RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 CPSF4LA6NMK7 179 aaKnown RBP0.95□□□□□ -2.26
CSDE1-209ENST00000525132 I3L3M4 83 aa0.95□□□□□ -2.26
CSDE1-209ENST00000525132 NREPQ16612 68 aa0.95□□□□□ -2.26
CSDE1-209ENST00000525132 Q6ZRX8 168 aa0.95□□□□□ -2.26
CSDE1-209ENST00000525132 PRR15LQ9BU68 103 aa0.95□□□□□ -2.26
CSDE1-209ENST00000525132 TRAV21A0A0B4J279 112 aa0.94□□□□□ -2.26
CSDE1-209ENST00000525132 M0R3E3 92 aa0.94□□□□□ -2.26
CSDE1-209ENST00000525132 NDUFA1O15239 70 aa0.94□□□□□ -2.26
CSDE1-209ENST00000525132 MGPP08493 103 aa0.94□□□□□ -2.26
CSDE1-209ENST00000525132 SPATA8Q6RVD6 105 aa0.94□□□□□ -2.26
CSDE1-209ENST00000525132 TMEM167AQ8TBQ9 72 aa0.94□□□□□ -2.26
CSDE1-209ENST00000525132 SPRR4Q96PI1 79 aa0.94□□□□□ -2.26
CSDE1-209ENST00000525132 A0A087WVE0 104 aa0.93□□□□□ -2.26
CSDE1-209ENST00000525132 MT1XP80297 61 aa0.93□□□□□ -2.26
CSDE1-209ENST00000525132 ETDCA0A1B0GVM5 59 aa0.92□□□□□ -2.26
CSDE1-209ENST00000525132 H0Y9P7 68 aa0.92□□□□□ -2.26
CSDE1-209ENST00000525132 MT1GP13640 62 aa0.92□□□□□ -2.26
CSDE1-209ENST00000525132 POLR2KP53803 58 aaKnown RBP0.92□□□□□ -2.26
CSDE1-209ENST00000525132 PRCDQ00LT1 54 aa0.92□□□□□ -2.26
CSDE1-209ENST00000525132 KLK9Q2XQG4 91 aa0.92□□□□□ -2.26
CSDE1-209ENST00000525132 ENHOQ6UWT2 76 aa0.92□□□□□ -2.26
CSDE1-209ENST00000525132 LINC00308Q8TCZ7 52 aa0.92□□□□□ -2.26
CSDE1-209ENST00000525132 H0YAA0 97 aa0.91□□□□□ -2.26
CSDE1-209ENST00000525132 SPINK4O60575 86 aa0.91□□□□□ -2.26
CSDE1-209ENST00000525132 IAPPP10997 89 aa0.91□□□□□ -2.26
CSDE1-209ENST00000525132 COX7BP24311 80 aa0.91□□□□□ -2.26
CSDE1-209ENST00000525132 MT1MQ8N339 61 aa0.91□□□□□ -2.26
CSDE1-209ENST00000525132 LINC00472Q9H8W2 130 aa0.91□□□□□ -2.26
CSDE1-209ENST00000525132 CRIP1P50238 77 aa0.9□□□□□ -2.27
CSDE1-209ENST00000525132 TP53AIP1Q9HCN2 124 aa0.9□□□□□ -2.27
CSDE1-209ENST00000525132 IGLV5-48A0A075B6I7 105 aa0.89□□□□□ -2.27
CSDE1-209ENST00000525132 SPRR2GQ9BYE4 73 aa0.89□□□□□ -2.27
CSDE1-209ENST00000525132 A0A0D9SG42 100 aa0.87□□□□□ -2.27
CSDE1-209ENST00000525132 MT1EP04732 61 aa0.87□□□□□ -2.27
CSDE1-209ENST00000525132 PIGYQ3MUY2 71 aa0.87□□□□□ -2.27
CSDE1-209ENST00000525132 Q8IZM0 81 aa0.87□□□□□ -2.27
CSDE1-209ENST00000525132 LINC00959A0A1B0GUT2 108 aa0.86□□□□□ -2.27
CSDE1-209ENST00000525132 K7EIM0 57 aa0.86□□□□□ -2.27
CSDE1-209ENST00000525132 M0QY20 66 aa0.86□□□□□ -2.27
CSDE1-209ENST00000525132 RPS27P42677 84 aaKnown RBP0.86□□□□□ -2.27
