RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 TNP1P09430 55 aa0.61□□□□□ -2.31
RNU4-60P-201ENST00000517239 DEFB110Q30KQ9 67 aa0.61□□□□□ -2.31
RNU4-60P-201ENST00000517239 LRP1BQ9NZR2 4599 aa0.6□□□□□ -2.31
RNU4-60P-201ENST00000517239 FCGBPQ9Y6R7 5405 aaPredicted RBP0.6□□□□□ -2.31
RNU4-60P-201ENST00000517239 DNAH17Q9UFH2 4485 aa0.6□□□□□ -2.31
RNU4-60P-201ENST00000517239 MUC5BQ9HC84 5762 aaPredicted RBP0.6□□□□□ -2.31
RNU4-60P-201ENST00000517239 LPAP08519 4548 aa0.59□□□□□ -2.32
RNU4-60P-201ENST00000517239 KMT2DO14686 5537 aa0.58□□□□□ -2.32
RNU4-60P-201ENST00000517239 CD52P31358 61 aa0.58□□□□□ -2.32
RNU4-60P-201ENST00000517239 SPRR2BP35325 72 aa0.58□□□□□ -2.32
RNU4-60P-201ENST00000517239 DSTQ03001 7570 aaKnown RBP0.58□□□□□ -2.32
RNU4-60P-201ENST00000517239 SYNE1Q8NF91 8797 aaKnown RBP0.58□□□□□ -2.32
RNU4-60P-201ENST00000517239 TOMM7Q9P0U1 55 aa0.57□□□□□ -2.32
RNU4-60P-201ENST00000517239 LEAP2Q969E1 77 aa0.56□□□□□ -2.32
RNU4-60P-201ENST00000517239 MDN1Q9NU22 5596 aa0.55□□□□□ -2.32
RNU4-60P-201ENST00000517239 HMCN1Q96RW7 5635 aa0.54□□□□□ -2.32
RNU4-60P-201ENST00000517239 DNAH8Q96JB1 4490 aa0.53□□□□□ -2.32
RNU4-60P-201ENST00000517239 STATHP02808 62 aa0.52□□□□□ -2.33
RNU4-60P-201ENST00000517239 DEFB133Q30KQ1 61 aa0.52□□□□□ -2.33
RNU4-60P-201ENST00000517239 MUC5ACP98088 5654 aa0.51□□□□□ -2.33
RNU4-60P-201ENST00000517239 ARHGAP5-AS1Q96IT6 56 aa0.51□□□□□ -2.33
RNU4-60P-201ENST00000517239 MUC16Q8WXI7 14507 aa0.5□□□□□ -2.33
RNU4-60P-201ENST00000517239 SMR3BP02814 79 aaPredicted RBP0.5□□□□□ -2.33
RNU4-60P-201ENST00000517239 MUC17Q685J3 4493 aa0.5□□□□□ -2.33
RNU4-60P-201ENST00000517239 KRTAP6-2Q3LI66 62 aa0.49□□□□□ -2.33
RNU4-60P-201ENST00000517239 Q9Y3F1 56 aa0.48□□□□□ -2.33
RNU4-60P-201ENST00000517239 FLGP20930 4061 aaPredicted RBP0.48□□□□□ -2.33
RNU4-60P-201ENST00000517239 SPART-AS1P0CW21 52 aa0.47□□□□□ -2.33
RNU4-60P-201ENST00000517239 SPRR2AP35326 72 aa0.47□□□□□ -2.33
RNU4-60P-201ENST00000517239 KRTAP5-10Q6L8G5 202 aa0.47□□□□□ -2.33
RNU4-60P-201ENST00000517239 SPRR2EP22531 72 aa0.44□□□□□ -2.34
RNU4-60P-201ENST00000517239 KRTAP19-6Q3LI70 58 aa0.44□□□□□ -2.34
RNU4-60P-201ENST00000517239 DEFB108AA8MXU0 73 aa0.43□□□□□ -2.34
RNU4-60P-201ENST00000517239 MT4P47944 62 aa0.43□□□□□ -2.34
RNU4-60P-201ENST00000517239 MT1HL1P0DM35 61 aa0.42□□□□□ -2.34
RNU4-60P-201ENST00000517239 TTTY10Q9BZA0 68 aa0.42□□□□□ -2.34
RNU4-60P-201ENST00000517239 PHGR1C9JFL3 82 aa0.41□□□□□ -2.34
RNU4-60P-201ENST00000517239 MT1AP04731 61 aa0.41□□□□□ -2.34
