RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 TMEM167BQ9NRX6 74 aa-0.59□□□□□ -2.5
SMC5-202ENST00000471372 ABRACLQ9P1F3 81 aa-0.59□□□□□ -2.5
SMC5-202ENST00000471372 EEA1Q15075 1411 aa-0.59□□□□□ -2.5
SMC5-202ENST00000471372 CCDC180Q9P1Z9 1646 aa-0.6□□□□□ -2.5
SMC5-202ENST00000471372 UTRNP46939 3433 aa-0.6□□□□□ -2.51
SMC5-202ENST00000471372 DEFB131AP59861 70 aa-0.6□□□□□ -2.51
SMC5-202ENST00000471372 WFDC10BQ8IUB3 73 aa-0.6□□□□□ -2.51
SMC5-202ENST00000471372 EFCAB6Q5THR3 1501 aa-0.6□□□□□ -2.51
SMC5-202ENST00000471372 SYCP2Q9BX26 1530 aa-0.6□□□□□ -2.51
SMC5-202ENST00000471372 M0R1W7 72 aa-0.61□□□□□ -2.51
SMC5-202ENST00000471372 EFCAB5A4FU69 1503 aa-0.61□□□□□ -2.51
SMC5-202ENST00000471372 CLTCL1P53675 1640 aa-0.61□□□□□ -2.51
SMC5-202ENST00000471372 ABCA5Q8WWZ7 1642 aa-0.61□□□□□ -2.51
SMC5-202ENST00000471372 NRXN3Q9Y4C0 1643 aa-0.61□□□□□ -2.51
SMC5-202ENST00000471372 IQGAP1P46940 1657 aa-0.62□□□□□ -2.51
SMC5-202ENST00000471372 SERF2P84101 59 aa-0.62□□□□□ -2.51
SMC5-202ENST00000471372 UGGT1Q9NYU2 1555 aa-0.62□□□□□ -2.51
SMC5-202ENST00000471372 AGLP35573 1532 aa-0.63□□□□□ -2.51
SMC5-202ENST00000471372 H0YGX0 51 aa-0.63□□□□□ -2.51
SMC5-202ENST00000471372 KRTAP19-2Q3LHN2 52 aa-0.63□□□□□ -2.51
SMC5-202ENST00000471372 NMES1Q9C002 83 aa-0.63□□□□□ -2.51
SMC5-202ENST00000471372 NFAT5O94916 1531 aa-0.64□□□□□ -2.51
SMC5-202ENST00000471372 ABCA10Q8WWZ4 1543 aa-0.64□□□□□ -2.51
SMC5-202ENST00000471372 TFF3Q07654 80 aa-0.65□□□□□ -2.51
SMC5-202ENST00000471372 TRPM2O94759 1503 aa-0.65□□□□□ -2.51
SMC5-202ENST00000471372 S100ZQ8WXG8 99 aa-0.66□□□□□ -2.52
SMC5-202ENST00000471372 GOLGB1Q14789 3259 aaKnown RBP-0.66□□□□□ -2.52
SMC5-202ENST00000471372 PRXQ9BXM0 1461 aa-0.67□□□□□ -2.52
SMC5-202ENST00000471372 ADCY10Q96PN6 1610 aa-0.67□□□□□ -2.52
SMC5-202ENST00000471372 CPS1P31327 1500 aa-0.67□□□□□ -2.52
SMC5-202ENST00000471372 A0A087WWC5 75 aa-0.67□□□□□ -2.52
SMC5-202ENST00000471372 SMIM2Q9BVW6 85 aa-0.67□□□□□ -2.52
SMC5-202ENST00000471372 PLNP26678 52 aa-0.68□□□□□ -2.52
SMC5-202ENST00000471372 ABCC8Q09428 1581 aa-0.69□□□□□ -2.52
SMC5-202ENST00000471372 FANCD2Q9BXW9 1451 aa-0.69□□□□□ -2.52
SMC5-202ENST00000471372 TTTY10Q9BZA0 68 aa-0.7□□□□□ -2.52
SMC5-202ENST00000471372 NDUFA1O15239 70 aa-0.71□□□□□ -2.52
SMC5-202ENST00000471372 DEFB133Q30KQ1 61 aa-0.71□□□□□ -2.52
SMC5-202ENST00000471372 LINC01590Q5TEZ4 76 aa-0.71□□□□□ -2.52
