RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 MUC5ACP98088 5654 aa1.3□□□□□ -2.2
SNX13-210ENST00000494402 M0QZ58 72 aa1.3□□□□□ -2.2
SNX13-210ENST00000494402 DNAH3Q8TD57 4116 aa1.3□□□□□ -2.2
SNX13-210ENST00000494402 VPS13BQ7Z7G8 4022 aa1.29□□□□□ -2.2
SNX13-210ENST00000494402 DNAH2Q9P225 4427 aa1.29□□□□□ -2.2
SNX13-210ENST00000494402 HRNRQ86YZ3 2850 aaPredicted RBP1.27□□□□□ -2.21
SNX13-210ENST00000494402 RPL39LQ96EH5 51 aaKnown RBP1.26□□□□□ -2.21
SNX13-210ENST00000494402 H3BNG1 76 aa1.25□□□□□ -2.21
SNX13-210ENST00000494402 DNAH17Q9UFH2 4485 aa1.25□□□□□ -2.21
SNX13-210ENST00000494402 LPAP08519 4548 aa1.21□□□□□ -2.22
SNX13-210ENST00000494402 KRTAP21-1Q3LI58 79 aa1.21□□□□□ -2.22
SNX13-210ENST00000494402 TNP1P09430 55 aa1.19□□□□□ -2.22
SNX13-210ENST00000494402 SPRR2DP22532 72 aa1.18□□□□□ -2.22
SNX13-210ENST00000494402 Q9Y3F1 56 aa1.18□□□□□ -2.22
SNX13-210ENST00000494402 ARHGAP5-AS1Q96IT6 56 aa1.17□□□□□ -2.22
SNX13-210ENST00000494402 MUC17Q685J3 4493 aa1.15□□□□□ -2.22
SNX13-210ENST00000494402 LEAP2Q969E1 77 aa1.15□□□□□ -2.23
SNX13-210ENST00000494402 TOMM7Q9P0U1 55 aa1.15□□□□□ -2.23
SNX13-210ENST00000494402 KRTAP19-6Q3LI70 58 aa1.13□□□□□ -2.23
SNX13-210ENST00000494402 SMR3BP02814 79 aaPredicted RBP1.12□□□□□ -2.23
SNX13-210ENST00000494402 SYNE1Q8NF91 8797 aaKnown RBP1.1□□□□□ -2.23
SNX13-210ENST00000494402 STATHP02808 62 aa1.09□□□□□ -2.23
SNX13-210ENST00000494402 SPRR2BP35325 72 aa1.09□□□□□ -2.23
SNX13-210ENST00000494402 DEFB110Q30KQ9 67 aa1.08□□□□□ -2.24
SNX13-210ENST00000494402 DNAH8Q96JB1 4490 aa1.07□□□□□ -2.24
SNX13-210ENST00000494402 SPRR2EP22531 72 aa1.06□□□□□ -2.24
SNX13-210ENST00000494402 SPRR2AP35326 72 aa1.06□□□□□ -2.24
SNX13-210ENST00000494402 CD52P31358 61 aa1.05□□□□□ -2.24
SNX13-210ENST00000494402 DEFB104AQ8WTQ1 72 aa1.04□□□□□ -2.24
SNX13-210ENST00000494402 MT4P47944 62 aa1□□□□□ -2.25
SNX13-210ENST00000494402 MT1HL1P0DM35 61 aa0.99□□□□□ -2.25
SNX13-210ENST00000494402 SPART-AS1P0CW21 52 aa0.97□□□□□ -2.25
SNX13-210ENST00000494402 TTTY10Q9BZA0 68 aa0.92□□□□□ -2.26
SNX13-210ENST00000494402 MT1HP80294 61 aa0.91□□□□□ -2.26
SNX13-210ENST00000494402 LINC01590Q5TEZ4 76 aa0.91□□□□□ -2.26
SNX13-210ENST00000494402 FLGP20930 4061 aaPredicted RBP0.9□□□□□ -2.27
SNX13-210ENST00000494402 PRCDQ00LT1 54 aa0.9□□□□□ -2.27
SNX13-210ENST00000494402 PHGR1C9JFL3 82 aa0.89□□□□□ -2.27
SNX13-210ENST00000494402 H3BSH0 61 aa0.89□□□□□ -2.27
