RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 hDV103S1A0JD37 113 aa2.26□□□□□ -2.05
NEDD8-203ENST00000524927 CCKP06307 115 aa2.26□□□□□ -2.05
NEDD8-203ENST00000524927 FXYD2P54710 66 aa2.26□□□□□ -2.05
NEDD8-203ENST00000524927 TRAV7A0A075B6U4 112 aa2.25□□□□□ -2.05
NEDD8-203ENST00000524927 Q1T7F1 81 aa2.25□□□□□ -2.05
NEDD8-203ENST00000524927 Q6ZQY7 126 aa2.25□□□□□ -2.05
NEDD8-203ENST00000524927 LINC00472Q9H8W2 130 aa2.25□□□□□ -2.05
NEDD8-203ENST00000524927 C14orf132Q9NPU4 83 aa2.25□□□□□ -2.05
NEDD8-203ENST00000524927 CASC2Q6XLA1 102 aa2.24□□□□□ -2.05
NEDD8-203ENST00000524927 LINC00643Q86TS7 51 aa2.24□□□□□ -2.05
NEDD8-203ENST00000524927 CYP4F30PQ9H0H9 118 aa2.24□□□□□ -2.05
NEDD8-203ENST00000524927 LINC00308Q8TCZ7 52 aa2.23□□□□□ -2.05
NEDD8-203ENST00000524927 MT1LQ93083 61 aa2.22□□□□□ -2.05
NEDD8-203ENST00000524927 IFI27L1Q96BM0 104 aa2.22□□□□□ -2.05
NEDD8-203ENST00000524927 TRAV12-1A0A0B4J245 112 aa2.21□□□□□ -2.06
NEDD8-203ENST00000524927 TMEM254Q8TBM7 123 aa2.21□□□□□ -2.06
NEDD8-203ENST00000524927 COX6CP09669 75 aa2.2□□□□□ -2.06
NEDD8-203ENST00000524927 BAALC-AS2P0C853 105 aa2.2□□□□□ -2.06
NEDD8-203ENST00000524927 LINC00575Q6W349 94 aa2.2□□□□□ -2.06
NEDD8-203ENST00000524927 COA5Q86WW8 74 aa2.2□□□□□ -2.06
NEDD8-203ENST00000524927 SPTSSBQ8NFR3 76 aa2.2□□□□□ -2.06
NEDD8-203ENST00000524927 PRO1854Q9UHT4 67 aa2.2□□□□□ -2.06
NEDD8-203ENST00000524927 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.19□□□□□ -2.06
NEDD8-203ENST00000524927 COX8AP10176 69 aa2.18□□□□□ -2.06
NEDD8-203ENST00000524927 Q6ZQT0 140 aa2.18□□□□□ -2.06
NEDD8-203ENST00000524927 PLNP26678 52 aa2.17□□□□□ -2.06
NEDD8-203ENST00000524927 ROMO1P60602 79 aa2.17□□□□□ -2.06
NEDD8-203ENST00000524927 HIGD1BQ9P298 99 aa2.17□□□□□ -2.06
NEDD8-203ENST00000524927 HCG22E2RYF7 251 aa2.16□□□□□ -2.06
NEDD8-203ENST00000524927 KRTAP19-5Q3LI72 72 aa2.16□□□□□ -2.06
NEDD8-203ENST00000524927 CDC42SE1Q9NRR8 79 aa2.16□□□□□ -2.06
NEDD8-203ENST00000524927 ATP5EP2Q5VTU8 51 aa2.15□□□□□ -2.07
NEDD8-203ENST00000524927 CHKB-CPT1BH3BT56 60 aa2.14□□□□□ -2.07
NEDD8-203ENST00000524927 H7BZZ5 65 aa2.14□□□□□ -2.07
NEDD8-203ENST00000524927 SMIM11BQ8TCY0 68 aa2.14□□□□□ -2.07
NEDD8-203ENST00000524927 TRBV7-4A0A0J9YYF1 115 aa2.13□□□□□ -2.07
NEDD8-203ENST00000524927 MIR22HGQ0VDD5 57 aa2.13□□□□□ -2.07
NEDD8-203ENST00000524927 C20orf197Q8N268 126 aa2.13□□□□□ -2.07
NEDD8-203ENST00000524927 LEPROTL1O95214 131 aa2.12□□□□□ -2.07
