RNA–Protein interactions for RNA: ENST00000478563.1

CDK13-204, Transcript of cyclin dependent kinase 13, humanhuman

TSL 4

Gene CDK13, Length 700 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-204ENST00000478563 MYCBP2O75592 4640 aa0.76□□□□□ -2.29
CDK13-204ENST00000478563 FAT2Q9NYQ8 4349 aa0.76□□□□□ -2.29
CDK13-204ENST00000478563 MUC5BQ9HC84 5762 aaPredicted RBP0.74□□□□□ -2.29
CDK13-204ENST00000478563 PLECQ15149 4684 aaKnown RBP0.74□□□□□ -2.29
CDK13-204ENST00000478563 MUC12Q9UKN1 5478 aa0.74□□□□□ -2.29
CDK13-204ENST00000478563 LRP2P98164 4655 aa0.74□□□□□ -2.29
CDK13-204ENST00000478563 LRP1BQ9NZR2 4599 aa0.73□□□□□ -2.29
CDK13-204ENST00000478563 USH2AO75445 5202 aa0.73□□□□□ -2.29
CDK13-204ENST00000478563 H3BUX3 64 aa0.73□□□□□ -2.29
CDK13-204ENST00000478563 DNAH10Q8IVF4 4471 aa0.72□□□□□ -2.29
CDK13-204ENST00000478563 DSTQ03001 7570 aaKnown RBP0.72□□□□□ -2.29
CDK13-204ENST00000478563 PKHD1L1Q86WI1 4243 aa0.72□□□□□ -2.29
CDK13-204ENST00000478563 DEFB136Q30KP8 78 aa0.72□□□□□ -2.29
CDK13-204ENST00000478563 MDN1Q9NU22 5596 aa0.72□□□□□ -2.29
CDK13-204ENST00000478563 FAT1Q14517 4588 aa0.72□□□□□ -2.29
CDK13-204ENST00000478563 M0QZ58 72 aa0.71□□□□□ -2.3
CDK13-204ENST00000478563 DEFB135Q30KP9 77 aa0.71□□□□□ -2.3
CDK13-204ENST00000478563 DNAH6Q9C0G6 4158 aa0.7□□□□□ -2.3
CDK13-204ENST00000478563 PKD1P98161 4303 aa0.7□□□□□ -2.3
CDK13-204ENST00000478563 LRP1Q07954 4544 aaKnown RBP0.7□□□□□ -2.3
CDK13-204ENST00000478563 A0A096LPF7 62 aa0.7□□□□□ -2.3
CDK13-204ENST00000478563 A0A096LNI7 61 aa0.69□□□□□ -2.3
CDK13-204ENST00000478563 SPART-AS1P0CW21 52 aa0.69□□□□□ -2.3
CDK13-204ENST00000478563 VPS13BQ7Z7G8 4022 aa0.68□□□□□ -2.3
CDK13-204ENST00000478563 DNAH3Q8TD57 4116 aa0.68□□□□□ -2.3
CDK13-204ENST00000478563 STARD9Q9P2P6 4700 aa0.68□□□□□ -2.3
CDK13-204ENST00000478563 DNAH11Q96DT5 4516 aa0.67□□□□□ -2.3
CDK13-204ENST00000478563 H3BNG1 76 aa0.67□□□□□ -2.3
CDK13-204ENST00000478563 M0R2T5 61 aa0.67□□□□□ -2.3
CDK13-204ENST00000478563 DNAH5Q8TE73 4624 aa0.67□□□□□ -2.3
CDK13-204ENST00000478563 VPS13DQ5THJ4 4388 aa0.67□□□□□ -2.3
CDK13-204ENST00000478563 PHGR1C9JFL3 82 aa0.66□□□□□ -2.3
CDK13-204ENST00000478563 LINC01556Q5JQF7 62 aa0.66□□□□□ -2.3
CDK13-204ENST00000478563 DNAH2Q9P225 4427 aa0.66□□□□□ -2.3
CDK13-204ENST00000478563 APOBP04114 4563 aaKnown RBP0.65□□□□□ -2.3
CDK13-204ENST00000478563 TNP1P09430 55 aa0.65□□□□□ -2.31
CDK13-204ENST00000478563 SYNE1Q8NF91 8797 aaKnown RBP0.65□□□□□ -2.31
CDK13-204ENST00000478563 DEFB4AO15263 64 aa0.64□□□□□ -2.31
