RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 SYCP2Q9BX26 1530 aa-0.06□□□□□ -2.42
VPS26A-206ENST00000489794 FANCD2Q9BXW9 1451 aa-0.07□□□□□ -2.42
VPS26A-206ENST00000489794 CLPSL2Q6UWE3 100 aa-0.07□□□□□ -2.42
VPS26A-206ENST00000489794 A0A1B0GUL6 1792 aa-0.07□□□□□ -2.42
VPS26A-206ENST00000489794 KRTAP19-7Q3SYF9 63 aa-0.08□□□□□ -2.42
VPS26A-206ENST00000489794 NRXN3Q9Y4C0 1643 aa-0.09□□□□□ -2.42
VPS26A-206ENST00000489794 ABCC8Q09428 1581 aa-0.09□□□□□ -2.42
VPS26A-206ENST00000489794 KIF21BO75037 1637 aa-0.09□□□□□ -2.42
VPS26A-206ENST00000489794 TFF3Q07654 80 aa-0.1□□□□□ -2.43
VPS26A-206ENST00000489794 ABCA5Q8WWZ7 1642 aa-0.12□□□□□ -2.43
VPS26A-206ENST00000489794 SPART-AS1P0CW21 52 aa-0.12□□□□□ -2.43
VPS26A-206ENST00000489794 NDUFA1O15239 70 aa-0.14□□□□□ -2.43
VPS26A-206ENST00000489794 DEFB1P60022 68 aa-0.14□□□□□ -2.43
VPS26A-206ENST00000489794 KRTAP19-8Q3LI54 63 aa-0.14□□□□□ -2.43
VPS26A-206ENST00000489794 KRTAP8-1Q8IUC2 63 aa-0.14□□□□□ -2.43
VPS26A-206ENST00000489794 TOMM5Q8N4H5 51 aa-0.14□□□□□ -2.43
VPS26A-206ENST00000489794 TRPM2O94759 1503 aa-0.14□□□□□ -2.43
VPS26A-206ENST00000489794 LMO7Q8WWI1 1683 aa-0.15□□□□□ -2.43
VPS26A-206ENST00000489794 MT1HP80294 61 aa-0.16□□□□□ -2.44
VPS26A-206ENST00000489794 KRTAP19-2Q3LHN2 52 aa-0.16□□□□□ -2.44
VPS26A-206ENST00000489794 KRTAP19-5Q3LI72 72 aa-0.18□□□□□ -2.44
VPS26A-206ENST00000489794 SMR3BP02814 79 aaPredicted RBP-0.19□□□□□ -2.44
VPS26A-206ENST00000489794 POLR2KP53803 58 aaKnown RBP-0.19□□□□□ -2.44
VPS26A-206ENST00000489794 FAM208AQ9UK61 1670 aaKnown RBP-0.2□□□□□ -2.44
VPS26A-206ENST00000489794 DDX60Q8IY21 1712 aaKnown RBP-0.23□□□□□ -2.45
VPS26A-206ENST00000489794 MT1FP04733 61 aa-0.23□□□□□ -2.45
VPS26A-206ENST00000489794 MT1HL1P0DM35 61 aa-0.23□□□□□ -2.45
VPS26A-206ENST00000489794 MT2AP02795 61 aa-0.24□□□□□ -2.45
VPS26A-206ENST00000489794 MT1BP07438 61 aa-0.25□□□□□ -2.45
VPS26A-206ENST00000489794 MT1EP04732 61 aa-0.26□□□□□ -2.45
VPS26A-206ENST00000489794 NFAT5O94916 1531 aa-0.27□□□□□ -2.45
VPS26A-206ENST00000489794 IQGAP1P46940 1657 aa-0.27□□□□□ -2.45
VPS26A-206ENST00000489794 IQGAP2Q13576 1575 aa-0.28□□□□□ -2.45
VPS26A-206ENST00000489794 CLTCL1P53675 1640 aa-0.28□□□□□ -2.45
VPS26A-206ENST00000489794 MT1MQ8N339 61 aa-0.29□□□□□ -2.46
VPS26A-206ENST00000489794 MT1XP80297 61 aa-0.3□□□□□ -2.46
VPS26A-206ENST00000489794 MT1LQ93083 61 aa-0.3□□□□□ -2.46
VPS26A-206ENST00000489794 LEAP2Q969E1 77 aa-0.3□□□□□ -2.46
