RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 BORCS7-ASMTA0A0B4J1R7 106 aa-1.74□□□□□ -2.69
SCARNA1-201ENST00000517138 C12orf73Q69YU5 71 aa-1.74□□□□□ -2.69
SCARNA1-201ENST00000517138 UMAD1C9J7I0 102 aa-1.75□□□□□ -2.69
SCARNA1-201ENST00000517138 PLNP26678 52 aa-1.75□□□□□ -2.69
SCARNA1-201ENST00000517138 H0YGX0 51 aa-1.76□□□□□ -2.69
SCARNA1-201ENST00000517138 SNCGO76070 127 aa-1.76□□□□□ -2.69
SCARNA1-201ENST00000517138 MT-ND4LP03901 98 aa-1.76□□□□□ -2.69
SCARNA1-201ENST00000517138 MAGOHBQ96A72 148 aaKnown RBP-1.76□□□□□ -2.69
SCARNA1-201ENST00000517138 TCEAL7Q9BRU2 100 aa-1.76□□□□□ -2.69
SCARNA1-201ENST00000517138 CCDC167Q9P0B6 97 aa-1.76□□□□□ -2.69
SCARNA1-201ENST00000517138 KRTDAPP60985 99 aa-1.77□□□□□ -2.69
SCARNA1-201ENST00000517138 UBL5Q9BZL1 73 aa-1.77□□□□□ -2.69
SCARNA1-201ENST00000517138 CCDC179H3BU77 68 aa-1.78□□□□□ -2.69
SCARNA1-201ENST00000517138 UQCR11O14957 56 aa-1.78□□□□□ -2.69
SCARNA1-201ENST00000517138 GNG4P50150 75 aa-1.78□□□□□ -2.69
SCARNA1-201ENST00000517138 PMCHL1Q16048 86 aa-1.78□□□□□ -2.69
SCARNA1-201ENST00000517138 NAP1L6A6NFF2 107 aa-1.8□□□□□ -2.7
SCARNA1-201ENST00000517138 LINC01549A6NIU2 74 aa-1.8□□□□□ -2.7
SCARNA1-201ENST00000517138 PMCHL2Q9BQD1 86 aa-1.8□□□□□ -2.7
SCARNA1-201ENST00000517138 SMIM3Q9BZL3 60 aa-1.8□□□□□ -2.7
SCARNA1-201ENST00000517138 V9GYH0 126 aa-1.8□□□□□ -2.7
SCARNA1-201ENST00000517138 CTXND1A0A1B0GTU2 59 aa-1.81□□□□□ -2.7
SCARNA1-201ENST00000517138 DPM2O94777 84 aa-1.81□□□□□ -2.7
SCARNA1-201ENST00000517138 MPC2O95563 127 aa-1.81□□□□□ -2.7
SCARNA1-201ENST00000517138 NDUFB6O95139 128 aa-1.82□□□□□ -2.7
SCARNA1-201ENST00000517138 COPS9Q8WXC6 57 aa-1.82□□□□□ -2.7
SCARNA1-201ENST00000517138 S100A16Q96FQ6 103 aaKnown RBP-1.82□□□□□ -2.7
SCARNA1-201ENST00000517138 EFCAB10A6NFE3 127 aa-1.84□□□□□ -2.7
SCARNA1-201ENST00000517138 PIGBOS1A0A0B4J2F0 54 aa-1.85□□□□□ -2.71
SCARNA1-201ENST00000517138 LINC01545Q5VT33 79 aa-1.85□□□□□ -2.71
SCARNA1-201ENST00000517138 DEFB107AQ8IZN7 70 aa-1.85□□□□□ -2.71
SCARNA1-201ENST00000517138 SMCO4Q9NRQ5 59 aa-1.86□□□□□ -2.71
SCARNA1-201ENST00000517138 GNGT1P63211 74 aa-1.87□□□□□ -2.71
SCARNA1-201ENST00000517138 SERF2P84101 59 aa-1.87□□□□□ -2.71
SCARNA1-201ENST00000517138 SMIM4Q8WVI0 70 aa-1.87□□□□□ -2.71
SCARNA1-201ENST00000517138 APOC3P02656 99 aa-1.88□□□□□ -2.71
SCARNA1-201ENST00000517138 GNG13Q9P2W3 67 aa-1.88□□□□□ -2.71
SCARNA1-201ENST00000517138 LINC01558Q9Y6Z2 57 aa-1.89□□□□□ -2.71
SCARNA1-201ENST00000517138 GNGT2O14610 69 aa-1.9□□□□□ -2.71