CDK13-204ENST00000478563 HTN3P15516 51 aa0.64□□□□□ -2.31
CDK13-204ENST00000478563 MUC5ACP98088 5654 aa0.64□□□□□ -2.31
CDK13-204ENST00000478563 DNAH17Q9UFH2 4485 aa0.62□□□□□ -2.31
CDK13-204ENST00000478563 TNXBP22105 4242 aa0.61□□□□□ -2.31
CDK13-204ENST00000478563 C9orf92A6NGG3 77 aa0.61□□□□□ -2.31
CDK13-204ENST00000478563 HRNRQ86YZ3 2850 aaPredicted RBP0.61□□□□□ -2.31
CDK13-204ENST00000478563 LPAP08519 4548 aa0.59□□□□□ -2.32
CDK13-204ENST00000478563 PRM1P04553 51 aa0.57□□□□□ -2.32
CDK13-204ENST00000478563 RPS29P62273 56 aaKnown RBP0.57□□□□□ -2.32
CDK13-204ENST00000478563 MUC17Q685J3 4493 aa0.54□□□□□ -2.32
CDK13-204ENST00000478563 KRTAP19-6Q3LI70 58 aa0.53□□□□□ -2.32
CDK13-204ENST00000478563 DNAH8Q96JB1 4490 aa0.52□□□□□ -2.33
CDK13-204ENST00000478563 SMR3BP02814 79 aaPredicted RBP0.5□□□□□ -2.33
CDK13-204ENST00000478563 SPRR2EP22531 72 aa0.5□□□□□ -2.33
CDK13-204ENST00000478563 SPRR2BP35325 72 aa0.5□□□□□ -2.33
CDK13-204ENST00000478563 SPRR2AP35326 72 aa0.5□□□□□ -2.33
CDK13-204ENST00000478563 KRTAP8-1Q8IUC2 63 aa0.5□□□□□ -2.33
CDK13-204ENST00000478563 SPRR2DP22532 72 aa0.49□□□□□ -2.33
CDK13-204ENST00000478563 FLGP20930 4061 aaPredicted RBP0.46□□□□□ -2.34
CDK13-204ENST00000478563 MT4P47944 62 aa0.46□□□□□ -2.34
CDK13-204ENST00000478563 MT1HL1P0DM35 61 aa0.45□□□□□ -2.34
CDK13-204ENST00000478563 KRTAP19-5Q3LI72 72 aa0.43□□□□□ -2.34
CDK13-204ENST00000478563 MT1HP80294 61 aa0.42□□□□□ -2.34
CDK13-204ENST00000478563 KRTAP6-2Q3LI66 62 aa0.42□□□□□ -2.34
CDK13-204ENST00000478563 MT1AP04731 61 aa0.41□□□□□ -2.34
CDK13-204ENST00000478563 SPRR2FQ96RM1 72 aa0.41□□□□□ -2.34
CDK13-204ENST00000478563 SPRR2GQ9BYE4 73 aa0.41□□□□□ -2.34
CDK13-204ENST00000478563 KRTAP19-2Q3LHN2 52 aa0.4□□□□□ -2.35
CDK13-204ENST00000478563 MT1EP04732 61 aa0.38□□□□□ -2.35
CDK13-204ENST00000478563 MT1XP80297 61 aa0.38□□□□□ -2.35
CDK13-204ENST00000478563 KRTAP19-8Q3LI54 63 aa0.38□□□□□ -2.35
CDK13-204ENST00000478563 MT1LQ93083 61 aa0.37□□□□□ -2.35
CDK13-204ENST00000478563 MT1BP07438 61 aa0.35□□□□□ -2.35
CDK13-204ENST00000478563 KRTAP20-2Q3LI61 65 aa0.34□□□□□ -2.36
CDK13-204ENST00000478563 KRTAP19-7Q3SYF9 63 aa0.34□□□□□ -2.36
CDK13-204ENST00000478563 MT2AP02795 61 aa0.32□□□□□ -2.36
CDK13-204ENST00000478563 MT1FP04733 61 aa0.32□□□□□ -2.36
CDK13-204ENST00000478563 MT1GP13640 62 aa0.32□□□□□ -2.36
CDK13-204ENST00000478563 KRTAP6-1Q3LI64 71 aa0.29□□□□□ -2.36
CDK13-204ENST00000478563 MT1MQ8N339 61 aa0.29□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 83.2 ms