RNA–Protein interactions for RNA: ENST00000478736.1

PDE1C-208, Transcript of phosphodiesterase 1C, humanhuman

TSL 3

Gene PDE1C, Length 495 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-208ENST00000478736 RPS27P42677 84 aaKnown RBP-0.44□□□□□ -2.48
PDE1C-208ENST00000478736 WT1-ASQ06250 92 aa-0.44□□□□□ -2.48
PDE1C-208ENST00000478736 ATXN8Q156A1 80 aa-0.44□□□□□ -2.48
PDE1C-208ENST00000478736 DEFB110Q30KQ9 67 aa-0.44□□□□□ -2.48
PDE1C-208ENST00000478736 MINOS1Q5TGZ0 78 aa-0.44□□□□□ -2.48
PDE1C-208ENST00000478736 RPS27LQ71UM5 84 aaKnown RBP-0.44□□□□□ -2.48
PDE1C-208ENST00000478736 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.45□□□□□ -2.48
PDE1C-208ENST00000478736 HILPDAQ9Y5L2 63 aa-0.45□□□□□ -2.48
PDE1C-208ENST00000478736 CLPSL2Q6UWE3 100 aa-0.46□□□□□ -2.48
PDE1C-208ENST00000478736 ABCC8Q09428 1581 aa-0.47□□□□□ -2.48
PDE1C-208ENST00000478736 GNG13Q9P2W3 67 aa-0.47□□□□□ -2.48
PDE1C-208ENST00000478736 C6orf48Q9UBA6 75 aa-0.47□□□□□ -2.48
PDE1C-208ENST00000478736 FANCD2Q9BXW9 1451 aa-0.48□□□□□ -2.49
PDE1C-208ENST00000478736 SPART-AS1P0CW21 52 aa-0.48□□□□□ -2.49
PDE1C-208ENST00000478736 HTN3P15516 51 aa-0.48□□□□□ -2.49
PDE1C-208ENST00000478736 NCBP2-AS2Q69YL0 99 aa-0.48□□□□□ -2.49
PDE1C-208ENST00000478736 DEFB108BQ8NET1 73 aa-0.48□□□□□ -2.49
PDE1C-208ENST00000478736 COX14Q96I36 57 aa-0.48□□□□□ -2.49
PDE1C-208ENST00000478736 SMCO4Q9NRQ5 59 aa-0.48□□□□□ -2.49
PDE1C-208ENST00000478736 IQGAP2Q13576 1575 aa-0.49□□□□□ -2.49
PDE1C-208ENST00000478736 IGLV5-48A0A075B6I7 105 aa-0.49□□□□□ -2.49
PDE1C-208ENST00000478736 A8MTW9 85 aa-0.49□□□□□ -2.49
PDE1C-208ENST00000478736 FCER1GP30273 86 aa-0.49□□□□□ -2.49
PDE1C-208ENST00000478736 DEFB133Q30KQ1 61 aa-0.49□□□□□ -2.49
PDE1C-208ENST00000478736 LINC01556Q5JQF7 62 aa-0.49□□□□□ -2.49
PDE1C-208ENST00000478736 H3BUA1 57 aa-0.5□□□□□ -2.49
PDE1C-208ENST00000478736 PDCD5O14737 125 aa-0.5□□□□□ -2.49
PDE1C-208ENST00000478736 Q9Y3F1 56 aa-0.5□□□□□ -2.49
PDE1C-208ENST00000478736 LINC01546A6NGU7 62 aa-0.51□□□□□ -2.49
PDE1C-208ENST00000478736 H3BUX3 64 aa-0.51□□□□□ -2.49
PDE1C-208ENST00000478736 SFTA3P0C7M3 94 aa-0.51□□□□□ -2.49
PDE1C-208ENST00000478736 TOP2AP11388 1531 aaKnown RBP-0.51□□□□□ -2.49
PDE1C-208ENST00000478736 MMP24-AS1A0A0U1RRL7 71 aa-0.52□□□□□ -2.49
PDE1C-208ENST00000478736 LEAP2Q969E1 77 aa-0.52□□□□□ -2.49
PDE1C-208ENST00000478736 LINC01549A6NIU2 74 aa-0.53□□□□□ -2.49
PDE1C-208ENST00000478736 TNP1P09430 55 aa-0.53□□□□□ -2.49
PDE1C-208ENST00000478736 HTN1P15515 57 aa-0.53□□□□□ -2.49
