RNA–Protein interactions for RNA: ENST00000475403.2

LSAMP-204, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-204ENST00000475403 M0QZ58 72 aa3.18□□□□□ -1.9
LSAMP-204ENST00000475403 PLAC4Q8WY50 150 aa3.17□□□□□ -1.9
LSAMP-204ENST00000475403 PP632Q6XCG6 107 aa3.13□□□□□ -1.91
LSAMP-204ENST00000475403 SPRR2EP22531 72 aa3.12□□□□□ -1.91
LSAMP-204ENST00000475403 SPRR2BP35325 72 aa3.12□□□□□ -1.91
LSAMP-204ENST00000475403 SPRR2AP35326 72 aa3.12□□□□□ -1.91
LSAMP-204ENST00000475403 CAMK2N1Q7Z7J9 78 aa3.12□□□□□ -1.91
LSAMP-204ENST00000475403 KRTAP2-2Q9BYT5 123 aa3.12□□□□□ -1.91
LSAMP-204ENST00000475403 KRTAP2-1Q9BYU5 128 aa3.12□□□□□ -1.91
LSAMP-204ENST00000475403 SPRR2FQ96RM1 72 aa3.09□□□□□ -1.91
LSAMP-204ENST00000475403 GPR98Q8WXG9 6306 aa3.08□□□□□ -1.92
LSAMP-204ENST00000475403 KRTAP10-5P60370 271 aa3.07□□□□□ -1.92
LSAMP-204ENST00000475403 MT1BP07438 61 aa3.05□□□□□ -1.92
LSAMP-204ENST00000475403 SPRR2DP22532 72 aa3.03□□□□□ -1.92
LSAMP-204ENST00000475403 PRO2289Q9P1D8 64 aa3.03□□□□□ -1.92
LSAMP-204ENST00000475403 SPRR5A0A1B0GTR4 108 aa3.02□□□□□ -1.93
LSAMP-204ENST00000475403 KRTAP23-1A1A580 65 aa3.01□□□□□ -1.93
LSAMP-204ENST00000475403 LCE5AQ5TCM9 118 aa3.01□□□□□ -1.93
LSAMP-204ENST00000475403 LCE4AQ5TA78 99 aa3□□□□□ -1.93
LSAMP-204ENST00000475403 KRTAP19-8Q3LI54 63 aa2.99□□□□□ -1.93
LSAMP-204ENST00000475403 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.98□□□□□ -1.93
LSAMP-204ENST00000475403 LCE1AQ5T7P2 110 aa2.97□□□□□ -1.93
LSAMP-204ENST00000475403 KRTAP8-1Q8IUC2 63 aa2.97□□□□□ -1.93
LSAMP-204ENST00000475403 SPRR2GQ9BYE4 73 aa2.97□□□□□ -1.93
LSAMP-204ENST00000475403 INE1O15225 51 aa2.96□□□□□ -1.94
LSAMP-204ENST00000475403 R4GN34 69 aa2.92□□□□□ -1.94
LSAMP-204ENST00000475403 DSTQ03001 7570 aaKnown RBP2.88□□□□□ -1.95
LSAMP-204ENST00000475403 TNP1P09430 55 aa2.82□□□□□ -1.96
LSAMP-204ENST00000475403 MT1XP80297 61 aa2.79□□□□□ -1.96
LSAMP-204ENST00000475403 AHNAK2Q8IVF2 5795 aa2.68□□□□□ -1.98
LSAMP-204ENST00000475403 MT4P47944 62 aa2.68□□□□□ -1.98
LSAMP-204ENST00000475403 HMCN1Q96RW7 5635 aa2.67□□□□□ -1.98
LSAMP-204ENST00000475403 KRTAP10-7P60409 375 aaPredicted RBP2.67□□□□□ -1.98
LSAMP-204ENST00000475403 KRTAP5-10Q6L8G5 202 aa2.67□□□□□ -1.98
LSAMP-204ENST00000475403 KRTAP10-12P60413 245 aa2.64□□□□□ -1.99
LSAMP-204ENST00000475403 KRTAP5-7Q6L8G8 165 aa2.62□□□□□ -1.99
LSAMP-204ENST00000475403 KRTAP5-4Q6L8H1 288 aa2.59□□□□□ -1.99
LSAMP-204ENST00000475403 KRTAP19-3Q7Z4W3 81 aa2.57□□□□□ -2