NEDD8-203ENST00000524927 ATXN8Q156A1 80 aa2.12□□□□□ -2.07
NEDD8-203ENST00000524927 TRAV22A0A0B4J277 110 aa2.1□□□□□ -2.07
NEDD8-203ENST00000524927 NDUFB1O75438 58 aa2.09□□□□□ -2.07
NEDD8-203ENST00000524927 MUSTN1Q8IVN3 82 aa2.09□□□□□ -2.07
NEDD8-203ENST00000524927 DMAC1Q96GE9 116 aa2.09□□□□□ -2.07
NEDD8-203ENST00000524927 ORMDL1Q9P0S3 153 aa2.07□□□□□ -2.08
NEDD8-203ENST00000524927 LOC101927531A0A1B0GV80 90 aa2.06□□□□□ -2.08
NEDD8-203ENST00000524927 M0QZ58 72 aa2.06□□□□□ -2.08
NEDD8-203ENST00000524927 DNAL4O96015 105 aa2.06□□□□□ -2.08
NEDD8-203ENST00000524927 MRPL34Q9BQ48 92 aaKnown RBP2.04□□□□□ -2.08
NEDD8-203ENST00000524927 PRR15LQ9BU68 103 aa2.02□□□□□ -2.09
NEDD8-203ENST00000524927 PHGR1C9JFL3 82 aa2□□□□□ -2.09
NEDD8-203ENST00000524927 UQCR11O14957 56 aa2□□□□□ -2.09
NEDD8-203ENST00000524927 A0A087WVE0 104 aa1.98□□□□□ -2.09
NEDD8-203ENST00000524927 KRTAP6-2Q3LI66 62 aa1.98□□□□□ -2.09
NEDD8-203ENST00000524927 UBL5Q9BZL1 73 aa1.98□□□□□ -2.09
NEDD8-203ENST00000524927 SNURFQ9Y675 71 aa1.98□□□□□ -2.09
NEDD8-203ENST00000524927 JMJD7-PLA2G4BH0Y9G9 81 aa1.97□□□□□ -2.09
NEDD8-203ENST00000524927 LINC01558Q9Y6Z2 57 aa1.97□□□□□ -2.09
NEDD8-203ENST00000524927 A0A0D9SG42 100 aa1.96□□□□□ -2.1
NEDD8-203ENST00000524927 C10orf95Q9H7T3 257 aa1.96□□□□□ -2.1
NEDD8-203ENST00000524927 NREPQ16612 68 aa1.95□□□□□ -2.1
NEDD8-203ENST00000524927 LINC00208Q96KT6 92 aa1.95□□□□□ -2.1
NEDD8-203ENST00000524927 MMP24-AS1A0A0U1RRL7 71 aa1.94□□□□□ -2.1
NEDD8-203ENST00000524927 H0Y9P7 68 aa1.94□□□□□ -2.1
NEDD8-203ENST00000524927 H0YGX0 51 aa1.94□□□□□ -2.1
NEDD8-203ENST00000524927 KRTAP6-1Q3LI64 71 aa1.9□□□□□ -2.11
NEDD8-203ENST00000524927 MT1AP04731 61 aa1.89□□□□□ -2.11
NEDD8-203ENST00000524927 SPATA8Q6RVD6 105 aa1.88□□□□□ -2.11
NEDD8-203ENST00000524927 ACYP2P14621 99 aa1.87□□□□□ -2.11
NEDD8-203ENST00000524927 LOC110117498A0A087WWA1 95 aa1.85□□□□□ -2.11
NEDD8-203ENST00000524927 INE1O15225 51 aa1.85□□□□□ -2.11
NEDD8-203ENST00000524927 A0A1B0GU69 56 aa1.84□□□□□ -2.11
NEDD8-203ENST00000524927 TP53AIP1Q9HCN2 124 aa1.67□□□□□ -2.14
NEDD8-203ENST00000524927 KRTAP21-1Q3LI58 79 aa1.55□□□□□ -2.16
NEDD8-203ENST00000524927 TNP1P09430 55 aa1.49□□□□□ -2.17
NEDD8-203ENST00000524927 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.23
NEDD8-203ENST00000524927 PRM1P04553 51 aa0.85□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 9.1 ms