RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 DSTQ03001 7570 aaKnown RBP2.52□□□□□ -2.01
SF1-217ENST00000486960 WFDC13Q8IUB5 93 aa2.51□□□□□ -2.01
SF1-217ENST00000486960 M0R2T5 61 aa2.5□□□□□ -2.01
SF1-217ENST00000486960 SPINK1P00995 79 aa2.5□□□□□ -2.01
SF1-217ENST00000486960 KRTAP5-10Q6L8G5 202 aa2.5□□□□□ -2.01
SF1-217ENST00000486960 H0YAA0 97 aa2.49□□□□□ -2.01
SF1-217ENST00000486960 KRTAP13-3Q3SY46 172 aa2.49□□□□□ -2.01
SF1-217ENST00000486960 PCOTHQ58A44 107 aa2.49□□□□□ -2.01
SF1-217ENST00000486960 SPRR5A0A1B0GTR4 108 aa2.48□□□□□ -2.01
SF1-217ENST00000486960 RPS29P62273 56 aaKnown RBP2.48□□□□□ -2.01
SF1-217ENST00000486960 LCE1FQ5T754 118 aa2.48□□□□□ -2.01
SF1-217ENST00000486960 KRTAP5-7Q6L8G8 165 aa2.47□□□□□ -2.01
SF1-217ENST00000486960 C9orf92A6NGG3 77 aa2.43□□□□□ -2.02
SF1-217ENST00000486960 C10orf95Q9H7T3 257 aa2.41□□□□□ -2.02
SF1-217ENST00000486960 AHNAKQ09666 5890 aaKnown RBP2.41□□□□□ -2.02
SF1-217ENST00000486960 MT2AP02795 61 aa2.39□□□□□ -2.03
SF1-217ENST00000486960 MT1FP04733 61 aa2.39□□□□□ -2.03
SF1-217ENST00000486960 SPRR2EP22531 72 aa2.39□□□□□ -2.03
SF1-217ENST00000486960 SPRR2BP35325 72 aa2.39□□□□□ -2.03
SF1-217ENST00000486960 SPRR2AP35326 72 aa2.39□□□□□ -2.03
SF1-217ENST00000486960 H1FX-AS1Q4G0G2 97 aa2.39□□□□□ -2.03
SF1-217ENST00000486960 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.37□□□□□ -2.03
SF1-217ENST00000486960 KRTAP10-7P60409 375 aaPredicted RBP2.36□□□□□ -2.03
SF1-217ENST00000486960 MUC5BQ9HC84 5762 aaPredicted RBP2.33□□□□□ -2.04
SF1-217ENST00000486960 SPRR2DP22532 72 aa2.31□□□□□ -2.04
SF1-217ENST00000486960 KRTAP12-1P59990 96 aa2.31□□□□□ -2.04
SF1-217ENST00000486960 LCE3CQ5T5A8 94 aa2.28□□□□□ -2.04
SF1-217ENST00000486960 KRTAP10-12P60413 245 aa2.27□□□□□ -2.05
SF1-217ENST00000486960 KRTAP5-11Q6L8G4 156 aa2.26□□□□□ -2.05
SF1-217ENST00000486960 SPRR2FQ96RM1 72 aa2.26□□□□□ -2.05
SF1-217ENST00000486960 LCE1EQ5T753 118 aa2.25□□□□□ -2.05
SF1-217ENST00000486960 KRTAP10-10P60014 251 aa2.24□□□□□ -2.05
SF1-217ENST00000486960 MUC5ACP98088 5654 aa2.24□□□□□ -2.05
SF1-217ENST00000486960 S4R3F8 94 aa2.16□□□□□ -2.06
SF1-217ENST00000486960 KRTAP12-4P60329 112 aa2.14□□□□□ -2.07
SF1-217ENST00000486960 MT4P47944 62 aa2.13□□□□□ -2.07
SF1-217ENST00000486960 KRTAP10-5P60370 271 aa2.13□□□□□ -2.07
SF1-217ENST00000486960 A0A0D9SG42 100 aa2.1□□□□□ -2.07