PDE1C-208ENST00000478736 NOP10Q9NPE3 64 aaKnown RBP-0.53□□□□□ -2.49
PDE1C-208ENST00000478736 M0QZ58 72 aa-0.54□□□□□ -2.5
PDE1C-208ENST00000478736 A0A096LPF7 62 aa-0.55□□□□□ -2.5
PDE1C-208ENST00000478736 K7EMI3 77 aa-0.55□□□□□ -2.5
PDE1C-208ENST00000478736 A0A096LNI7 61 aa-0.56□□□□□ -2.5
PDE1C-208ENST00000478736 APELAP0DMC3 54 aa-0.56□□□□□ -2.5
PDE1C-208ENST00000478736 WFDC10BQ8IUB3 73 aa-0.56□□□□□ -2.5
PDE1C-208ENST00000478736 RHPN1-AS1Q9BWJ2 59 aa-0.57□□□□□ -2.5
PDE1C-208ENST00000478736 M0R1W7 72 aa-0.58□□□□□ -2.5
PDE1C-208ENST00000478736 M0QY20 66 aa-0.6□□□□□ -2.51
PDE1C-208ENST00000478736 SERF2P84101 59 aa-0.6□□□□□ -2.51
PDE1C-208ENST00000478736 NMES1Q9C002 83 aa-0.61□□□□□ -2.51
PDE1C-208ENST00000478736 TMEM167BQ9NRX6 74 aa-0.61□□□□□ -2.51
PDE1C-208ENST00000478736 A0A087WWC5 75 aa-0.62□□□□□ -2.51
PDE1C-208ENST00000478736 DEFB131AP59861 70 aa-0.62□□□□□ -2.51
PDE1C-208ENST00000478736 ABRACLQ9P1F3 81 aa-0.62□□□□□ -2.51
PDE1C-208ENST00000478736 IGIPA6NJ69 53 aa-0.63□□□□□ -2.51
PDE1C-208ENST00000478736 LINC00308Q8TCZ7 52 aa-0.63□□□□□ -2.51
PDE1C-208ENST00000478736 KAAG1Q9UBP8 84 aa-0.63□□□□□ -2.51
PDE1C-208ENST00000478736 SMIM27A0A1W2PRY6 76 aa-0.66□□□□□ -2.52
PDE1C-208ENST00000478736 LINC01590Q5TEZ4 76 aa-0.67□□□□□ -2.52
PDE1C-208ENST00000478736 PRCDQ00LT1 54 aa-0.68□□□□□ -2.52
PDE1C-208ENST00000478736 TMEM167AQ8TBQ9 72 aa-0.68□□□□□ -2.52
PDE1C-208ENST00000478736 H0YGX0 51 aa-0.69□□□□□ -2.52
PDE1C-208ENST00000478736 NDUFA1O15239 70 aa-0.69□□□□□ -2.52
PDE1C-208ENST00000478736 S100ZQ8WXG8 99 aa-0.69□□□□□ -2.52
PDE1C-208ENST00000478736 GCC2Q8IWJ2 1684 aa-0.69□□□□□ -2.52
PDE1C-208ENST00000478736 POLR2KP53803 58 aaKnown RBP-0.72□□□□□ -2.52
PDE1C-208ENST00000478736 SMIM2Q9BVW6 85 aa-0.72□□□□□ -2.52
PDE1C-208ENST00000478736 SMIM31A0A1B0GVY4 71 aa-0.74□□□□□ -2.53
PDE1C-208ENST00000478736 PLNP26678 52 aa-0.76□□□□□ -2.53
PDE1C-208ENST00000478736 TOMM7Q9P0U1 55 aa-0.77□□□□□ -2.53
PDE1C-208ENST00000478736 K7EIM0 57 aa-0.78□□□□□ -2.53
PDE1C-208ENST00000478736 ARHGAP5-AS1Q96IT6 56 aa-0.8□□□□□ -2.54
PDE1C-208ENST00000478736 SNRPGP15A8MWD9 76 aa-0.83□□□□□ -2.54
PDE1C-208ENST00000478736 SNRPGP62308 76 aaKnown RBP-0.83□□□□□ -2.54
PDE1C-208ENST00000478736 RPL39P5Q59GN2 51 aa-0.83□□□□□ -2.54
PDE1C-208ENST00000478736 CMC2Q9NRP2 79 aa-0.83□□□□□ -2.54
PDE1C-208ENST00000478736 RPL39P62891 51 aaKnown RBP-0.91□□□□□ -2.56
PDE1C-208ENST00000478736 RPL39LQ96EH5 51 aaKnown RBP-0.91□□□□□ -2.56
PDE1C-208ENST00000478736 TOMM5Q8N4H5 51 aa-1.13□□□□□ -2.59
Retrieved 78 of 20,778 RNA–protein pairs in 64.7 ms