RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 GNG7O60262 68 aa-0.92□□□□□ -2.56
PDGFC-208ENST00000512711 CYB5AP00167 134 aa-0.92□□□□□ -2.56
PDGFC-208ENST00000512711 SELENOWP63302 87 aa-0.92□□□□□ -2.56
PDGFC-208ENST00000512711 RPL39LQ96EH5 51 aaKnown RBP-0.92□□□□□ -2.56
PDGFC-208ENST00000512711 DPY30Q9C005 99 aa-0.92□□□□□ -2.56
PDGFC-208ENST00000512711 FANCD2Q9BXW9 1451 aa-0.92□□□□□ -2.56
PDGFC-208ENST00000512711 KTN1Q86UP2 1357 aaKnown RBP-0.93□□□□□ -2.56
PDGFC-208ENST00000512711 A0A1B0GUT8 65 aa-0.93□□□□□ -2.56
PDGFC-208ENST00000512711 UMAD1C9J7I0 102 aa-0.93□□□□□ -2.56
PDGFC-208ENST00000512711 MPC2O95563 127 aa-0.93□□□□□ -2.56
PDGFC-208ENST00000512711 VAMP8Q9BV40 100 aa-0.93□□□□□ -2.56
PDGFC-208ENST00000512711 PRO1854Q9UHT4 67 aa-0.93□□□□□ -2.56
PDGFC-208ENST00000512711 RPL39P5Q59GN2 51 aa-0.94□□□□□ -2.56
PDGFC-208ENST00000512711 ARHGAP5-AS1Q96IT6 56 aa-0.94□□□□□ -2.56
PDGFC-208ENST00000512711 CACFD1Q9UGQ2 172 aa-0.94□□□□□ -2.56
PDGFC-208ENST00000512711 KRTDAPP60985 99 aa-0.95□□□□□ -2.56
PDGFC-208ENST00000512711 ST20Q9HBF5 79 aa-0.95□□□□□ -2.56
PDGFC-208ENST00000512711 PAIP2BQ9ULR5 123 aaKnown RBP-0.95□□□□□ -2.56
PDGFC-208ENST00000512711 MYMXA0A1B0GTQ4 84 aa-0.96□□□□□ -2.56
PDGFC-208ENST00000512711 LINC00587B1AMM8 73 aa-0.96□□□□□ -2.56
PDGFC-208ENST00000512711 AKAIN1P0CW23 69 aa-0.96□□□□□ -2.56
PDGFC-208ENST00000512711 ATP5EP56381 51 aaPredicted RBP-0.96□□□□□ -2.56
PDGFC-208ENST00000512711 S100ZQ8WXG8 99 aa-0.96□□□□□ -2.56
PDGFC-208ENST00000512711 TSC22D3Q99576 134 aa-0.96□□□□□ -2.56
PDGFC-208ENST00000512711 GCC2Q8IWJ2 1684 aa-0.97□□□□□ -2.56
PDGFC-208ENST00000512711 IGIPA6NJ69 53 aa-0.97□□□□□ -2.56
PDGFC-208ENST00000512711 SNRPGP15A8MWD9 76 aa-0.97□□□□□ -2.56
PDGFC-208ENST00000512711 H0YGX0 51 aa-0.97□□□□□ -2.56
PDGFC-208ENST00000512711 PEA15Q15121 130 aa-0.97□□□□□ -2.56
PDGFC-208ENST00000512711 PMCHL1Q16048 86 aa-0.97□□□□□ -2.56
PDGFC-208ENST00000512711 ETDBQ3ZM63 59 aa-0.97□□□□□ -2.56
PDGFC-208ENST00000512711 PMCHL2Q9BQD1 86 aa-0.97□□□□□ -2.56
PDGFC-208ENST00000512711 HMGN3Q15651 99 aa-0.98□□□□□ -2.57
PDGFC-208ENST00000512711 IER3IP1Q9Y5U9 82 aa-0.98□□□□□ -2.57
PDGFC-208ENST00000512711 PVALEFA0A1B0GWK0 134 aa-0.99□□□□□ -2.57
PDGFC-208ENST00000512711 CORTO00230 105 aa-0.99□□□□□ -2.57
PDGFC-208ENST00000512711 PLNP26678 52 aa-0.99□□□□□ -2.57
PDGFC-208ENST00000512711 ZNF720Q7Z2F6 126 aa-0.99□□□□□ -2.57
PDGFC-208ENST00000512711 CEBPZOSA8MTT3 80 aa-1□□□□□ -2.57