CSDE1-209ENST00000525132 SPINK7P58062 85 aa0.86□□□□□ -2.27
CSDE1-209ENST00000525132 LINC00158P58513 81 aa0.86□□□□□ -2.27
CSDE1-209ENST00000525132 RPL39P5Q59GN2 51 aa0.86□□□□□ -2.27
CSDE1-209ENST00000525132 I3L2K1 104 aa0.85□□□□□ -2.27
CSDE1-209ENST00000525132 SPINK1P00995 79 aa0.85□□□□□ -2.27
CSDE1-209ENST00000525132 A8MTW9 85 aa0.84□□□□□ -2.27
CSDE1-209ENST00000525132 WT1-ASQ06250 92 aa0.84□□□□□ -2.27
CSDE1-209ENST00000525132 KRTAP19-7Q3SYF9 63 aa0.84□□□□□ -2.27
CSDE1-209ENST00000525132 SSBP3-AS1Q7Z2R9 100 aa0.84□□□□□ -2.27
CSDE1-209ENST00000525132 C10orf95Q9H7T3 257 aa0.84□□□□□ -2.27
CSDE1-209ENST00000525132 CDKN2A-AS1Q9UH64 79 aa0.84□□□□□ -2.27
CSDE1-209ENST00000525132 A0A1B0GU69 56 aa0.83□□□□□ -2.28
CSDE1-209ENST00000525132 K7EQZ3 153 aa0.82□□□□□ -2.28
CSDE1-209ENST00000525132 RPL39P62891 51 aaKnown RBP0.82□□□□□ -2.28
CSDE1-209ENST00000525132 RPL39LQ96EH5 51 aaKnown RBP0.82□□□□□ -2.28
CSDE1-209ENST00000525132 RPS29P62273 56 aaKnown RBP0.81□□□□□ -2.28
CSDE1-209ENST00000525132 KRTAP6-2Q3LI66 62 aa0.81□□□□□ -2.28
CSDE1-209ENST00000525132 SPRR1AP35321 89 aa0.8□□□□□ -2.28
CSDE1-209ENST00000525132 SPRR1BP22528 89 aa0.79□□□□□ -2.28
CSDE1-209ENST00000525132 MRPL34Q9BQ48 92 aaKnown RBP0.79□□□□□ -2.28
CSDE1-209ENST00000525132 C6orf48Q9UBA6 75 aa0.79□□□□□ -2.28
CSDE1-209ENST00000525132 CLPSL2Q6UWE3 100 aa0.78□□□□□ -2.28
CSDE1-209ENST00000525132 MMP24-AS1A0A0U1RRL7 71 aa0.77□□□□□ -2.29
CSDE1-209ENST00000525132 CRIPTQ9P021 101 aa0.76□□□□□ -2.29
CSDE1-209ENST00000525132 H1FX-AS1Q4G0G2 97 aa0.73□□□□□ -2.29
CSDE1-209ENST00000525132 WFDC13Q8IUB5 93 aa0.73□□□□□ -2.29
CSDE1-209ENST00000525132 TOMM7Q9P0U1 55 aa0.71□□□□□ -2.3
CSDE1-209ENST00000525132 M0QZ58 72 aa0.69□□□□□ -2.3
CSDE1-209ENST00000525132 MT1LQ93083 61 aa0.67□□□□□ -2.3
CSDE1-209ENST00000525132 S4R3F8 94 aa0.67□□□□□ -2.3
CSDE1-209ENST00000525132 PRLHP81277 87 aa0.65□□□□□ -2.31
CSDE1-209ENST00000525132 DEFB105AQ8NG35 78 aa0.65□□□□□ -2.31
CSDE1-209ENST00000525132 KRTAP6-1Q3LI64 71 aa0.64□□□□□ -2.31
CSDE1-209ENST00000525132 TNP1P09430 55 aa0.59□□□□□ -2.31
CSDE1-209ENST00000525132 KRTAP19-5Q3LI72 72 aa0.57□□□□□ -2.32
CSDE1-209ENST00000525132 MUC16Q8WXI7 14507 aa0.57□□□□□ -2.32
CSDE1-209ENST00000525132 MT1AP04731 61 aa0.53□□□□□ -2.32
CSDE1-209ENST00000525132 PRM1P04553 51 aa0.37□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 6.4 ms