VPS26A-206ENST00000489794 TOMM7Q9P0U1 55 aa-0.32□□□□□ -2.46
VPS26A-206ENST00000489794 SAMD9LQ8IVG5 1584 aa-0.32□□□□□ -2.46
VPS26A-206ENST00000489794 DEFB136Q30KP8 78 aa-0.33□□□□□ -2.46
VPS26A-206ENST00000489794 ATP7AQ04656 1500 aa-0.33□□□□□ -2.46
VPS26A-206ENST00000489794 MT1GP13640 62 aa-0.34□□□□□ -2.46
VPS26A-206ENST00000489794 LINC01590Q5TEZ4 76 aa-0.34□□□□□ -2.46
VPS26A-206ENST00000489794 RPL39P62891 51 aaKnown RBP-0.37□□□□□ -2.47
VPS26A-206ENST00000489794 TOP2AP11388 1531 aaKnown RBP-0.39□□□□□ -2.47
VPS26A-206ENST00000489794 DEFB104AQ8WTQ1 72 aa-0.4□□□□□ -2.47
VPS26A-206ENST00000489794 DEFB124Q8NES8 71 aa-0.41□□□□□ -2.48
VPS26A-206ENST00000489794 RHPN1-AS1Q9BWJ2 59 aa-0.42□□□□□ -2.48
VPS26A-206ENST00000489794 MROH2BQ7Z745 1585 aa-0.42□□□□□ -2.48
VPS26A-206ENST00000489794 DUOX1Q9NRD9 1551 aa-0.43□□□□□ -2.48
VPS26A-206ENST00000489794 SNRPGP62308 76 aaKnown RBP-0.43□□□□□ -2.48
VPS26A-206ENST00000489794 RPL39LQ96EH5 51 aaKnown RBP-0.43□□□□□ -2.48
VPS26A-206ENST00000489794 DEFB4AO15263 64 aa-0.44□□□□□ -2.48
VPS26A-206ENST00000489794 RPS29P62273 56 aaKnown RBP-0.51□□□□□ -2.49
VPS26A-206ENST00000489794 DEFB133Q30KQ1 61 aa-0.54□□□□□ -2.5
VPS26A-206ENST00000489794 A0A096LNI7 61 aa-0.57□□□□□ -2.5
VPS26A-206ENST00000489794 H3BUX3 64 aa-0.57□□□□□ -2.5
VPS26A-206ENST00000489794 K7EIM0 57 aa-0.57□□□□□ -2.5
VPS26A-206ENST00000489794 STATHP02808 62 aa-0.57□□□□□ -2.5
VPS26A-206ENST00000489794 CD52P31358 61 aa-0.57□□□□□ -2.5
VPS26A-206ENST00000489794 HTN1P15515 57 aa-0.58□□□□□ -2.5
VPS26A-206ENST00000489794 ARHGAP5-AS1Q96IT6 56 aa-0.61□□□□□ -2.51
VPS26A-206ENST00000489794 PRCDQ00LT1 54 aa-0.63□□□□□ -2.51
VPS26A-206ENST00000489794 TTTY10Q9BZA0 68 aa-0.63□□□□□ -2.51
VPS26A-206ENST00000489794 DEFB108AA8MXU0 73 aa-0.64□□□□□ -2.51
VPS26A-206ENST00000489794 GCC2Q8IWJ2 1684 aa-0.65□□□□□ -2.51
VPS26A-206ENST00000489794 H3BSH0 61 aa-0.7□□□□□ -2.52
VPS26A-206ENST00000489794 DEFB108BQ8NET1 73 aa-0.71□□□□□ -2.52
VPS26A-206ENST00000489794 TMEM167AQ8TBQ9 72 aa-0.74□□□□□ -2.53
VPS26A-206ENST00000489794 LINC01556Q5JQF7 62 aa-0.77□□□□□ -2.53
VPS26A-206ENST00000489794 HTN3P15516 51 aa-0.78□□□□□ -2.53
VPS26A-206ENST00000489794 A0A096LPF7 62 aa-0.8□□□□□ -2.54
VPS26A-206ENST00000489794 APELAP0DMC3 54 aa-0.82□□□□□ -2.54
VPS26A-206ENST00000489794 Q9Y3F1 56 aa-0.84□□□□□ -2.54
VPS26A-206ENST00000489794 RPL39P5Q59GN2 51 aa-0.85□□□□□ -2.55
VPS26A-206ENST00000489794 COX14Q96I36 57 aa-0.89□□□□□ -2.55
Retrieved 77 of 20,778 RNA–protein pairs in 12.2 ms