SMC5-202ENST00000471372 DUOX1Q9NRD9 1551 aa-0.71□□□□□ -2.52
SMC5-202ENST00000471372 RHPN1-AS1Q9BWJ2 59 aa-0.72□□□□□ -2.52
SMC5-202ENST00000471372 SMIM5Q71RC9 77 aa-0.73□□□□□ -2.53
SMC5-202ENST00000471372 CMC2Q9NRP2 79 aa-0.73□□□□□ -2.53
SMC5-202ENST00000471372 DEFB124Q8NES8 71 aa-0.74□□□□□ -2.53
SMC5-202ENST00000471372 TOMM7Q9P0U1 55 aa-0.74□□□□□ -2.53
SMC5-202ENST00000471372 SAMD9LQ8IVG5 1584 aa-0.74□□□□□ -2.53
SMC5-202ENST00000471372 A0A096LNI7 61 aa-0.75□□□□□ -2.53
SMC5-202ENST00000471372 CD52P31358 61 aa-0.75□□□□□ -2.53
SMC5-202ENST00000471372 TOP2AP11388 1531 aaKnown RBP-0.75□□□□□ -2.53
SMC5-202ENST00000471372 ERICH3Q5RHP9 1530 aa-0.75□□□□□ -2.53
SMC5-202ENST00000471372 HTN1P15515 57 aa-0.76□□□□□ -2.53
SMC5-202ENST00000471372 MROH2BQ7Z745 1585 aa-0.77□□□□□ -2.53
SMC5-202ENST00000471372 RPL39P62891 51 aaKnown RBP-0.77□□□□□ -2.53
SMC5-202ENST00000471372 ATP7AQ04656 1500 aa-0.79□□□□□ -2.54
SMC5-202ENST00000471372 RPL39LQ96EH5 51 aaKnown RBP-0.8□□□□□ -2.54
SMC5-202ENST00000471372 IQGAP2Q13576 1575 aa-0.8□□□□□ -2.54
SMC5-202ENST00000471372 SMIM31A0A1B0GVY4 71 aa-0.81□□□□□ -2.54
SMC5-202ENST00000471372 SNRPGP15A8MWD9 76 aa-0.82□□□□□ -2.54
SMC5-202ENST00000471372 H3BUX3 64 aa-0.82□□□□□ -2.54
SMC5-202ENST00000471372 LINC01556Q5JQF7 62 aa-0.82□□□□□ -2.54
SMC5-202ENST00000471372 DEFB104AQ8WTQ1 72 aa-0.83□□□□□ -2.54
SMC5-202ENST00000471372 K7EIM0 57 aa-0.86□□□□□ -2.55
SMC5-202ENST00000471372 GCC2Q8IWJ2 1684 aa-0.88□□□□□ -2.55
SMC5-202ENST00000471372 A0A096LPF7 62 aa-0.89□□□□□ -2.55
SMC5-202ENST00000471372 TOMM5Q8N4H5 51 aa-0.89□□□□□ -2.55
SMC5-202ENST00000471372 ARHGAP5-AS1Q96IT6 56 aa-0.91□□□□□ -2.56
SMC5-202ENST00000471372 APELAP0DMC3 54 aa-0.92□□□□□ -2.56
SMC5-202ENST00000471372 PRCDQ00LT1 54 aa-0.92□□□□□ -2.56
SMC5-202ENST00000471372 TMEM167AQ8TBQ9 72 aa-0.94□□□□□ -2.56
SMC5-202ENST00000471372 HTN3P15516 51 aa-0.97□□□□□ -2.56
SMC5-202ENST00000471372 SNRPGP62308 76 aaKnown RBP-0.97□□□□□ -2.56
SMC5-202ENST00000471372 Q9Y3F1 56 aa-0.98□□□□□ -2.57
SMC5-202ENST00000471372 RPL39P5Q59GN2 51 aa-0.99□□□□□ -2.57
SMC5-202ENST00000471372 DEFB108AA8MXU0 73 aa-1.01□□□□□ -2.57
SMC5-202ENST00000471372 H3BSH0 61 aa-1.04□□□□□ -2.58
SMC5-202ENST00000471372 COX14Q96I36 57 aa-1.04□□□□□ -2.58
SMC5-202ENST00000471372 DEFB108BQ8NET1 73 aa-1.09□□□□□ -2.58
SMC5-202ENST00000471372 STATHP02808 62 aa-1.19□□□□□ -2.6
Retrieved 78 of 20,778 RNA–protein pairs in 65.5 ms