RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 SERF2P84101 59 aa-7.87□□□□□ -3.67
RNU6-539P-201ENST00000516665 S100ZQ8WXG8 99 aa-7.87□□□□□ -3.67
RNU6-539P-201ENST00000516665 AGLP35573 1532 aa-7.88□□□□□ -3.67
RNU6-539P-201ENST00000516665 ABCC1P33527 1531 aa-7.88□□□□□ -3.67
RNU6-539P-201ENST00000516665 S100A12P80511 92 aa-7.89□□□□□ -3.67
RNU6-539P-201ENST00000516665 H0YGX0 51 aa-7.91□□□□□ -3.68
RNU6-539P-201ENST00000516665 TOMM7Q9P0U1 55 aa-7.91□□□□□ -3.68
RNU6-539P-201ENST00000516665 CFAP74Q9C0B2 1584 aa-7.92□□□□□ -3.68
RNU6-539P-201ENST00000516665 ST20Q9HBF5 79 aa-7.93□□□□□ -3.68
RNU6-539P-201ENST00000516665 LINC01549A6NIU2 74 aa-7.94□□□□□ -3.68
RNU6-539P-201ENST00000516665 M0R143 59 aa-7.94□□□□□ -3.68
RNU6-539P-201ENST00000516665 UGGT1Q9NYU2 1555 aa-7.95□□□□□ -3.68
RNU6-539P-201ENST00000516665 HILPDAQ9Y5L2 63 aa-7.96□□□□□ -3.68
RNU6-539P-201ENST00000516665 ABCA6Q8N139 1617 aa-7.97□□□□□ -3.69
RNU6-539P-201ENST00000516665 EFCAB10A6NFE3 127 aa-7.99□□□□□ -3.69
RNU6-539P-201ENST00000516665 CLTCL1P53675 1640 aa-8□□□□□ -3.69
RNU6-539P-201ENST00000516665 ADIRFQ15847 76 aa-8□□□□□ -3.69
RNU6-539P-201ENST00000516665 LINC01556Q5JQF7 62 aa-8□□□□□ -3.69
RNU6-539P-201ENST00000516665 ATP6V1G2-DDX39BF2Z307 99 aa-8.02□□□□□ -3.69
RNU6-539P-201ENST00000516665 GNG13Q9P2W3 67 aa-8.02□□□□□ -3.69
RNU6-539P-201ENST00000516665 C18orf32Q8TCD1 76 aa-8.03□□□□□ -3.69
RNU6-539P-201ENST00000516665 Q9H521 79 aa-8.03□□□□□ -3.69
RNU6-539P-201ENST00000516665 DCAF1Q9Y4B6 1507 aa-8.05□□□□□ -3.7
RNU6-539P-201ENST00000516665 TRPM2O94759 1503 aa-8.07□□□□□ -3.7
RNU6-539P-201ENST00000516665 ABCA9Q8IUA7 1624 aa-8.08□□□□□ -3.7
RNU6-539P-201ENST00000516665 ADCY10Q96PN6 1610 aa-8.1□□□□□ -3.71
RNU6-539P-201ENST00000516665 PRXQ9BXM0 1461 aa-8.13□□□□□ -3.71
RNU6-539P-201ENST00000516665 PKIAP61925 76 aa-8.19□□□□□ -3.72
RNU6-539P-201ENST00000516665 V9GYS6 101 aa-8.23□□□□□ -3.73
RNU6-539P-201ENST00000516665 PLNP26678 52 aa-8.24□□□□□ -3.73
RNU6-539P-201ENST00000516665 PDCD5O14737 125 aa-8.25□□□□□ -3.73
RNU6-539P-201ENST00000516665 S100A13Q99584 98 aa-8.29□□□□□ -3.74
RNU6-539P-201ENST00000516665 ABCA5Q8WWZ7 1642 aa-8.3□□□□□ -3.74
RNU6-539P-201ENST00000516665 DUOX1Q9NRD9 1551 aa-8.38□□□□□ -3.75
RNU6-539P-201ENST00000516665 IQGAP1P46940 1657 aa-8.39□□□□□ -3.75
RNU6-539P-201ENST00000516665 NDUFA1O15239 70 aa-8.39□□□□□ -3.75
RNU6-539P-201ENST00000516665 CPS1P31327 1500 aa-8.43□□□□□ -3.76
RNU6-539P-201ENST00000516665 IQGAP3Q86VI3 1631 aa-8.51□□□□□ -3.77
RNU6-539P-201ENST00000516665 TOP2AP11388 1531 aaKnown RBP-8.54□□□□□ -3.78
