RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 C20orf197Q8N268 126 aa1.52□□□□□ -2.17
LRCH3-217ENST00000483442 ZCCHC13Q8WW36 166 aaKnown RBP1.52□□□□□ -2.17
LRCH3-217ENST00000483442 JMJD7-PLA2G4BH0Y9G9 81 aa1.51□□□□□ -2.17
LRCH3-217ENST00000483442 LINC00575Q6W349 94 aa1.51□□□□□ -2.17
LRCH3-217ENST00000483442 SMIM11BQ8TCY0 68 aa1.51□□□□□ -2.17
LRCH3-217ENST00000483442 SPRR2GQ9BYE4 73 aa1.51□□□□□ -2.17
LRCH3-217ENST00000483442 ACYP1P07311 99 aa1.5□□□□□ -2.17
LRCH3-217ENST00000483442 PLNP26678 52 aa1.5□□□□□ -2.17
LRCH3-217ENST00000483442 LINC00643Q86TS7 51 aa1.5□□□□□ -2.17
LRCH3-217ENST00000483442 LOC101927531A0A1B0GV80 90 aa1.49□□□□□ -2.17
LRCH3-217ENST00000483442 KLKP1Q107X0 134 aa1.49□□□□□ -2.17
LRCH3-217ENST00000483442 LEPROTL1O95214 131 aa1.48□□□□□ -2.17
LRCH3-217ENST00000483442 C3orf79P0CE67 100 aa1.48□□□□□ -2.17
LRCH3-217ENST00000483442 MUSTN1Q8IVN3 82 aa1.48□□□□□ -2.17
LRCH3-217ENST00000483442 PRR15LQ9BU68 103 aa1.47□□□□□ -2.17
LRCH3-217ENST00000483442 DSTQ03001 7570 aaKnown RBP1.47□□□□□ -2.17
LRCH3-217ENST00000483442 PDE6GP18545 87 aa1.46□□□□□ -2.18
LRCH3-217ENST00000483442 LINC00472Q9H8W2 130 aa1.46□□□□□ -2.18
LRCH3-217ENST00000483442 IGKV3D-7A0A0C4DH55 119 aa1.45□□□□□ -2.18
LRCH3-217ENST00000483442 KRTAP5-10Q6L8G5 202 aa1.45□□□□□ -2.18
LRCH3-217ENST00000483442 COA5Q86WW8 74 aa1.45□□□□□ -2.18
LRCH3-217ENST00000483442 MT4P47944 62 aa1.44□□□□□ -2.18
LRCH3-217ENST00000483442 MT1XP80297 61 aa1.44□□□□□ -2.18
LRCH3-217ENST00000483442 A0A087WVE0 104 aa1.43□□□□□ -2.18
LRCH3-217ENST00000483442 TRBV7-4A0A0J9YYF1 115 aa1.43□□□□□ -2.18
LRCH3-217ENST00000483442 LINC00208Q96KT6 92 aa1.42□□□□□ -2.18
LRCH3-217ENST00000483442 COX8AP10176 69 aa1.41□□□□□ -2.18
LRCH3-217ENST00000483442 SNURFQ9Y675 71 aa1.41□□□□□ -2.18
LRCH3-217ENST00000483442 LINC01558Q9Y6Z2 57 aa1.41□□□□□ -2.18
LRCH3-217ENST00000483442 S4R3F8 94 aa1.41□□□□□ -2.18
LRCH3-217ENST00000483442 UQCR11O14957 56 aa1.4□□□□□ -2.19
LRCH3-217ENST00000483442 NDUFB1O75438 58 aa1.4□□□□□ -2.19
LRCH3-217ENST00000483442 PLAC4Q8WY50 150 aa1.4□□□□□ -2.19
LRCH3-217ENST00000483442 CRIPTQ9P021 101 aa1.4□□□□□ -2.19
LRCH3-217ENST00000483442 AHNAK2Q8IVF2 5795 aa1.39□□□□□ -2.19
LRCH3-217ENST00000483442 H0YGX0 51 aa1.39□□□□□ -2.19
LRCH3-217ENST00000483442 INE1O15225 51 aa1.39□□□□□ -2.19
LRCH3-217ENST00000483442 ACYP2P14621 99 aa1.39□□□□□ -2.19
LRCH3-217ENST00000483442 LOC110117498A0A087WWA1 95 aa1.37□□□□□ -2.19
