RNA–Protein interactions for RNA: ENST00000514133.1

SGCB-203, Transcript of sarcoglycan beta, humanhuman

TSL 5

Gene SGCB, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-203ENST00000514133 DEFB1P60022 68 aa0.22□□□□□ -2.37
SGCB-203ENST00000514133 NREPQ16612 68 aa0.22□□□□□ -2.37
SGCB-203ENST00000514133 COX6B2Q6YFQ2 88 aa0.22□□□□□ -2.37
SGCB-203ENST00000514133 WFDC10BQ8IUB3 73 aa0.22□□□□□ -2.37
SGCB-203ENST00000514133 LINC01546A6NGU7 62 aa0.21□□□□□ -2.38
SGCB-203ENST00000514133 H3BVH4 76 aa0.21□□□□□ -2.38
SGCB-203ENST00000514133 DEFB130BP0DP73 79 aa0.21□□□□□ -2.38
SGCB-203ENST00000514133 DEFB130AP0DP74 79 aa0.21□□□□□ -2.38
SGCB-203ENST00000514133 RPS27P42677 84 aaKnown RBP0.21□□□□□ -2.38
SGCB-203ENST00000514133 ENHOQ6UWT2 76 aa0.21□□□□□ -2.38
SGCB-203ENST00000514133 CMC2Q9NRP2 79 aa0.21□□□□□ -2.38
SGCB-203ENST00000514133 SMIM27A0A1W2PRY6 76 aa0.2□□□□□ -2.38
SGCB-203ENST00000514133 H0YAA0 97 aa0.2□□□□□ -2.38
SGCB-203ENST00000514133 ATXN8Q156A1 80 aa0.2□□□□□ -2.38
SGCB-203ENST00000514133 KRTAP8-1Q8IUC2 63 aa0.2□□□□□ -2.38
SGCB-203ENST00000514133 NMES1Q9C002 83 aa0.2□□□□□ -2.38
SGCB-203ENST00000514133 KCNQ1DNQ9H478 68 aa0.2□□□□□ -2.38
SGCB-203ENST00000514133 H3BNG1 76 aa0.19□□□□□ -2.38
SGCB-203ENST00000514133 H3BUA1 57 aa0.19□□□□□ -2.38
SGCB-203ENST00000514133 NDUFA4O00483 81 aa0.19□□□□□ -2.38
SGCB-203ENST00000514133 RHPN1-AS1Q9BWJ2 59 aa0.19□□□□□ -2.38
SGCB-203ENST00000514133 NOP10Q9NPE3 64 aaKnown RBP0.19□□□□□ -2.38
SGCB-203ENST00000514133 A0A096LNI7 61 aa0.18□□□□□ -2.38
SGCB-203ENST00000514133 A8MTW9 85 aa0.18□□□□□ -2.38
SGCB-203ENST00000514133 HTN1P15515 57 aa0.18□□□□□ -2.38
SGCB-203ENST00000514133 KRTAP19-8Q3LI54 63 aa0.18□□□□□ -2.38
SGCB-203ENST00000514133 RPL39P5Q59GN2 51 aa0.18□□□□□ -2.38
SGCB-203ENST00000514133 LINC01556Q5JQF7 62 aa0.18□□□□□ -2.38
SGCB-203ENST00000514133 ABRACLQ9P1F3 81 aa0.18□□□□□ -2.38
SGCB-203ENST00000514133 GNG13Q9P2W3 67 aa0.18□□□□□ -2.38
SGCB-203ENST00000514133 TIMM8BQ9Y5J9 83 aaPredicted RBP0.18□□□□□ -2.38
SGCB-203ENST00000514133 ETDCA0A1B0GVM5 59 aa0.17□□□□□ -2.38
SGCB-203ENST00000514133 C9orf92A6NGG3 77 aa0.17□□□□□ -2.38
SGCB-203ENST00000514133 K7EIM0 57 aa0.17□□□□□ -2.38
SGCB-203ENST00000514133 FCER1GP30273 86 aa0.17□□□□□ -2.38
SGCB-203ENST00000514133 LINC00158P58513 81 aa0.17□□□□□ -2.38
SGCB-203ENST00000514133 LINC01590Q5TEZ4 76 aa0.17□□□□□ -2.38
SGCB-203ENST00000514133 TOMM5Q8N4H5 51 aa0.17□□□□□ -2.38