SNX13-210ENST00000494402 MT1AP04731 61 aa0.88□□□□□ -2.27
SNX13-210ENST00000494402 KRTAP6-2Q3LI66 62 aa0.88□□□□□ -2.27
SNX13-210ENST00000494402 SPRR2FQ96RM1 72 aa0.88□□□□□ -2.27
SNX13-210ENST00000494402 DEFB133Q30KQ1 61 aa0.87□□□□□ -2.27
SNX13-210ENST00000494402 KRTAP8-1Q8IUC2 63 aa0.85□□□□□ -2.27
SNX13-210ENST00000494402 DEFB108AA8MXU0 73 aa0.84□□□□□ -2.27
SNX13-210ENST00000494402 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
SNX13-210ENST00000494402 RPL39P5Q59GN2 51 aa0.78□□□□□ -2.28
SNX13-210ENST00000494402 K7EIM0 57 aa0.77□□□□□ -2.29
SNX13-210ENST00000494402 TMEM167AQ8TBQ9 72 aa0.77□□□□□ -2.29
SNX13-210ENST00000494402 KRTAP19-2Q3LHN2 52 aa0.76□□□□□ -2.29
SNX13-210ENST00000494402 APELAP0DMC3 54 aa0.75□□□□□ -2.29
SNX13-210ENST00000494402 HTN1P15515 57 aa0.73□□□□□ -2.29
SNX13-210ENST00000494402 COX14Q96I36 57 aa0.72□□□□□ -2.29
SNX13-210ENST00000494402 KRTAP20-2Q3LI61 65 aa0.71□□□□□ -2.3
SNX13-210ENST00000494402 DEFB108BQ8NET1 73 aa0.71□□□□□ -2.3
SNX13-210ENST00000494402 RHPN1-AS1Q9BWJ2 59 aa0.7□□□□□ -2.3
SNX13-210ENST00000494402 H3BUX3 64 aa0.68□□□□□ -2.3
SNX13-210ENST00000494402 DEFB1P60022 68 aa0.67□□□□□ -2.3
SNX13-210ENST00000494402 A0A096LNI7 61 aa0.65□□□□□ -2.31
SNX13-210ENST00000494402 KRTAP19-5Q3LI72 72 aa0.65□□□□□ -2.31
SNX13-210ENST00000494402 MT2AP02795 61 aa0.64□□□□□ -2.31
SNX13-210ENST00000494402 DEFB136Q30KP8 78 aa0.64□□□□□ -2.31
SNX13-210ENST00000494402 A0A096LPF7 62 aa0.63□□□□□ -2.31
SNX13-210ENST00000494402 MT1FP04733 61 aa0.63□□□□□ -2.31
SNX13-210ENST00000494402 HTN3P15516 51 aa0.62□□□□□ -2.31
SNX13-210ENST00000494402 LINC01556Q5JQF7 62 aa0.59□□□□□ -2.31
SNX13-210ENST00000494402 DEFB4AO15263 64 aa0.55□□□□□ -2.32
SNX13-210ENST00000494402 RPS29P62273 56 aaKnown RBP0.53□□□□□ -2.32
SNX13-210ENST00000494402 MT1BP07438 61 aa0.4□□□□□ -2.35
SNX13-210ENST00000494402 SPRR2GQ9BYE4 73 aa0.34□□□□□ -2.36
SNX13-210ENST00000494402 MT1EP04732 61 aa0.3□□□□□ -2.36
SNX13-210ENST00000494402 MT1LQ93083 61 aa0.3□□□□□ -2.36
SNX13-210ENST00000494402 MT1XP80297 61 aa0.29□□□□□ -2.36
SNX13-210ENST00000494402 KRTAP19-8Q3LI54 63 aa0.28□□□□□ -2.36
SNX13-210ENST00000494402 MT1GP13640 62 aa0.27□□□□□ -2.37
SNX13-210ENST00000494402 KRTAP19-7Q3SYF9 63 aa0.23□□□□□ -2.37
SNX13-210ENST00000494402 MT1MQ8N339 61 aa0.23□□□□□ -2.37
SNX13-210ENST00000494402 KRTAP6-1Q3LI64 71 aa0.21□□□□□ -2.38
Retrieved 78 of 20,778 RNA–protein pairs in 9.8 ms