PDGFC-208ENST00000512711 SERF2P84101 59 aa-1□□□□□ -2.57
PDGFC-208ENST00000512711 SVBPQ8N300 66 aa-1□□□□□ -2.57
PDGFC-208ENST00000512711 TCEAL7Q9BRU2 100 aa-1□□□□□ -2.57
PDGFC-208ENST00000512711 LOC105371267A0A1B0GV96 52 aa-1.01□□□□□ -2.57
PDGFC-208ENST00000512711 S100A1P23297 94 aa-1.01□□□□□ -2.57
PDGFC-208ENST00000512711 SNRPGP62308 76 aaKnown RBP-1.01□□□□□ -2.57
PDGFC-208ENST00000512711 ATXN8Q156A1 80 aa-1.01□□□□□ -2.57
PDGFC-208ENST00000512711 LINC01549A6NIU2 74 aa-1.02□□□□□ -2.57
PDGFC-208ENST00000512711 ATP5EP2Q5VTU8 51 aa-1.02□□□□□ -2.57
PDGFC-208ENST00000512711 HMGN1P05114 100 aa-1.03□□□□□ -2.57
PDGFC-208ENST00000512711 GNGT2O14610 69 aa-1.04□□□□□ -2.58
PDGFC-208ENST00000512711 FAUP35544 74 aaKnown RBP-1.04□□□□□ -2.58
PDGFC-208ENST00000512711 SMIM11AP58511 58 aa-1.04□□□□□ -2.58
PDGFC-208ENST00000512711 COL5A1-AS1Q5SY13 56 aa-1.04□□□□□ -2.58
PDGFC-208ENST00000512711 V9GYS6 101 aa-1.04□□□□□ -2.58
PDGFC-208ENST00000512711 LINC00643Q86TS7 51 aa-1.05□□□□□ -2.58
PDGFC-208ENST00000512711 SMCO4Q9NRQ5 59 aa-1.05□□□□□ -2.58
PDGFC-208ENST00000512711 GNG13Q9P2W3 67 aa-1.05□□□□□ -2.58
PDGFC-208ENST00000512711 GNG4P50150 75 aa-1.06□□□□□ -2.58
PDGFC-208ENST00000512711 SNRPFP62306 86 aaKnown RBP-1.06□□□□□ -2.58
PDGFC-208ENST00000512711 PPP3R1P63098 170 aa-1.06□□□□□ -2.58
PDGFC-208ENST00000512711 S100A16Q96FQ6 103 aaKnown RBP-1.06□□□□□ -2.58
PDGFC-208ENST00000512711 S100A13Q99584 98 aa-1.06□□□□□ -2.58
PDGFC-208ENST00000512711 DLEU1O43261 78 aa-1.07□□□□□ -2.58
PDGFC-208ENST00000512711 C18orf32Q8TCD1 76 aa-1.08□□□□□ -2.58
PDGFC-208ENST00000512711 CMC2Q9NRP2 79 aa-1.08□□□□□ -2.58
PDGFC-208ENST00000512711 KANTRA0A1W2PQU2 76 aa-1.1□□□□□ -2.59
PDGFC-208ENST00000512711 GNG2P59768 71 aa-1.1□□□□□ -2.59
PDGFC-208ENST00000512711 GTF2H5Q6ZYL4 71 aa-1.1□□□□□ -2.59
PDGFC-208ENST00000512711 C14orf144Q96I85 54 aa-1.1□□□□□ -2.59
PDGFC-208ENST00000512711 GNG8Q9UK08 70 aa-1.1□□□□□ -2.59
PDGFC-208ENST00000512711 ADIRFQ15847 76 aa-1.11□□□□□ -2.59
PDGFC-208ENST00000512711 EFCAB10A6NFE3 127 aa-1.12□□□□□ -2.59
PDGFC-208ENST00000512711 A0A1B0GV90 55 aa-1.14□□□□□ -2.59
PDGFC-208ENST00000512711 PYY3Q5JQD4 70 aa-1.14□□□□□ -2.59
PDGFC-208ENST00000512711 M0R143 59 aa-1.17□□□□□ -2.6
PDGFC-208ENST00000512711 Q9H521 79 aa-1.17□□□□□ -2.6
PDGFC-208ENST00000512711 SMIM31A0A1B0GVY4 71 aa-1.19□□□□□ -2.6
PDGFC-208ENST00000512711 TOMM5Q8N4H5 51 aa-1.2□□□□□ -2.6
Retrieved 78 of 20,778 RNA–protein pairs in 99.3 ms