RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 KRTAP6-1Q3LI64 71 aa0.54□□□□□ -2.32
CALD1-216ENST00000473714 COL5A1-AS1Q5SY13 56 aa0.54□□□□□ -2.32
CALD1-216ENST00000473714 DEFB105AQ8NG35 78 aa0.54□□□□□ -2.32
CALD1-216ENST00000473714 CNFNQ9BYD5 112 aa0.54□□□□□ -2.32
CALD1-216ENST00000473714 TMEM167BQ9NRX6 74 aa0.54□□□□□ -2.32
CALD1-216ENST00000473714 IFI27P40305 119 aaPredicted RBP0.53□□□□□ -2.32
CALD1-216ENST00000473714 C9orf62Q8N4C0 152 aa0.53□□□□□ -2.32
CALD1-216ENST00000473714 ATOX1O00244 68 aa0.52□□□□□ -2.33
CALD1-216ENST00000473714 PMCHL1Q16048 86 aa0.52□□□□□ -2.33
CALD1-216ENST00000473714 Q9H521 79 aa0.52□□□□□ -2.33
CALD1-216ENST00000473714 FAUP35544 74 aaKnown RBP0.51□□□□□ -2.33
CALD1-216ENST00000473714 LINC00158P58513 81 aa0.51□□□□□ -2.33
CALD1-216ENST00000473714 S4R3F8 94 aa0.51□□□□□ -2.33
CALD1-216ENST00000473714 F8WEM9 126 aa0.5□□□□□ -2.33
CALD1-216ENST00000473714 MT-ATP8P03928 68 aa0.5□□□□□ -2.33
CALD1-216ENST00000473714 MT1AP04731 61 aa0.5□□□□□ -2.33
CALD1-216ENST00000473714 IGLV5-48A0A075B6I7 105 aa0.49□□□□□ -2.33
CALD1-216ENST00000473714 MPC2O95563 127 aa0.49□□□□□ -2.33
CALD1-216ENST00000473714 SMIM2Q9BVW6 85 aa0.49□□□□□ -2.33
CALD1-216ENST00000473714 IGIPA6NJ69 53 aa0.48□□□□□ -2.33
CALD1-216ENST00000473714 C3orf79P0CE67 100 aa0.48□□□□□ -2.33
CALD1-216ENST00000473714 SMIM13P0DJ93 91 aa0.48□□□□□ -2.33
CALD1-216ENST00000473714 GNGT1P63211 74 aa0.48□□□□□ -2.33
CALD1-216ENST00000473714 Q5BKY6 102 aa0.48□□□□□ -2.33
CALD1-216ENST00000473714 SERP2Q8N6R1 65 aa0.48□□□□□ -2.33
CALD1-216ENST00000473714 TP53AIP1Q9HCN2 124 aa0.48□□□□□ -2.33
CALD1-216ENST00000473714 C20orf78Q9BR46 151 aa0.47□□□□□ -2.33
CALD1-216ENST00000473714 LINC00472Q9H8W2 130 aa0.47□□□□□ -2.33
CALD1-216ENST00000473714 A0A087WVE0 104 aa0.46□□□□□ -2.34
CALD1-216ENST00000473714 K7EQZ3 153 aa0.46□□□□□ -2.34
CALD1-216ENST00000473714 TOMM5Q8N4H5 51 aa0.46□□□□□ -2.34
CALD1-216ENST00000473714 TRBV7-4A0A0J9YYF1 115 aa0.45□□□□□ -2.34
CALD1-216ENST00000473714 SYS1-DBNDD2H3BUS1 97 aa0.45□□□□□ -2.34
CALD1-216ENST00000473714 COX7BP24311 80 aa0.45□□□□□ -2.34
CALD1-216ENST00000473714 SERF2P84101 59 aa0.45□□□□□ -2.34
CALD1-216ENST00000473714 ETDBQ3ZM63 59 aa0.45□□□□□ -2.34
CALD1-216ENST00000473714 SNHG12Q9BXW3 62 aa0.45□□□□□ -2.34
CALD1-216ENST00000473714 A0A1B0GUT8 65 aa0.44□□□□□ -2.34
CALD1-216ENST00000473714 A0A1B0GU69 56 aa0.43□□□□□ -2.34