LRCH3-217ENST00000483442 ATP5EP2Q5VTU8 51 aa1.37□□□□□ -2.19
LRCH3-217ENST00000483442 ATXN8Q156A1 80 aa1.36□□□□□ -2.19
LRCH3-217ENST00000483442 MRPL34Q9BQ48 92 aaKnown RBP1.36□□□□□ -2.19
LRCH3-217ENST00000483442 H0Y9P7 68 aa1.35□□□□□ -2.19
LRCH3-217ENST00000483442 K7EQZ3 153 aa1.35□□□□□ -2.19
LRCH3-217ENST00000483442 MMP24-AS1A0A0U1RRL7 71 aa1.33□□□□□ -2.2
LRCH3-217ENST00000483442 KRTAP19-3Q7Z4W3 81 aa1.32□□□□□ -2.2
LRCH3-217ENST00000483442 H0YAA0 97 aa1.31□□□□□ -2.2
LRCH3-217ENST00000483442 KRTAP12-4P60329 112 aa1.31□□□□□ -2.2
LRCH3-217ENST00000483442 NREPQ16612 68 aa1.31□□□□□ -2.2
LRCH3-217ENST00000483442 SPATA8Q6RVD6 105 aa1.31□□□□□ -2.2
LRCH3-217ENST00000483442 A0A1B0GU69 56 aa1.3□□□□□ -2.2
LRCH3-217ENST00000483442 MT1EP04732 61 aa1.28□□□□□ -2.2
LRCH3-217ENST00000483442 MT1GP13640 62 aa1.28□□□□□ -2.2
LRCH3-217ENST00000483442 KRTAP19-7Q3SYF9 63 aa1.28□□□□□ -2.2
LRCH3-217ENST00000483442 M0QZ58 72 aa1.27□□□□□ -2.21
LRCH3-217ENST00000483442 KRTAP13-4Q3LI77 160 aa1.27□□□□□ -2.21
LRCH3-217ENST00000483442 KRTAP20-2Q3LI61 65 aa1.26□□□□□ -2.21
LRCH3-217ENST00000483442 KRTAP12-3P60328 96 aa1.25□□□□□ -2.21
LRCH3-217ENST00000483442 MT1MQ8N339 61 aa1.24□□□□□ -2.21
LRCH3-217ENST00000483442 UBL5Q9BZL1 73 aa1.24□□□□□ -2.21
LRCH3-217ENST00000483442 KRTAP12-1P59990 96 aa1.22□□□□□ -2.21
LRCH3-217ENST00000483442 KRTAP19-5Q3LI72 72 aa1.22□□□□□ -2.21
LRCH3-217ENST00000483442 AHNAKQ09666 5890 aaKnown RBP1.21□□□□□ -2.22
LRCH3-217ENST00000483442 MUC5ACP98088 5654 aa1.2□□□□□ -2.22
LRCH3-217ENST00000483442 MT1LQ93083 61 aa1.19□□□□□ -2.22
LRCH3-217ENST00000483442 TP53AIP1Q9HCN2 124 aa1.18□□□□□ -2.22
LRCH3-217ENST00000483442 MUC5BQ9HC84 5762 aaPredicted RBP1.17□□□□□ -2.22
LRCH3-217ENST00000483442 A0A0D9SG42 100 aa1.17□□□□□ -2.22
LRCH3-217ENST00000483442 SYNE1Q8NF91 8797 aaKnown RBP1.16□□□□□ -2.22
LRCH3-217ENST00000483442 C10orf95Q9H7T3 257 aa1.1□□□□□ -2.23
LRCH3-217ENST00000483442 KRTAP6-1Q3LI64 71 aa1.04□□□□□ -2.24
LRCH3-217ENST00000483442 KRTAP6-2Q3LI66 62 aa1.04□□□□□ -2.24
LRCH3-217ENST00000483442 MT1AP04731 61 aa1□□□□□ -2.25
LRCH3-217ENST00000483442 TNP1P09430 55 aa0.99□□□□□ -2.25
LRCH3-217ENST00000483442 PHGR1C9JFL3 82 aa0.87□□□□□ -2.27
LRCH3-217ENST00000483442 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
LRCH3-217ENST00000483442 KRTAP21-1Q3LI58 79 aa0.65□□□□□ -2.31
LRCH3-217ENST00000483442 PRM1P04553 51 aa0.64□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 43.5 ms