RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 EP400Q96L91 3159 aa-1.2□□□□□ -2.6
CD46-218ENST00000496723 XIRP2A4UGR9 3374 aa-1.21□□□□□ -2.6
CD46-218ENST00000496723 PDCD5O14737 125 aa-1.21□□□□□ -2.6
CD46-218ENST00000496723 SERF2P84101 59 aa-1.21□□□□□ -2.6
CD46-218ENST00000496723 UNC80Q8N2C7 3258 aa-1.21□□□□□ -2.6
CD46-218ENST00000496723 CFAP47Q6ZTR5 3102 aa-1.22□□□□□ -2.6
CD46-218ENST00000496723 DEFB131AP59861 70 aa-1.22□□□□□ -2.6
CD46-218ENST00000496723 CLTCL1P53675 1640 aa-1.23□□□□□ -2.61
CD46-218ENST00000496723 NRXN3Q9Y4C0 1643 aa-1.23□□□□□ -2.61
CD46-218ENST00000496723 CPS1P31327 1500 aa-1.24□□□□□ -2.61
CD46-218ENST00000496723 ABCA10Q8WWZ4 1543 aa-1.24□□□□□ -2.61
CD46-218ENST00000496723 H0YGX0 51 aa-1.24□□□□□ -2.61
CD46-218ENST00000496723 SCRIBQ14160 1630 aa-1.25□□□□□ -2.61
CD46-218ENST00000496723 NFAT5O94916 1531 aa-1.25□□□□□ -2.61
CD46-218ENST00000496723 ABCA5Q8WWZ7 1642 aa-1.26□□□□□ -2.61
CD46-218ENST00000496723 KRTAP19-6Q3LI70 58 aa-1.26□□□□□ -2.61
CD46-218ENST00000496723 A0A087WWC5 75 aa-1.29□□□□□ -2.62
CD46-218ENST00000496723 S100ZQ8WXG8 99 aa-1.29□□□□□ -2.62
CD46-218ENST00000496723 LOC400499M0QZD8 3231 aa-1.29□□□□□ -2.62
CD46-218ENST00000496723 ASPMQ8IZT6 3477 aa-1.3□□□□□ -2.62
CD46-218ENST00000496723 PRXQ9BXM0 1461 aa-1.3□□□□□ -2.62
CD46-218ENST00000496723 PLNP26678 52 aa-1.31□□□□□ -2.62
CD46-218ENST00000496723 SMIM2Q9BVW6 85 aa-1.31□□□□□ -2.62
CD46-218ENST00000496723 TRPM2O94759 1503 aa-1.34□□□□□ -2.62
CD46-218ENST00000496723 ABCC8Q09428 1581 aa-1.34□□□□□ -2.62
CD46-218ENST00000496723 ADCY10Q96PN6 1610 aa-1.35□□□□□ -2.63
CD46-218ENST00000496723 FANCD2Q9BXW9 1451 aa-1.37□□□□□ -2.63
CD46-218ENST00000496723 SMIM5Q71RC9 77 aa-1.39□□□□□ -2.63
CD46-218ENST00000496723 BRCA2P51587 3418 aa-1.4□□□□□ -2.63
CD46-218ENST00000496723 NDUFA1O15239 70 aa-1.4□□□□□ -2.63
CD46-218ENST00000496723 VCANP13611 3396 aa-1.41□□□□□ -2.64
CD46-218ENST00000496723 TTTY10Q9BZA0 68 aa-1.42□□□□□ -2.64
CD46-218ENST00000496723 CMC2Q9NRP2 79 aa-1.43□□□□□ -2.64
CD46-218ENST00000496723 TOMM7Q9P0U1 55 aa-1.43□□□□□ -2.64
CD46-218ENST00000496723 CENPFP49454 3210 aa-1.44□□□□□ -2.64
CD46-218ENST00000496723 CDH23Q9H251 3354 aa-1.45□□□□□ -2.64
CD46-218ENST00000496723 A0A096LNI7 61 aa-1.46□□□□□ -2.64
CD46-218ENST00000496723 DEFB133Q30KQ1 61 aa-1.46□□□□□ -2.64
CD46-218ENST00000496723 DUOX1Q9NRD9 1551 aa-1.47□□□□□ -2.64