CALD1-216ENST00000473714 H0Y9P7 68 aa0.43□□□□□ -2.34
CALD1-216ENST00000473714 H3BUT2 72 aa0.43□□□□□ -2.34
CALD1-216ENST00000473714 M0QZ58 72 aa0.43□□□□□ -2.34
CALD1-216ENST00000473714 LEPROTL1O95214 131 aa0.43□□□□□ -2.34
CALD1-216ENST00000473714 PEA15Q15121 130 aa0.43□□□□□ -2.34
CALD1-216ENST00000473714 MUSTN1Q8IVN3 82 aa0.43□□□□□ -2.34
CALD1-216ENST00000473714 H7BZZ5 65 aa0.42□□□□□ -2.34
CALD1-216ENST00000473714 IGLC3P0DOY3 106 aa0.42□□□□□ -2.34
CALD1-216ENST00000473714 COX8AP10176 69 aa0.41□□□□□ -2.34
CALD1-216ENST00000473714 GNG13Q9P2W3 67 aa0.38□□□□□ -2.35
CALD1-216ENST00000473714 K7EMI3 77 aa0.37□□□□□ -2.35
CALD1-216ENST00000473714 PYY3Q5JQD4 70 aa0.37□□□□□ -2.35
CALD1-216ENST00000473714 MYMXA0A1B0GTQ4 84 aa0.36□□□□□ -2.35
CALD1-216ENST00000473714 K7EP34 96 aa0.36□□□□□ -2.35
CALD1-216ENST00000473714 HIGD1BQ9P298 99 aa0.36□□□□□ -2.35
CALD1-216ENST00000473714 LINC01546A6NGU7 62 aa0.34□□□□□ -2.36
CALD1-216ENST00000473714 KANTRA0A1W2PQU2 76 aa0.33□□□□□ -2.36
CALD1-216ENST00000473714 SMIM27A0A1W2PRY6 76 aa0.33□□□□□ -2.36
CALD1-216ENST00000473714 LINC00308Q8TCZ7 52 aa0.33□□□□□ -2.36
CALD1-216ENST00000473714 MRPL34Q9BQ48 92 aaKnown RBP0.33□□□□□ -2.36
CALD1-216ENST00000473714 ACYP1P07311 99 aa0.32□□□□□ -2.36
CALD1-216ENST00000473714 MMP24-AS1A0A0U1RRL7 71 aa0.31□□□□□ -2.36
CALD1-216ENST00000473714 LINC01549A6NIU2 74 aa0.31□□□□□ -2.36
CALD1-216ENST00000473714 UMAD1C9J7I0 102 aa0.31□□□□□ -2.36
CALD1-216ENST00000473714 NDUFB1O75438 58 aa0.31□□□□□ -2.36
CALD1-216ENST00000473714 LINC00643Q86TS7 51 aa0.31□□□□□ -2.36
CALD1-216ENST00000473714 ADIRFQ15847 76 aa0.3□□□□□ -2.36
CALD1-216ENST00000473714 SMCO4Q9NRQ5 59 aa0.27□□□□□ -2.37
CALD1-216ENST00000473714 ATP5EP2Q5VTU8 51 aa0.24□□□□□ -2.37
CALD1-216ENST00000473714 TNP1P09430 55 aa0.22□□□□□ -2.37
CALD1-216ENST00000473714 BVES-AS1Q5T3Y7 98 aa0.22□□□□□ -2.37
CALD1-216ENST00000473714 PLNP26678 52 aa0.21□□□□□ -2.38
CALD1-216ENST00000473714 C18orf32Q8TCD1 76 aa0.2□□□□□ -2.38
CALD1-216ENST00000473714 PRM1P04553 51 aa0.18□□□□□ -2.38
CALD1-216ENST00000473714 NREPQ16612 68 aa0.17□□□□□ -2.38
CALD1-216ENST00000473714 S100ZQ8WXG8 99 aa0.17□□□□□ -2.38
CALD1-216ENST00000473714 H0YGX0 51 aa0.16□□□□□ -2.38
CALD1-216ENST00000473714 UBL5Q9BZL1 73 aa0.11□□□□□ -2.39
CALD1-216ENST00000473714 ATXN8Q156A1 80 aa0.07□□□□□ -2.4
Retrieved 78 of 20,778 RNA–protein pairs in 40.5 ms