RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 ADIRFQ15847 76 aa1.1□□□□□ -2.23
GTF3A-208ENST00000493903 C18orf32Q8TCD1 76 aa1.1□□□□□ -2.23
GTF3A-208ENST00000493903 SPCS1Q9Y6A9 102 aa1.1□□□□□ -2.23
GTF3A-208ENST00000493903 SYS1-DBNDD2H3BUS1 97 aa1.09□□□□□ -2.23
GTF3A-208ENST00000493903 SMIM13P0DJ93 91 aa1.09□□□□□ -2.23
GTF3A-208ENST00000493903 LINC00158P58513 81 aa1.09□□□□□ -2.23
GTF3A-208ENST00000493903 H3BUT2 72 aa1.08□□□□□ -2.24
GTF3A-208ENST00000493903 PMCHL1Q16048 86 aa1.08□□□□□ -2.24
GTF3A-208ENST00000493903 SPATA8Q6RVD6 105 aa1.08□□□□□ -2.24
GTF3A-208ENST00000493903 LINC01549A6NIU2 74 aa1.07□□□□□ -2.24
GTF3A-208ENST00000493903 IGLV5-48A0A075B6I7 105 aa1.06□□□□□ -2.24
GTF3A-208ENST00000493903 MT1BP07438 61 aa1.06□□□□□ -2.24
GTF3A-208ENST00000493903 Q6JHZ5 121 aa1.06□□□□□ -2.24
GTF3A-208ENST00000493903 KRTAP2-1Q9BYU5 128 aa1.06□□□□□ -2.24
GTF3A-208ENST00000493903 ZNF815PA8K554 130 aa1.05□□□□□ -2.24
GTF3A-208ENST00000493903 MYMXA0A1B0GTQ4 84 aa1.04□□□□□ -2.24
GTF3A-208ENST00000493903 SPRR2EP22531 72 aa1.04□□□□□ -2.24
GTF3A-208ENST00000493903 COX7BP24311 80 aa1.04□□□□□ -2.24
GTF3A-208ENST00000493903 SPRR2BP35325 72 aa1.04□□□□□ -2.24
GTF3A-208ENST00000493903 SPRR2AP35326 72 aa1.04□□□□□ -2.24
GTF3A-208ENST00000493903 DEFB105AQ8NG35 78 aa1.04□□□□□ -2.24
GTF3A-208ENST00000493903 KRTAP19-8Q3LI54 63 aa1.03□□□□□ -2.24
GTF3A-208ENST00000493903 LINC00643Q86TS7 51 aa1.03□□□□□ -2.24
GTF3A-208ENST00000493903 LINC00308Q8TCZ7 52 aa1.02□□□□□ -2.25
GTF3A-208ENST00000493903 SPRR2FQ96RM1 72 aa1.02□□□□□ -2.25
GTF3A-208ENST00000493903 ACYP1P07311 99 aa1.01□□□□□ -2.25
GTF3A-208ENST00000493903 SPRR2DP22532 72 aa1.01□□□□□ -2.25
GTF3A-208ENST00000493903 F8WEM9 126 aa1□□□□□ -2.25
GTF3A-208ENST00000493903 PLNP26678 52 aa1□□□□□ -2.25
GTF3A-208ENST00000493903 SPRR2GQ9BYE4 73 aa1□□□□□ -2.25
GTF3A-208ENST00000493903 C3orf79P0CE67 100 aa0.99□□□□□ -2.25
GTF3A-208ENST00000493903 COX8AP10176 69 aa0.99□□□□□ -2.25
GTF3A-208ENST00000493903 AHNAKQ09666 5890 aaKnown RBP0.99□□□□□ -2.25
GTF3A-208ENST00000493903 KRTAP19-3Q7Z4W3 81 aa0.98□□□□□ -2.25
GTF3A-208ENST00000493903 WFDC13Q8IUB5 93 aa0.98□□□□□ -2.25
GTF3A-208ENST00000493903 A0A087WVE0 104 aa0.97□□□□□ -2.25
GTF3A-208ENST00000493903 H1FX-AS1Q4G0G2 97 aa0.97□□□□□ -2.25
GTF3A-208ENST00000493903 KRTAP8-1Q8IUC2 63 aa0.97□□□□□ -2.25
GTF3A-208ENST00000493903 LEPROTL1O95214 131 aa0.96□□□□□ -2.26