CD46-218ENST00000496723 ERICH3Q5RHP9 1530 aa-1.47□□□□□ -2.64
CD46-218ENST00000496723 KRTAP19-2Q3LHN2 52 aa-1.48□□□□□ -2.65
CD46-218ENST00000496723 LINC01590Q5TEZ4 76 aa-1.48□□□□□ -2.65
CD46-218ENST00000496723 RHPN1-AS1Q9BWJ2 59 aa-1.48□□□□□ -2.65
CD46-218ENST00000496723 VPS13AQ96RL7 3174 aa-1.49□□□□□ -2.65
CD46-218ENST00000496723 HTN1P15515 57 aa-1.51□□□□□ -2.65
CD46-218ENST00000496723 RPL39P62891 51 aaKnown RBP-1.53□□□□□ -2.65
CD46-218ENST00000496723 SMIM31A0A1B0GVY4 71 aa-1.54□□□□□ -2.66
CD46-218ENST00000496723 SAMD9LQ8IVG5 1584 aa-1.55□□□□□ -2.66
CD46-218ENST00000496723 TOP2AP11388 1531 aaKnown RBP-1.56□□□□□ -2.66
CD46-218ENST00000496723 RPL39LQ96EH5 51 aaKnown RBP-1.58□□□□□ -2.66
CD46-218ENST00000496723 CD52P31358 61 aa-1.59□□□□□ -2.66
CD46-218ENST00000496723 DEFB124Q8NES8 71 aa-1.59□□□□□ -2.66
CD46-218ENST00000496723 DEFB104AQ8WTQ1 72 aa-1.6□□□□□ -2.67
CD46-218ENST00000496723 IQGAP2Q13576 1575 aa-1.6□□□□□ -2.67
CD46-218ENST00000496723 MROH2BQ7Z745 1585 aa-1.6□□□□□ -2.67
CD46-218ENST00000496723 UTRNP46939 3433 aa-1.61□□□□□ -2.67
CD46-218ENST00000496723 ATP7AQ04656 1500 aa-1.62□□□□□ -2.67
CD46-218ENST00000496723 SNRPGP15A8MWD9 76 aa-1.63□□□□□ -2.67
CD46-218ENST00000496723 LINC01556Q5JQF7 62 aa-1.71□□□□□ -2.68
CD46-218ENST00000496723 TOMM5Q8N4H5 51 aa-1.73□□□□□ -2.69
CD46-218ENST00000496723 H3BUX3 64 aa-1.78□□□□□ -2.69
CD46-218ENST00000496723 K7EIM0 57 aa-1.84□□□□□ -2.7
CD46-218ENST00000496723 GOLGB1Q14789 3259 aaKnown RBP-1.85□□□□□ -2.7
CD46-218ENST00000496723 GCC2Q8IWJ2 1684 aa-1.85□□□□□ -2.71
CD46-218ENST00000496723 APELAP0DMC3 54 aa-1.85□□□□□ -2.71
CD46-218ENST00000496723 A0A096LPF7 62 aa-1.86□□□□□ -2.71
CD46-218ENST00000496723 ARHGAP5-AS1Q96IT6 56 aa-1.89□□□□□ -2.71
CD46-218ENST00000496723 PRCDQ00LT1 54 aa-1.94□□□□□ -2.72
CD46-218ENST00000496723 TMEM167AQ8TBQ9 72 aa-1.97□□□□□ -2.72
CD46-218ENST00000496723 HTN3P15516 51 aa-2□□□□□ -2.73
CD46-218ENST00000496723 SNRPGP62308 76 aaKnown RBP-2.01□□□□□ -2.73
CD46-218ENST00000496723 RPL39P5Q59GN2 51 aa-2.05□□□□□ -2.74
CD46-218ENST00000496723 H3BSH0 61 aa-2.06□□□□□ -2.74
CD46-218ENST00000496723 DEFB108AA8MXU0 73 aa-2.09□□□□□ -2.74
CD46-218ENST00000496723 Q9Y3F1 56 aa-2.19□□□□□ -2.76
CD46-218ENST00000496723 DEFB108BQ8NET1 73 aa-2.3□□□□□ -2.78
CD46-218ENST00000496723 COX14Q96I36 57 aa-2.3□□□□□ -2.78
CD46-218ENST00000496723 STATHP02808 62 aa-2.56□□□□□ -2.82
Retrieved 78 of 20,778 RNA–protein pairs in 10.8 ms