SCARNA1-201ENST00000517138 AKAIN1P0CW23 69 aa-1.9□□□□□ -2.71
SCARNA1-201ENST00000517138 DR1Q01658 176 aa-1.91□□□□□ -2.72
SCARNA1-201ENST00000517138 MANBALQ9NQG1 85 aa-1.91□□□□□ -2.72
SCARNA1-201ENST00000517138 C18orf32Q8TCD1 76 aa-1.92□□□□□ -2.72
SCARNA1-201ENST00000517138 SMIM6P0DI80 62 aa-1.93□□□□□ -2.72
SCARNA1-201ENST00000517138 PRO1854Q9UHT4 67 aa-1.93□□□□□ -2.72
SCARNA1-201ENST00000517138 ATXN8Q156A1 80 aa-1.95□□□□□ -2.72
SCARNA1-201ENST00000517138 SMIM31A0A1B0GVY4 71 aa-1.96□□□□□ -2.72
SCARNA1-201ENST00000517138 ADIRFQ15847 76 aa-1.96□□□□□ -2.72
SCARNA1-201ENST00000517138 COX6CP09669 75 aa-1.97□□□□□ -2.72
SCARNA1-201ENST00000517138 FAM25AB3EWG3 89 aa-1.98□□□□□ -2.73
SCARNA1-201ENST00000517138 FAM25CB3EWG5 89 aa-1.98□□□□□ -2.73
SCARNA1-201ENST00000517138 FAM25GB3EWG6 89 aa-1.98□□□□□ -2.73
SCARNA1-201ENST00000517138 PEA15Q15121 130 aa-1.98□□□□□ -2.73
SCARNA1-201ENST00000517138 FAUP35544 74 aaKnown RBP-2.02□□□□□ -2.73
SCARNA1-201ENST00000517138 TOMM5Q8N4H5 51 aa-2.03□□□□□ -2.73
SCARNA1-201ENST00000517138 VAMP8Q9BV40 100 aa-2.03□□□□□ -2.73
SCARNA1-201ENST00000517138 ATP5EP2Q5VTU8 51 aa-2.05□□□□□ -2.74
SCARNA1-201ENST00000517138 ETDBQ3ZM63 59 aa-2.06□□□□□ -2.74
SCARNA1-201ENST00000517138 C8orf59Q8N0T1 100 aaPredicted RBP-2.08□□□□□ -2.74
SCARNA1-201ENST00000517138 UQCR10Q9UDW1 63 aa-2.1□□□□□ -2.75
SCARNA1-201ENST00000517138 DLEU1O43261 78 aa-2.13□□□□□ -2.75
SCARNA1-201ENST00000517138 C14orf144Q96I85 54 aa-2.13□□□□□ -2.75
SCARNA1-201ENST00000517138 S100A1P23297 94 aa-2.14□□□□□ -2.75
SCARNA1-201ENST00000517138 LINC00643Q86TS7 51 aa-2.16□□□□□ -2.76
SCARNA1-201ENST00000517138 KANTRA0A1W2PQU2 76 aa-2.18□□□□□ -2.76
SCARNA1-201ENST00000517138 GNG11P61952 73 aa-2.19□□□□□ -2.76
SCARNA1-201ENST00000517138 Q9H521 79 aa-2.22□□□□□ -2.76
SCARNA1-201ENST00000517138 COL5A1-AS1Q5SY13 56 aa-2.27□□□□□ -2.77
SCARNA1-201ENST00000517138 J3QR89 54 aa-2.28□□□□□ -2.77
SCARNA1-201ENST00000517138 K7ERU9 68 aa-2.3□□□□□ -2.78
SCARNA1-201ENST00000517138 ATP5EP56381 51 aaPredicted RBP-2.31□□□□□ -2.78
SCARNA1-201ENST00000517138 M0R143 59 aa-2.37□□□□□ -2.79
SCARNA1-201ENST00000517138 PYY3Q5JQD4 70 aa-2.38□□□□□ -2.79
SCARNA1-201ENST00000517138 SVBPQ8N300 66 aa-2.45□□□□□ -2.8
SCARNA1-201ENST00000517138 GTF2H5Q6ZYL4 71 aa-2.48□□□□□ -2.81
SCARNA1-201ENST00000517138 A0A1B0GV90 55 aa-2.66□□□□□ -2.84
SCARNA1-201ENST00000517138 LOC105371267A0A1B0GV96 52 aa-2.86□□□□□ -2.87
Retrieved 77 of 20,778 RNA–protein pairs in 6.3 ms