GTF3A-208ENST00000493903 MUC5BQ9HC84 5762 aaPredicted RBP0.95□□□□□ -2.26
GTF3A-208ENST00000493903 MT1XP80297 61 aa0.95□□□□□ -2.26
GTF3A-208ENST00000493903 KRTAP5-10Q6L8G5 202 aa0.95□□□□□ -2.26
GTF3A-208ENST00000493903 MUSTN1Q8IVN3 82 aa0.95□□□□□ -2.26
GTF3A-208ENST00000493903 TRBV7-4A0A0J9YYF1 115 aa0.93□□□□□ -2.26
GTF3A-208ENST00000493903 TP53AIP1Q9HCN2 124 aa0.93□□□□□ -2.26
GTF3A-208ENST00000493903 H0Y9P7 68 aa0.91□□□□□ -2.26
GTF3A-208ENST00000493903 MUC5ACP98088 5654 aa0.91□□□□□ -2.26
GTF3A-208ENST00000493903 CRIPTQ9P021 101 aa0.9□□□□□ -2.27
GTF3A-208ENST00000493903 S4R3F8 94 aa0.9□□□□□ -2.27
GTF3A-208ENST00000493903 MMP24-AS1A0A0U1RRL7 71 aa0.89□□□□□ -2.27
GTF3A-208ENST00000493903 H0YGX0 51 aa0.89□□□□□ -2.27
GTF3A-208ENST00000493903 MT4P47944 62 aa0.89□□□□□ -2.27
GTF3A-208ENST00000493903 ATXN8Q156A1 80 aa0.89□□□□□ -2.27
GTF3A-208ENST00000493903 ATP5EP2Q5VTU8 51 aa0.89□□□□□ -2.27
GTF3A-208ENST00000493903 MRPL34Q9BQ48 92 aaKnown RBP0.88□□□□□ -2.27
GTF3A-208ENST00000493903 NDUFB1O75438 58 aa0.87□□□□□ -2.27
GTF3A-208ENST00000493903 A0A1B0GU69 56 aa0.86□□□□□ -2.27
GTF3A-208ENST00000493903 H0YAA0 97 aa0.86□□□□□ -2.27
GTF3A-208ENST00000493903 K7EQZ3 153 aa0.86□□□□□ -2.27
GTF3A-208ENST00000493903 MT1EP04732 61 aa0.86□□□□□ -2.27
GTF3A-208ENST00000493903 NREPQ16612 68 aa0.86□□□□□ -2.27
GTF3A-208ENST00000493903 KRTAP19-7Q3SYF9 63 aa0.86□□□□□ -2.27
GTF3A-208ENST00000493903 SYNE1Q8NF91 8797 aaKnown RBP0.85□□□□□ -2.27
GTF3A-208ENST00000493903 KRTAP20-2Q3LI61 65 aa0.82□□□□□ -2.28
GTF3A-208ENST00000493903 MT1MQ8N339 61 aa0.82□□□□□ -2.28
GTF3A-208ENST00000493903 MT1GP13640 62 aa0.81□□□□□ -2.28
GTF3A-208ENST00000493903 M0QZ58 72 aa0.8□□□□□ -2.28
GTF3A-208ENST00000493903 KRTAP19-5Q3LI72 72 aa0.79□□□□□ -2.28
GTF3A-208ENST00000493903 MT1LQ93083 61 aa0.79□□□□□ -2.28
GTF3A-208ENST00000493903 UBL5Q9BZL1 73 aa0.78□□□□□ -2.28
GTF3A-208ENST00000493903 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
GTF3A-208ENST00000493903 MT1AP04731 61 aa0.67□□□□□ -2.3
GTF3A-208ENST00000493903 KRTAP6-1Q3LI64 71 aa0.67□□□□□ -2.3
GTF3A-208ENST00000493903 KRTAP6-2Q3LI66 62 aa0.66□□□□□ -2.3
GTF3A-208ENST00000493903 KRTAP21-1Q3LI58 79 aa0.64□□□□□ -2.31
GTF3A-208ENST00000493903 TNP1P09430 55 aa0.62□□□□□ -2.31
GTF3A-208ENST00000493903 PHGR1C9JFL3 82 aa0.54□□□□□ -2.32
GTF3A-208ENST00000493903 PRM1P04553 51 aa0.42□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 41.2 ms