SGCB-203ENST00000514133 SNRPGP62308 76 aaKnown RBP0.16□□□□□ -2.38
SGCB-203ENST00000514133 MT1XP80297 61 aa0.16□□□□□ -2.38
SGCB-203ENST00000514133 SERF2P84101 59 aa0.16□□□□□ -2.38
SGCB-203ENST00000514133 WT1-ASQ06250 92 aa0.16□□□□□ -2.38
SGCB-203ENST00000514133 KRTAP19-7Q3SYF9 63 aa0.16□□□□□ -2.38
SGCB-203ENST00000514133 SPRR2GQ9BYE4 73 aa0.16□□□□□ -2.38
SGCB-203ENST00000514133 TTTY10Q9BZA0 68 aa0.16□□□□□ -2.38
SGCB-203ENST00000514133 PLNP26678 52 aa0.15□□□□□ -2.39
SGCB-203ENST00000514133 PRCDQ00LT1 54 aa0.15□□□□□ -2.39
SGCB-203ENST00000514133 CLPSL2Q6UWE3 100 aa0.15□□□□□ -2.39
SGCB-203ENST00000514133 MT1MQ8N339 61 aa0.15□□□□□ -2.39
SGCB-203ENST00000514133 TMEM167AQ8TBQ9 72 aa0.15□□□□□ -2.39
SGCB-203ENST00000514133 LINC00308Q8TCZ7 52 aa0.15□□□□□ -2.39
SGCB-203ENST00000514133 UBL5Q9BZL1 73 aa0.15□□□□□ -2.39
SGCB-203ENST00000514133 H0YGX0 51 aa0.14□□□□□ -2.39
SGCB-203ENST00000514133 MT1EP04732 61 aa0.14□□□□□ -2.39
SGCB-203ENST00000514133 MT1GP13640 62 aa0.14□□□□□ -2.39
SGCB-203ENST00000514133 IGLV5-48A0A075B6I7 105 aa0.13□□□□□ -2.39
SGCB-203ENST00000514133 NDUFA1O15239 70 aa0.13□□□□□ -2.39
SGCB-203ENST00000514133 POLR2KP53803 58 aaKnown RBP0.13□□□□□ -2.39
SGCB-203ENST00000514133 KRTAP6-1Q3LI64 71 aa0.13□□□□□ -2.39
SGCB-203ENST00000514133 KRTAP6-2Q3LI66 62 aa0.13□□□□□ -2.39
SGCB-203ENST00000514133 S4R3F8 94 aa0.13□□□□□ -2.39
SGCB-203ENST00000514133 IAPPP10997 89 aa0.12□□□□□ -2.39
SGCB-203ENST00000514133 RPL39P62891 51 aaKnown RBP0.12□□□□□ -2.39
SGCB-203ENST00000514133 MT1LQ93083 61 aa0.12□□□□□ -2.39
SGCB-203ENST00000514133 SMIM2Q9BVW6 85 aa0.12□□□□□ -2.39
SGCB-203ENST00000514133 MMP24-AS1A0A0U1RRL7 71 aa0.11□□□□□ -2.39
SGCB-203ENST00000514133 PRLHP81277 87 aa0.11□□□□□ -2.39
SGCB-203ENST00000514133 KRTAP19-5Q3LI72 72 aa0.11□□□□□ -2.39
SGCB-203ENST00000514133 RPL39LQ96EH5 51 aaKnown RBP0.11□□□□□ -2.39
SGCB-203ENST00000514133 ARHGAP5-AS1Q96IT6 56 aa0.11□□□□□ -2.39
SGCB-203ENST00000514133 C6orf48Q9UBA6 75 aa0.11□□□□□ -2.39
SGCB-203ENST00000514133 RPS29P62273 56 aaKnown RBP0.1□□□□□ -2.39
SGCB-203ENST00000514133 TMEM167BQ9NRX6 74 aa0.1□□□□□ -2.39
SGCB-203ENST00000514133 M0QY20 66 aa0.09□□□□□ -2.4
SGCB-203ENST00000514133 MT1AP04731 61 aa0.09□□□□□ -2.4
SGCB-203ENST00000514133 M0QZ58 72 aa0.05□□□□□ -2.4
SGCB-203ENST00000514133 TOMM7Q9P0U1 55 aa0.05□□□□□ -2.4
SGCB-203ENST00000514133 TNP1P09430 55 aa0.02□□□□□ -2.41
Retrieved 78 of 20,778 RNA–protein pairs in 30.9 ms