LSAMP-204ENST00000475403 LCE3AQ5TA76 89 aa2.55□□□□□ -2
LSAMP-204ENST00000475403 KRTAP4-4Q9BYR3 166 aa2.51□□□□□ -2.01
LSAMP-204ENST00000475403 MT1EP04732 61 aa2.5□□□□□ -2.01
LSAMP-204ENST00000475403 KRTAP19-7Q3SYF9 63 aa2.48□□□□□ -2.01
LSAMP-204ENST00000475403 KRTAP5-1Q6L8H4 278 aa2.47□□□□□ -2.01
LSAMP-204ENST00000475403 MT1GP13640 62 aa2.45□□□□□ -2.02
LSAMP-204ENST00000475403 KRTAP12-3P60328 96 aa2.44□□□□□ -2.02
LSAMP-204ENST00000475403 KRTAP5-2Q701N4 177 aa2.41□□□□□ -2.02
LSAMP-204ENST00000475403 MT1MQ8N339 61 aa2.41□□□□□ -2.02
LSAMP-204ENST00000475403 KRTAP20-2Q3LI61 65 aa2.38□□□□□ -2.03
LSAMP-204ENST00000475403 KRTAP19-5Q3LI72 72 aa2.37□□□□□ -2.03
LSAMP-204ENST00000475403 MT3P25713 68 aa2.36□□□□□ -2.03
LSAMP-204ENST00000475403 KRTAP4-3Q9BYR4 195 aa2.36□□□□□ -2.03
LSAMP-204ENST00000475403 AHNAKQ09666 5890 aaKnown RBP2.33□□□□□ -2.04
LSAMP-204ENST00000475403 MT1LQ93083 61 aa2.33□□□□□ -2.04
LSAMP-204ENST00000475403 KRTAP12-4P60329 112 aa2.32□□□□□ -2.04
LSAMP-204ENST00000475403 LCE3CQ5T5A8 94 aa2.32□□□□□ -2.04
LSAMP-204ENST00000475403 KRTAP5-11Q6L8G4 156 aa2.31□□□□□ -2.04
LSAMP-204ENST00000475403 MUC5ACP98088 5654 aa2.27□□□□□ -2.05
LSAMP-204ENST00000475403 MUC5BQ9HC84 5762 aaPredicted RBP2.25□□□□□ -2.05
LSAMP-204ENST00000475403 KRTAP5-8O75690 187 aa2.21□□□□□ -2.06
LSAMP-204ENST00000475403 KRTAP5-5Q701N2 237 aaPredicted RBP2.21□□□□□ -2.06
LSAMP-204ENST00000475403 KRTAP9-6A8MVA2 160 aa2.19□□□□□ -2.06
LSAMP-204ENST00000475403 SYNE1Q8NF91 8797 aaKnown RBP2.16□□□□□ -2.06
LSAMP-204ENST00000475403 OBSCNQ5VST9 7968 aa2.12□□□□□ -2.07
LSAMP-204ENST00000475403 LCE1EQ5T753 118 aa2.08□□□□□ -2.08
LSAMP-204ENST00000475403 KRTAP6-1Q3LI64 71 aa1.99□□□□□ -2.09
LSAMP-204ENST00000475403 MT1AP04731 61 aa1.98□□□□□ -2.09
LSAMP-204ENST00000475403 KRTAP6-2Q3LI66 62 aa1.98□□□□□ -2.09
LSAMP-204ENST00000475403 PRM1P04553 51 aa1.87□□□□□ -2.11
LSAMP-204ENST00000475403 LCE3EQ5T5B0 92 aa1.86□□□□□ -2.11
LSAMP-204ENST00000475403 LCE3DQ9BYE3 92 aa1.83□□□□□ -2.12
LSAMP-204ENST00000475403 LCE1BQ5T7P3 118 aa1.74□□□□□ -2.13
LSAMP-204ENST00000475403 LCE1FQ5T754 118 aa1.69□□□□□ -2.14
LSAMP-204ENST00000475403 LCE1CQ5T751 118 aa1.63□□□□□ -2.15
LSAMP-204ENST00000475403 PHGR1C9JFL3 82 aa1.62□□□□□ -2.15
LSAMP-204ENST00000475403 MUC19Q7Z5P9 8384 aa1.29□□□□□ -2.2
LSAMP-204ENST00000475403 KRTAP21-1Q3LI58 79 aa1.29□□□□□ -2.2
LSAMP-204ENST00000475403 KRTAP21-2Q3LI59 83 aa1.29□□□□□ -2.2
LSAMP-204ENST00000475403 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 79.7 ms