RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 FAT1Q14517 4588 aa0.05□□□□□ -2.4
VPS13A-211ENST00000484581 DNAH10Q8IVF4 4471 aa0.05□□□□□ -2.4
VPS13A-211ENST00000484581 DNAH5Q8TE73 4624 aa0.05□□□□□ -2.4
VPS13A-211ENST00000484581 CLTCL1P53675 1640 aa0.05□□□□□ -2.4
VPS13A-211ENST00000484581 CMYA5Q8N3K9 4069 aa0.05□□□□□ -2.4
VPS13A-211ENST00000484581 PKHD1L1Q86WI1 4243 aa0.04□□□□□ -2.4
VPS13A-211ENST00000484581 MT1AP04731 61 aa0.04□□□□□ -2.4
VPS13A-211ENST00000484581 KRTAP20-2Q3LI61 65 aa0.04□□□□□ -2.4
VPS13A-211ENST00000484581 KRTAP6-1Q3LI64 71 aa0.04□□□□□ -2.4
VPS13A-211ENST00000484581 ANK3Q12955 4377 aaKnown RBP0.03□□□□□ -2.4
VPS13A-211ENST00000484581 DEFB104AQ8WTQ1 72 aa0.03□□□□□ -2.4
VPS13A-211ENST00000484581 TOMM7Q9P0U1 55 aa0.03□□□□□ -2.4
VPS13A-211ENST00000484581 DYNC2H1Q8NCM8 4307 aaKnown RBP0.03□□□□□ -2.41
VPS13A-211ENST00000484581 TOP2AP11388 1531 aaKnown RBP0.03□□□□□ -2.41
VPS13A-211ENST00000484581 DEFB1P60022 68 aa0.02□□□□□ -2.41
VPS13A-211ENST00000484581 KRTAP19-7Q3SYF9 63 aa0.02□□□□□ -2.41
VPS13A-211ENST00000484581 KRTAP8-1Q8IUC2 63 aa0.02□□□□□ -2.41
VPS13A-211ENST00000484581 DNAH3Q8TD57 4116 aa0.02□□□□□ -2.41
VPS13A-211ENST00000484581 ATP7AQ04656 1500 aa0.02□□□□□ -2.41
VPS13A-211ENST00000484581 MROH2BQ7Z745 1585 aa0.02□□□□□ -2.41
VPS13A-211ENST00000484581 PKD1P98161 4303 aa0.01□□□□□ -2.41
VPS13A-211ENST00000484581 VPS13BQ7Z7G8 4022 aa0.01□□□□□ -2.41
VPS13A-211ENST00000484581 RPL39P62891 51 aaKnown RBP0.01□□□□□ -2.41
VPS13A-211ENST00000484581 DNAH6Q9C0G6 4158 aa0.01□□□□□ -2.41
VPS13A-211ENST00000484581 MUC17Q685J3 4493 aa0.01□□□□□ -2.41
VPS13A-211ENST00000484581 DEFB124Q8NES8 71 aa0□□□□□ -2.41
VPS13A-211ENST00000484581 SAMD9LQ8IVG5 1584 aa-0.01□□□□□ -2.41
VPS13A-211ENST00000484581 DNAH11Q96DT5 4516 aa-0.01□□□□□ -2.41
VPS13A-211ENST00000484581 KRTAP19-8Q3LI54 63 aa-0.01□□□□□ -2.41
VPS13A-211ENST00000484581 MT1HP80294 61 aa-0.02□□□□□ -2.41
VPS13A-211ENST00000484581 LEAP2Q969E1 77 aa-0.02□□□□□ -2.41
VPS13A-211ENST00000484581 RPL39LQ96EH5 51 aaKnown RBP-0.02□□□□□ -2.41
VPS13A-211ENST00000484581 DNAH17Q9UFH2 4485 aa-0.02□□□□□ -2.41
VPS13A-211ENST00000484581 FLGP20930 4061 aaPredicted RBP-0.03□□□□□ -2.41
VPS13A-211ENST00000484581 VPS13DQ5THJ4 4388 aa-0.03□□□□□ -2.41
VPS13A-211ENST00000484581 DNAH8Q96JB1 4490 aa-0.04□□□□□ -2.42
VPS13A-211ENST00000484581 DUOX1Q9NRD9 1551 aa-0.05□□□□□ -2.42
VPS13A-211ENST00000484581 KRTAP19-5Q3LI72 72 aa-0.05□□□□□ -2.42