SF1-217ENST00000486960 LCE3EQ5T5B0 92 aa2.08□□□□□ -2.08
SF1-217ENST00000486960 KRTAP5-1Q6L8H4 278 aa2.05□□□□□ -2.08
SF1-217ENST00000486960 MT1BP07438 61 aa2.01□□□□□ -2.09
SF1-217ENST00000486960 KRTAP9-6A8MVA2 160 aa2□□□□□ -2.09
SF1-217ENST00000486960 M0QZ58 72 aa2□□□□□ -2.09
SF1-217ENST00000486960 KRTAP4-4Q9BYR3 166 aa2□□□□□ -2.09
SF1-217ENST00000486960 KRTAP5-4Q6L8H1 288 aa1.99□□□□□ -2.09
SF1-217ENST00000486960 SPRR2GQ9BYE4 73 aa1.98□□□□□ -2.09
SF1-217ENST00000486960 KRTAP8-1Q8IUC2 63 aa1.97□□□□□ -2.09
SF1-217ENST00000486960 KRTAP19-8Q3LI54 63 aa1.95□□□□□ -2.1
SF1-217ENST00000486960 LCE3DQ9BYE3 92 aa1.94□□□□□ -2.1
SF1-217ENST00000486960 KRTAP5-8O75690 187 aa1.9□□□□□ -2.11
SF1-217ENST00000486960 MT1XP80297 61 aa1.87□□□□□ -2.11
SF1-217ENST00000486960 KRTAP12-3P60328 96 aa1.84□□□□□ -2.11
SF1-217ENST00000486960 KRTAP20-2Q3LI61 65 aa1.82□□□□□ -2.12
SF1-217ENST00000486960 SYNE1Q8NF91 8797 aaKnown RBP1.81□□□□□ -2.12
SF1-217ENST00000486960 OBSCNQ5VST9 7968 aa1.76□□□□□ -2.13
SF1-217ENST00000486960 KRTAP5-2Q701N4 177 aa1.76□□□□□ -2.13
SF1-217ENST00000486960 LCE3AQ5TA76 89 aa1.75□□□□□ -2.13
SF1-217ENST00000486960 TNP1P09430 55 aa1.74□□□□□ -2.13
SF1-217ENST00000486960 KRTAP4-3Q9BYR4 195 aa1.72□□□□□ -2.13
SF1-217ENST00000486960 KRTAP19-5Q3LI72 72 aa1.67□□□□□ -2.14
SF1-217ENST00000486960 KRTAP19-7Q3SYF9 63 aa1.67□□□□□ -2.14
SF1-217ENST00000486960 MT1EP04732 61 aa1.63□□□□□ -2.15
SF1-217ENST00000486960 KRTAP19-3Q7Z4W3 81 aa1.62□□□□□ -2.15
SF1-217ENST00000486960 MT1LQ93083 61 aa1.59□□□□□ -2.15
SF1-217ENST00000486960 MT1MQ8N339 61 aa1.54□□□□□ -2.16
SF1-217ENST00000486960 MT1GP13640 62 aa1.53□□□□□ -2.16
SF1-217ENST00000486960 KRTAP5-5Q701N2 237 aaPredicted RBP1.51□□□□□ -2.17
SF1-217ENST00000486960 LCE1CQ5T751 118 aa1.49□□□□□ -2.17
SF1-217ENST00000486960 LCE1BQ5T7P3 118 aa1.49□□□□□ -2.17
SF1-217ENST00000486960 PHGR1C9JFL3 82 aa1.45□□□□□ -2.18
SF1-217ENST00000486960 PRM1P04553 51 aa1.44□□□□□ -2.18
SF1-217ENST00000486960 KRTAP6-1Q3LI64 71 aa1.35□□□□□ -2.19
SF1-217ENST00000486960 MT1AP04731 61 aa1.34□□□□□ -2.19
SF1-217ENST00000486960 KRTAP6-2Q3LI66 62 aa1.26□□□□□ -2.21
SF1-217ENST00000486960 MUC19Q7Z5P9 8384 aa1.16□□□□□ -2.22
SF1-217ENST00000486960 KRTAP21-1Q3LI58 79 aa1.11□□□□□ -2.23
SF1-217ENST00000486960 KRTAP21-2Q3LI59 83 aa1.03□□□□□ -2.24
SF1-217ENST00000486960 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 94.2 ms