RNA–Protein interactions for RNA: ENST00000507476.5

LINC01088-203, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3 BASIC

Gene LINC01088, Length 785 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-203ENST00000507476 ACACAQ13085 2346 aa0.47□□□□□ -2.33
LINC01088-203ENST00000507476 APOBP04114 4563 aaKnown RBP0.47□□□□□ -2.33
LINC01088-203ENST00000507476 SNRPGP62308 76 aaKnown RBP0.47□□□□□ -2.33
LINC01088-203ENST00000507476 PKHD1L1Q86WI1 4243 aa0.46□□□□□ -2.34
LINC01088-203ENST00000507476 PHGR1C9JFL3 82 aa0.45□□□□□ -2.34
LINC01088-203ENST00000507476 SPRR2AP35326 72 aa0.45□□□□□ -2.34
LINC01088-203ENST00000507476 VPS13DQ5THJ4 4388 aa0.45□□□□□ -2.34
LINC01088-203ENST00000507476 DNAH5Q8TE73 4624 aa0.44□□□□□ -2.34
LINC01088-203ENST00000507476 DNAH11Q96DT5 4516 aa0.43□□□□□ -2.34
LINC01088-203ENST00000507476 GCC2Q8IWJ2 1684 aa0.43□□□□□ -2.34
LINC01088-203ENST00000507476 DNAH6Q9C0G6 4158 aa0.43□□□□□ -2.34
LINC01088-203ENST00000507476 SMR3BP02814 79 aaPredicted RBP0.42□□□□□ -2.34
LINC01088-203ENST00000507476 POLR2KP53803 58 aaKnown RBP0.42□□□□□ -2.34
LINC01088-203ENST00000507476 KRTAP19-6Q3LI70 58 aa0.41□□□□□ -2.34
LINC01088-203ENST00000507476 DNAH3Q8TD57 4116 aa0.4□□□□□ -2.34
LINC01088-203ENST00000507476 CLPSL2Q6UWE3 100 aa0.4□□□□□ -2.35
LINC01088-203ENST00000507476 DNAH2Q9P225 4427 aa0.4□□□□□ -2.35
LINC01088-203ENST00000507476 DNAH17Q9UFH2 4485 aa0.39□□□□□ -2.35
LINC01088-203ENST00000507476 SPART-AS1P0CW21 52 aa0.39□□□□□ -2.35
LINC01088-203ENST00000507476 SPRR2EP22531 72 aa0.39□□□□□ -2.35
LINC01088-203ENST00000507476 MT4P47944 62 aa0.39□□□□□ -2.35
LINC01088-203ENST00000507476 KRTAP6-2Q3LI66 62 aa0.39□□□□□ -2.35
LINC01088-203ENST00000507476 MUC17Q685J3 4493 aa0.39□□□□□ -2.35
LINC01088-203ENST00000507476 MT1AP04731 61 aa0.37□□□□□ -2.35
LINC01088-203ENST00000507476 FLGP20930 4061 aaPredicted RBP0.36□□□□□ -2.35
LINC01088-203ENST00000507476 SPRR2GQ9BYE4 73 aa0.36□□□□□ -2.35
LINC01088-203ENST00000507476 DNAH8Q96JB1 4490 aa0.36□□□□□ -2.35
LINC01088-203ENST00000507476 RPL39P62891 51 aaKnown RBP0.35□□□□□ -2.35
LINC01088-203ENST00000507476 STATHP02808 62 aa0.33□□□□□ -2.36
LINC01088-203ENST00000507476 DEFB104AQ8WTQ1 72 aa0.32□□□□□ -2.36
LINC01088-203ENST00000507476 SPRR2FQ96RM1 72 aa0.32□□□□□ -2.36
LINC01088-203ENST00000507476 TOMM7Q9P0U1 55 aa0.29□□□□□ -2.36
LINC01088-203ENST00000507476 MT1HL1P0DM35 61 aa0.28□□□□□ -2.36
LINC01088-203ENST00000507476 MT1HP80294 61 aa0.28□□□□□ -2.36
LINC01088-203ENST00000507476 KRTAP8-1Q8IUC2 63 aa0.27□□□□□ -2.37
LINC01088-203ENST00000507476 RPL39LQ96EH5 51 aaKnown RBP0.27□□□□□ -2.37