RNU4-60P-201ENST00000517239 DEFB104AQ8WTQ1 72 aa0.41□□□□□ -2.34
RNU4-60P-201ENST00000517239 MT1HP80294 61 aa0.39□□□□□ -2.35
RNU4-60P-201ENST00000517239 SPRR2FQ96RM1 72 aa0.39□□□□□ -2.35
RNU4-60P-201ENST00000517239 H3BSH0 61 aa0.38□□□□□ -2.35
RNU4-60P-201ENST00000517239 DEFB136Q30KP8 78 aa0.38□□□□□ -2.35
RNU4-60P-201ENST00000517239 KRTAP8-1Q8IUC2 63 aa0.38□□□□□ -2.35
RNU4-60P-201ENST00000517239 DEFB4AO15263 64 aa0.37□□□□□ -2.35
RNU4-60P-201ENST00000517239 LINC01590Q5TEZ4 76 aa0.37□□□□□ -2.35
RNU4-60P-201ENST00000517239 PRCDQ00LT1 54 aa0.35□□□□□ -2.35
RNU4-60P-201ENST00000517239 DEFB108BQ8NET1 73 aa0.35□□□□□ -2.35
RNU4-60P-201ENST00000517239 MT1FP04733 61 aa0.34□□□□□ -2.36
RNU4-60P-201ENST00000517239 H3BUX3 64 aa0.33□□□□□ -2.36
RNU4-60P-201ENST00000517239 KRTAP19-2Q3LHN2 52 aa0.33□□□□□ -2.36
RNU4-60P-201ENST00000517239 MT2AP02795 61 aa0.32□□□□□ -2.36
RNU4-60P-201ENST00000517239 HTN3P15516 51 aa0.32□□□□□ -2.36
RNU4-60P-201ENST00000517239 KRTAP19-5Q3LI72 72 aa0.3□□□□□ -2.36
RNU4-60P-201ENST00000517239 KRTAP20-2Q3LI61 65 aa0.27□□□□□ -2.37
RNU4-60P-201ENST00000517239 APELAP0DMC3 54 aa0.26□□□□□ -2.37
RNU4-60P-201ENST00000517239 DEFB1P60022 68 aa0.26□□□□□ -2.37
RNU4-60P-201ENST00000517239 COX14Q96I36 57 aa0.26□□□□□ -2.37
RNU4-60P-201ENST00000517239 K7EIM0 57 aa0.24□□□□□ -2.37
RNU4-60P-201ENST00000517239 SPRR2GQ9BYE4 73 aa0.24□□□□□ -2.37
RNU4-60P-201ENST00000517239 A0A096LPF7 62 aa0.23□□□□□ -2.37
RNU4-60P-201ENST00000517239 MT1BP07438 61 aa0.21□□□□□ -2.38
RNU4-60P-201ENST00000517239 RHPN1-AS1Q9BWJ2 59 aa0.21□□□□□ -2.38
RNU4-60P-201ENST00000517239 LINC01556Q5JQF7 62 aa0.18□□□□□ -2.38
RNU4-60P-201ENST00000517239 A0A096LNI7 61 aa0.17□□□□□ -2.38
RNU4-60P-201ENST00000517239 HTN1P15515 57 aa0.16□□□□□ -2.38
RNU4-60P-201ENST00000517239 MT1MQ8N339 61 aa0.16□□□□□ -2.38
RNU4-60P-201ENST00000517239 TMEM167AQ8TBQ9 72 aa0.16□□□□□ -2.38
RNU4-60P-201ENST00000517239 MT1XP80297 61 aa0.15□□□□□ -2.39
RNU4-60P-201ENST00000517239 MT1EP04732 61 aa0.14□□□□□ -2.39
RNU4-60P-201ENST00000517239 MT1GP13640 62 aa0.14□□□□□ -2.39
RNU4-60P-201ENST00000517239 KRTAP6-1Q3LI64 71 aa0.12□□□□□ -2.39
RNU4-60P-201ENST00000517239 KRTAP19-7Q3SYF9 63 aa0.12□□□□□ -2.39
RNU4-60P-201ENST00000517239 KRTAP19-8Q3LI54 63 aa0.11□□□□□ -2.39
RNU4-60P-201ENST00000517239 MT1LQ93083 61 aa0.1□□□□□ -2.39
RNU4-60P-201ENST00000517239 RPL39P5Q59GN2 51 aa0.09□□□□□ -2.4
RNU4-60P-201ENST00000517239 RPS29P62273 56 aaKnown RBP0.08□□□□□ -2.4
Retrieved 77 of 20,778 RNA–protein pairs in 69 ms