RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 C6orf48Q9UBA6 75 aa0.65□□□□□ -2.31
SNX13-211ENST00000496855 DEFB136Q30KP8 78 aa0.64□□□□□ -2.31
SNX13-211ENST00000496855 PHGR1C9JFL3 82 aa0.63□□□□□ -2.31
SNX13-211ENST00000496855 H3BUX3 64 aa0.63□□□□□ -2.31
SNX13-211ENST00000496855 MT2AP02795 61 aa0.62□□□□□ -2.31
SNX13-211ENST00000496855 MT1FP04733 61 aa0.62□□□□□ -2.31
SNX13-211ENST00000496855 PLNP26678 52 aa0.61□□□□□ -2.31
SNX13-211ENST00000496855 LINC00308Q8TCZ7 52 aa0.61□□□□□ -2.31
SNX13-211ENST00000496855 COX14Q96I36 57 aa0.61□□□□□ -2.31
SNX13-211ENST00000496855 DEFB135Q30KP9 77 aa0.61□□□□□ -2.31
SNX13-211ENST00000496855 CMC2Q9NRP2 79 aa0.61□□□□□ -2.31
SNX13-211ENST00000496855 DEFB4AO15263 64 aa0.6□□□□□ -2.31
SNX13-211ENST00000496855 WT1-ASQ06250 92 aa0.6□□□□□ -2.31
SNX13-211ENST00000496855 S4R3F8 94 aa0.6□□□□□ -2.31
SNX13-211ENST00000496855 H0YGX0 51 aa0.59□□□□□ -2.32
SNX13-211ENST00000496855 KRTAP20-2Q3LI61 65 aa0.58□□□□□ -2.32
SNX13-211ENST00000496855 KRTAP8-1Q8IUC2 63 aa0.56□□□□□ -2.32
SNX13-211ENST00000496855 TMEM167BQ9NRX6 74 aa0.55□□□□□ -2.32
SNX13-211ENST00000496855 DEFB106AQ8N104 65 aa0.54□□□□□ -2.32
SNX13-211ENST00000496855 H0YGG7 62 aa0.54□□□□□ -2.32
SNX13-211ENST00000496855 SMIM27A0A1W2PRY6 76 aa0.53□□□□□ -2.33
SNX13-211ENST00000496855 PRLHP81277 87 aa0.53□□□□□ -2.33
SNX13-211ENST00000496855 LINC01546A6NGU7 62 aa0.52□□□□□ -2.33
SNX13-211ENST00000496855 HTN3P15516 51 aa0.49□□□□□ -2.33
SNX13-211ENST00000496855 SNRPGP62308 76 aaKnown RBP0.48□□□□□ -2.33
SNX13-211ENST00000496855 ABRACLQ9P1F3 81 aa0.48□□□□□ -2.33
SNX13-211ENST00000496855 TIMM8BQ9Y5J9 83 aaPredicted RBP0.48□□□□□ -2.33
SNX13-211ENST00000496855 TOMM5Q8N4H5 51 aa0.47□□□□□ -2.33
SNX13-211ENST00000496855 MT1BP07438 61 aa0.43□□□□□ -2.34
SNX13-211ENST00000496855 SPART-AS1P0CW21 52 aa0.43□□□□□ -2.34
SNX13-211ENST00000496855 KAAG1Q9UBP8 84 aa0.43□□□□□ -2.34
SNX13-211ENST00000496855 LINC01590Q5TEZ4 76 aa0.41□□□□□ -2.34
SNX13-211ENST00000496855 H3BUA1 57 aa0.41□□□□□ -2.34
SNX13-211ENST00000496855 WFDC10BQ8IUB3 73 aa0.4□□□□□ -2.35
SNX13-211ENST00000496855 ARHGAP5-AS1Q96IT6 56 aa0.4□□□□□ -2.35
SNX13-211ENST00000496855 IGLV5-48A0A075B6I7 105 aa0.38□□□□□ -2.35
SNX13-211ENST00000496855 POLR2KP53803 58 aaKnown RBP0.38□□□□□ -2.35
SNX13-211ENST00000496855 SMIM2Q9BVW6 85 aa0.38□□□□□ -2.35
SNX13-211ENST00000496855 NDUFA1O15239 70 aa0.37□□□□□ -2.35