RNU6-539P-201ENST00000516665 ERICH3Q5RHP9 1530 aa-8.67□□□□□ -3.8
RNU6-539P-201ENST00000516665 UGGT2Q9NYU1 1516 aa-8.7□□□□□ -3.8
RNU6-539P-201ENST00000516665 H3BUX3 64 aa-8.76□□□□□ -3.81
RNU6-539P-201ENST00000516665 RPL39P62891 51 aaKnown RBP-8.76□□□□□ -3.81
RNU6-539P-201ENST00000516665 APELAP0DMC3 54 aa-8.79□□□□□ -3.82
RNU6-539P-201ENST00000516665 ABCA10Q8WWZ4 1543 aa-8.8□□□□□ -3.82
RNU6-539P-201ENST00000516665 SAMD9LQ8IVG5 1584 aa-8.86□□□□□ -3.83
RNU6-539P-201ENST00000516665 ATP7AQ04656 1500 aa-8.87□□□□□ -3.83
RNU6-539P-201ENST00000516665 FANCD2Q9BXW9 1451 aa-8.9□□□□□ -3.83
RNU6-539P-201ENST00000516665 SMCO4Q9NRQ5 59 aa-8.91□□□□□ -3.84
RNU6-539P-201ENST00000516665 A0A096LPF7 62 aa-8.92□□□□□ -3.84
RNU6-539P-201ENST00000516665 ABCC8Q09428 1581 aa-8.95□□□□□ -3.84
RNU6-539P-201ENST00000516665 RPL39LQ96EH5 51 aaKnown RBP-8.97□□□□□ -3.85
RNU6-539P-201ENST00000516665 A0A087WWC5 75 aa-8.98□□□□□ -3.85
RNU6-539P-201ENST00000516665 CCDC18Q5T9S5 1454 aa-9.02□□□□□ -3.85
RNU6-539P-201ENST00000516665 EFCAB5A4FU69 1503 aa-9.06□□□□□ -3.86
RNU6-539P-201ENST00000516665 CMC2Q9NRP2 79 aa-9.07□□□□□ -3.86
RNU6-539P-201ENST00000516665 HTN3P15516 51 aa-9.09□□□□□ -3.86
RNU6-539P-201ENST00000516665 MROH2BQ7Z745 1585 aa-9.15□□□□□ -3.87
RNU6-539P-201ENST00000516665 GNG2P59768 71 aa-9.33□□□□□ -3.9
RNU6-539P-201ENST00000516665 SMIM5Q71RC9 77 aa-9.37□□□□□ -3.91
RNU6-539P-201ENST00000516665 K7EIM0 57 aa-9.49□□□□□ -3.93
RNU6-539P-201ENST00000516665 PRCDQ00LT1 54 aa-9.55□□□□□ -3.94
RNU6-539P-201ENST00000516665 H3BSH0 61 aa-9.56□□□□□ -3.94
RNU6-539P-201ENST00000516665 TMEM167AQ8TBQ9 72 aa-9.63□□□□□ -3.95
RNU6-539P-201ENST00000516665 ARHGAP5-AS1Q96IT6 56 aa-9.79□□□□□ -3.98
RNU6-539P-201ENST00000516665 Q9Y3F1 56 aa-9.89□□□□□ -3.99
RNU6-539P-201ENST00000516665 SNRPGP15A8MWD9 76 aa-9.92□□□□□ -4
RNU6-539P-201ENST00000516665 IQGAP2Q13576 1575 aa-10.01□□□□□ -4.01
RNU6-539P-201ENST00000516665 COX14Q96I36 57 aa-10.23□□□□□ -4.05
RNU6-539P-201ENST00000516665 RPL39P5Q59GN2 51 aa-10.42□□□□□ -4.08
RNU6-539P-201ENST00000516665 DEFB108AA8MXU0 73 aa-10.5□□□□□ -4.09
RNU6-539P-201ENST00000516665 SNRPGP62308 76 aaKnown RBP-10.55□□□□□ -4.1
RNU6-539P-201ENST00000516665 DEFB108BQ8NET1 73 aa-10.58□□□□□ -4.1
RNU6-539P-201ENST00000516665 TOMM5Q8N4H5 51 aa-10.59□□□□□ -4.1
RNU6-539P-201ENST00000516665 STATHP02808 62 aa-10.72□□□□□ -4.13
RNU6-539P-201ENST00000516665 SMIM31A0A1B0GVY4 71 aa-10.79□□□□□ -4.14
RNU6-539P-201ENST00000516665 GCC2Q8IWJ2 1684 aa-10.83□□□□□ -4.14
Retrieved 77 of 20,778 RNA–protein pairs in 11.2 ms