 61 aa1.02□□□□□ -2.25
CTR9-203ENST00000526874 RPL39P62891 51 aaKnown RBP1.02□□□□□ -2.25
CTR9-203ENST00000526874 DNAH8Q96JB1 4490 aa1.02□□□□□ -2.25
CTR9-203ENST00000526874 MUC5BQ9HC84 5762 aaPredicted RBP1.02□□□□□ -2.25
CTR9-203ENST00000526874 NDUFA1O15239 70 aa1.01□□□□□ -2.25
CTR9-203ENST00000526874 TOMM7Q9P0U1 55 aa1.01□□□□□ -2.25
CTR9-203ENST00000526874 MUC17Q685J3 4493 aa1.01□□□□□ -2.25
CTR9-203ENST00000526874 MT1HL1P0DM35 61 aa0.99□□□□□ -2.25
CTR9-203ENST00000526874 M0R2T5 61 aa0.97□□□□□ -2.25
CTR9-203ENST00000526874 PRM1P04553 51 aa0.96□□□□□ -2.26
CTR9-203ENST00000526874 SYNE1Q8NF91 8797 aaKnown RBP0.95□□□□□ -2.26
CTR9-203ENST00000526874 MUC5ACP98088 5654 aa0.94□□□□□ -2.26
CTR9-203ENST00000526874 KRTAP5-10Q6L8G5 202 aa0.93□□□□□ -2.26
CTR9-203ENST00000526874 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
CTR9-203ENST00000526874 MMP24-AS1A0A0U1RRL7 71 aa0.91□□□□□ -2.26
CTR9-203ENST00000526874 IGLV5-48A0A075B6I7 105 aa0.9□□□□□ -2.27
CTR9-203ENST00000526874 C9orf92A6NGG3 77 aa0.9□□□□□ -2.27
CTR9-203ENST00000526874 RPS29P62273 56 aaKnown RBP0.89□□□□□ -2.27
CTR9-203ENST00000526874 SPRR2EP22531 72 aa0.87□□□□□ -2.27
CTR9-203ENST00000526874 SPRR2BP35325 72 aa0.87□□□□□ -2.27
CTR9-203ENST00000526874 SPRR2AP35326 72 aa0.87□□□□□ -2.27
CTR9-203ENST00000526874 KRTAP19-6Q3LI70 58 aa0.86□□□□□ -2.27
CTR9-203ENST00000526874 MT1HP80294 61 aa0.85□□□□□ -2.27
CTR9-203ENST00000526874 SPRR2DP22532 72 aa0.84□□□□□ -2.27
CTR9-203ENST00000526874 KRTAP19-2Q3LHN2 52 aa0.84□□□□□ -2.27
CTR9-203ENST00000526874 FLGP20930 4061 aaPredicted RBP0.84□□□□□ -2.28
CTR9-203ENST00000526874 KRTAP21-1Q3LI58 79 aa0.83□□□□□ -2.28
CTR9-203ENST00000526874 MT4P47944 62 aa0.82□□□□□ -2.28
CTR9-203ENST00000526874 MT2AP02795 61 aa0.79□□□□□ -2.28
CTR9-203ENST00000526874 SPRR2FQ96RM1 72 aa0.79□□□□□ -2.28
CTR9-203ENST00000526874 MT1FP04733 61 aa0.78□□□□□ -2.28
CTR9-203ENST00000526874 SPRR2GQ9BYE4 73 aa0.72□□□□□ -2.29
CTR9-203ENST00000526874 MT1BP07438 61 aa0.71□□□□□ -2.3
CTR9-203ENST00000526874 KRTAP19-8Q3LI54 63 aa0.7□□□□□ -2.3
CTR9-203ENST00000526874 M0QZ58 72 aa0.69□□□□□ -2.3
CTR9-203ENST00000526874 MT1XP80297 61 aa0.67□□□□□ -2.3
CTR9-203ENST00000526874 KRTAP8-1Q8IUC2 63 aa0.67□□□□□ -2.3
CTR9-203ENST00000526874 TNP1P09430 55 aa0.61□□□□□ -2.31
CTR9-203ENST00000526874 PHGR1C9JFL3 82 aa0.6□□□□□ -2.31
CTR9-203ENST00000526874 MT1EP04732 61 aa0.59□□□□□ -2.31
CTR9-203ENST00000526874 KRTAP19-5Q3LI72 72 aa0.59□□□□□ -2.31
CTR9-203ENST00000526874 KRTAP19-7Q3SYF9 63 aa0.59□□□□□ -2.31
CTR9-203ENST00000526874 MT1GP13640 62 aa0.57□□□□□ -2.32
CTR9-203ENST00000526874 KRTAP6-2Q3LI66 62 aa0.57□□□□□ -2.32
CTR9-203ENST00000526874 MT1LQ93083 61 aa0.57□□□□□ -2.32
CTR9-203ENST00000526874 KRTAP20-2Q3LI61 65 aa0.56□□□□□ -2.32
CTR9-203ENST00000526874 MT1MQ8N339 61 aa0.56□□□□□ -2.32
CTR9-203ENST00000526874 KRTAP6-1Q3LI64 71 aa0.48□□□□□ -2.33
CTR9-203ENST00000526874 MT1AP04731 61 aa0.47□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 133.7 ms