VPS13A-211ENST00000484581 SNRPGP62308 76 aaKnown RBP-0.06□□□□□ -2.42
VPS13A-211ENST00000484581 DNAH2Q9P225 4427 aa-0.06□□□□□ -2.42
VPS13A-211ENST00000484581 MT1BP07438 61 aa-0.07□□□□□ -2.42
VPS13A-211ENST00000484581 MT1HL1P0DM35 61 aa-0.09□□□□□ -2.42
VPS13A-211ENST00000484581 MT2AP02795 61 aa-0.1□□□□□ -2.43
VPS13A-211ENST00000484581 MT1FP04733 61 aa-0.1□□□□□ -2.43
VPS13A-211ENST00000484581 LINC01590Q5TEZ4 76 aa-0.11□□□□□ -2.43
VPS13A-211ENST00000484581 TTTY10Q9BZA0 68 aa-0.11□□□□□ -2.43
VPS13A-211ENST00000484581 RPS29P62273 56 aaKnown RBP-0.12□□□□□ -2.43
VPS13A-211ENST00000484581 KRTAP19-2Q3LHN2 52 aa-0.12□□□□□ -2.43
VPS13A-211ENST00000484581 MT1MQ8N339 61 aa-0.13□□□□□ -2.43
VPS13A-211ENST00000484581 A0A096LNI7 61 aa-0.15□□□□□ -2.43
VPS13A-211ENST00000484581 DEFB4AO15263 64 aa-0.15□□□□□ -2.43
VPS13A-211ENST00000484581 STATHP02808 62 aa-0.15□□□□□ -2.43
VPS13A-211ENST00000484581 MT1EP04732 61 aa-0.15□□□□□ -2.43
VPS13A-211ENST00000484581 MT1GP13640 62 aa-0.15□□□□□ -2.43
VPS13A-211ENST00000484581 DEFB136Q30KP8 78 aa-0.15□□□□□ -2.43
VPS13A-211ENST00000484581 MT1LQ93083 61 aa-0.16□□□□□ -2.44
VPS13A-211ENST00000484581 RHPN1-AS1Q9BWJ2 59 aa-0.16□□□□□ -2.44
VPS13A-211ENST00000484581 MT1XP80297 61 aa-0.17□□□□□ -2.44
VPS13A-211ENST00000484581 ARHGAP5-AS1Q96IT6 56 aa-0.17□□□□□ -2.44
VPS13A-211ENST00000484581 HTN1P15515 57 aa-0.18□□□□□ -2.44
VPS13A-211ENST00000484581 GCC2Q8IWJ2 1684 aa-0.21□□□□□ -2.44
VPS13A-211ENST00000484581 H3BSH0 61 aa-0.22□□□□□ -2.44
VPS13A-211ENST00000484581 CD52P31358 61 aa-0.23□□□□□ -2.45
VPS13A-211ENST00000484581 PRCDQ00LT1 54 aa-0.24□□□□□ -2.45
VPS13A-211ENST00000484581 DEFB133Q30KQ1 61 aa-0.24□□□□□ -2.45
VPS13A-211ENST00000484581 HTN3P15516 51 aa-0.25□□□□□ -2.45
VPS13A-211ENST00000484581 DEFB108AA8MXU0 73 aa-0.28□□□□□ -2.45
VPS13A-211ENST00000484581 K7EIM0 57 aa-0.28□□□□□ -2.45
VPS13A-211ENST00000484581 LINC01556Q5JQF7 62 aa-0.3□□□□□ -2.46
VPS13A-211ENST00000484581 H3BUX3 64 aa-0.31□□□□□ -2.46
VPS13A-211ENST00000484581 DEFB108BQ8NET1 73 aa-0.32□□□□□ -2.46
VPS13A-211ENST00000484581 APELAP0DMC3 54 aa-0.34□□□□□ -2.46
VPS13A-211ENST00000484581 TMEM167AQ8TBQ9 72 aa-0.34□□□□□ -2.46
VPS13A-211ENST00000484581 COX14Q96I36 57 aa-0.34□□□□□ -2.46
VPS13A-211ENST00000484581 A0A096LPF7 62 aa-0.36□□□□□ -2.47
VPS13A-211ENST00000484581 RPL39P5Q59GN2 51 aa-0.36□□□□□ -2.47
VPS13A-211ENST00000484581 Q9Y3F1 56 aa-0.37□□□□□ -2.47
Retrieved 77 of 20,778 RNA–protein pairs in 12 ms