SNX13-211ENST00000496855 PRCDQ00LT1 54 aa0.36□□□□□ -2.35
SNX13-211ENST00000496855 K7EIM0 57 aa0.35□□□□□ -2.35
SNX13-211ENST00000496855 TMEM167AQ8TBQ9 72 aa0.35□□□□□ -2.35
SNX13-211ENST00000496855 TTTY10Q9BZA0 68 aa0.35□□□□□ -2.35
SNX13-211ENST00000496855 M0QY20 66 aa0.35□□□□□ -2.35
SNX13-211ENST00000496855 APELAP0DMC3 54 aa0.35□□□□□ -2.35
SNX13-211ENST00000496855 A0A096LPF7 62 aa0.34□□□□□ -2.36
SNX13-211ENST00000496855 A8MTW9 85 aa0.34□□□□□ -2.36
SNX13-211ENST00000496855 RPL39P62891 51 aaKnown RBP0.34□□□□□ -2.36
SNX13-211ENST00000496855 RPL39LQ96EH5 51 aaKnown RBP0.34□□□□□ -2.36
SNX13-211ENST00000496855 DEFB131AP59861 70 aa0.33□□□□□ -2.36
SNX13-211ENST00000496855 KRTAP19-8Q3LI54 63 aa0.33□□□□□ -2.36
SNX13-211ENST00000496855 H3BNG1 76 aa0.32□□□□□ -2.36
SNX13-211ENST00000496855 KRTAP6-2Q3LI66 62 aa0.32□□□□□ -2.36
SNX13-211ENST00000496855 RPL39P5Q59GN2 51 aa0.32□□□□□ -2.36
SNX13-211ENST00000496855 MMP24-AS1A0A0U1RRL7 71 aa0.31□□□□□ -2.36
SNX13-211ENST00000496855 CLPSL2Q6UWE3 100 aa0.31□□□□□ -2.36
SNX13-211ENST00000496855 LEAP2Q969E1 77 aa0.31□□□□□ -2.36
SNX13-211ENST00000496855 LINC01556Q5JQF7 62 aa0.3□□□□□ -2.36
SNX13-211ENST00000496855 MT1MQ8N339 61 aa0.3□□□□□ -2.36
SNX13-211ENST00000496855 C9orf92A6NGG3 77 aa0.29□□□□□ -2.36
SNX13-211ENST00000496855 MT1GP13640 62 aa0.29□□□□□ -2.36
SNX13-211ENST00000496855 MT1XP80297 61 aa0.29□□□□□ -2.36
SNX13-211ENST00000496855 RHPN1-AS1Q9BWJ2 59 aa0.29□□□□□ -2.36
SNX13-211ENST00000496855 TOMM7Q9P0U1 55 aa0.29□□□□□ -2.36
SNX13-211ENST00000496855 MT1EP04732 61 aa0.28□□□□□ -2.37
SNX13-211ENST00000496855 NOP10Q9NPE3 64 aaKnown RBP0.28□□□□□ -2.37
SNX13-211ENST00000496855 M0QZ58 72 aa0.27□□□□□ -2.37
SNX13-211ENST00000496855 DEFB1P60022 68 aa0.27□□□□□ -2.37
SNX13-211ENST00000496855 KRTAP19-7Q3SYF9 63 aa0.25□□□□□ -2.37
SNX13-211ENST00000496855 A0A096LNI7 61 aa0.24□□□□□ -2.37
SNX13-211ENST00000496855 HTN1P15515 57 aa0.24□□□□□ -2.37
SNX13-211ENST00000496855 RPS29P62273 56 aaKnown RBP0.24□□□□□ -2.37
SNX13-211ENST00000496855 SPRR2GQ9BYE4 73 aa0.24□□□□□ -2.37
SNX13-211ENST00000496855 TNP1P09430 55 aa0.22□□□□□ -2.37
SNX13-211ENST00000496855 KRTAP6-1Q3LI64 71 aa0.19□□□□□ -2.38
SNX13-211ENST00000496855 MT1AP04731 61 aa0.18□□□□□ -2.38
SNX13-211ENST00000496855 KRTAP19-5Q3LI72 72 aa0.18□□□□□ -2.38
SNX13-211ENST00000496855 MT1LQ93083 61 aa0.18□□□□□ -2.38
Retrieved 78 of 20,778 RNA–protein pairs in 35.6 ms