LINC01088-203ENST00000507476 CD52P31358 61 aa0.26□□□□□ -2.37
LINC01088-203ENST00000507476 DEFB133Q30KQ1 61 aa0.24□□□□□ -2.37
LINC01088-203ENST00000507476 Q9Y3F1 56 aa0.24□□□□□ -2.37
LINC01088-203ENST00000507476 KRTAP20-2Q3LI61 65 aa0.23□□□□□ -2.37
LINC01088-203ENST00000507476 DEFB108AA8MXU0 73 aa0.19□□□□□ -2.38
LINC01088-203ENST00000507476 KRTAP19-5Q3LI72 72 aa0.19□□□□□ -2.38
LINC01088-203ENST00000507476 H3BSH0 61 aa0.18□□□□□ -2.38
LINC01088-203ENST00000507476 MT2AP02795 61 aa0.18□□□□□ -2.38
LINC01088-203ENST00000507476 MT1FP04733 61 aa0.18□□□□□ -2.38
LINC01088-203ENST00000507476 DEFB1P60022 68 aa0.18□□□□□ -2.38
LINC01088-203ENST00000507476 LEAP2Q969E1 77 aa0.18□□□□□ -2.38
LINC01088-203ENST00000507476 KRTAP19-2Q3LHN2 52 aa0.17□□□□□ -2.38
LINC01088-203ENST00000507476 LINC01590Q5TEZ4 76 aa0.14□□□□□ -2.39
LINC01088-203ENST00000507476 DEFB4AO15263 64 aa0.12□□□□□ -2.39
LINC01088-203ENST00000507476 ARHGAP5-AS1Q96IT6 56 aa0.11□□□□□ -2.39
LINC01088-203ENST00000507476 DEFB136Q30KP8 78 aa0.1□□□□□ -2.39
LINC01088-203ENST00000507476 DEFB108BQ8NET1 73 aa0.1□□□□□ -2.39
LINC01088-203ENST00000507476 HTN3P15516 51 aa0.09□□□□□ -2.4
LINC01088-203ENST00000507476 H3BUX3 64 aa0.08□□□□□ -2.4
LINC01088-203ENST00000507476 MT1BP07438 61 aa0.08□□□□□ -2.4
LINC01088-203ENST00000507476 TTTY10Q9BZA0 68 aa0.08□□□□□ -2.4
LINC01088-203ENST00000507476 KRTAP19-7Q3SYF9 63 aa0.07□□□□□ -2.4
LINC01088-203ENST00000507476 MT1MQ8N339 61 aa0.04□□□□□ -2.4
LINC01088-203ENST00000507476 MT1GP13640 62 aa0.02□□□□□ -2.41
LINC01088-203ENST00000507476 KRTAP6-1Q3LI64 71 aa0.02□□□□□ -2.41
LINC01088-203ENST00000507476 MT1EP04732 61 aa0□□□□□ -2.41
LINC01088-203ENST00000507476 APELAP0DMC3 54 aa0□□□□□ -2.41
LINC01088-203ENST00000507476 RPS29P62273 56 aaKnown RBP0□□□□□ -2.41
LINC01088-203ENST00000507476 KRTAP19-8Q3LI54 63 aa0□□□□□ -2.41
LINC01088-203ENST00000507476 COX14Q96I36 57 aa0□□□□□ -2.41
LINC01088-203ENST00000507476 PRCDQ00LT1 54 aa-0.01□□□□□ -2.41
LINC01088-203ENST00000507476 A0A096LPF7 62 aa-0.02□□□□□ -2.41
LINC01088-203ENST00000507476 MT1XP80297 61 aa-0.02□□□□□ -2.41
LINC01088-203ENST00000507476 LINC01556Q5JQF7 62 aa-0.03□□□□□ -2.41
LINC01088-203ENST00000507476 RHPN1-AS1Q9BWJ2 59 aa-0.03□□□□□ -2.41
LINC01088-203ENST00000507476 MT1LQ93083 61 aa-0.04□□□□□ -2.42
LINC01088-203ENST00000507476 K7EIM0 57 aa-0.07□□□□□ -2.42
LINC01088-203ENST00000507476 A0A096LNI7 61 aa-0.1□□□□□ -2.43
LINC01088-203ENST00000507476 HTN1P15515 57 aa-0.1□□□□□ -2.43
LINC01088-203ENST00000507476 TMEM167AQ8TBQ9 72 aa-0.13□□□□□ -2.43
LINC01088-203ENST00000507476 RPL39P5Q59GN2 51 aa-0.2□□□□□ -2.44
Retrieved 77 of 20,778 RNA–protein pairs in 150 ms