RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 CLTCL1P53675 1640 aa-1.94□□□□□ -2.72
LRCH3-211ENST00000466054 ABCA6Q8N139 1617 aa-1.94□□□□□ -2.72
LRCH3-211ENST00000466054 DCAF1Q9Y4B6 1507 aa-1.94□□□□□ -2.72
LRCH3-211ENST00000466054 H3BUT2 72 aa-1.94□□□□□ -2.72
LRCH3-211ENST00000466054 SNHG12Q9BXW3 62 aa-1.95□□□□□ -2.72
LRCH3-211ENST00000466054 LINC01590Q5TEZ4 76 aa-1.96□□□□□ -2.72
LRCH3-211ENST00000466054 ADCY10Q96PN6 1610 aa-1.96□□□□□ -2.72
LRCH3-211ENST00000466054 A0A096LNI7 61 aa-1.97□□□□□ -2.72
LRCH3-211ENST00000466054 ABCA9Q8IUA7 1624 aa-1.98□□□□□ -2.73
LRCH3-211ENST00000466054 H0YGX0 51 aa-1.98□□□□□ -2.73
LRCH3-211ENST00000466054 DEFB124Q8NES8 71 aa-1.98□□□□□ -2.73
LRCH3-211ENST00000466054 Q9H521 79 aa-1.98□□□□□ -2.73
LRCH3-211ENST00000466054 ST20Q9HBF5 79 aa-1.98□□□□□ -2.73
LRCH3-211ENST00000466054 TRPM2O94759 1503 aa-1.98□□□□□ -2.73
LRCH3-211ENST00000466054 NFAT5O94916 1531 aa-1.98□□□□□ -2.73
LRCH3-211ENST00000466054 IGIPA6NJ69 53 aa-1.99□□□□□ -2.73
LRCH3-211ENST00000466054 PKIAP61925 76 aa-1.99□□□□□ -2.73
LRCH3-211ENST00000466054 ADIRFQ15847 76 aa-1.99□□□□□ -2.73
LRCH3-211ENST00000466054 GNG13Q9P2W3 67 aa-2□□□□□ -2.73
LRCH3-211ENST00000466054 GOLGB1Q14789 3259 aaKnown RBP-2.01□□□□□ -2.73
LRCH3-211ENST00000466054 LINC01549A6NIU2 74 aa-2.01□□□□□ -2.73
LRCH3-211ENST00000466054 TFF3Q07654 80 aa-2.01□□□□□ -2.73
LRCH3-211ENST00000466054 ABCA5Q8WWZ7 1642 aa-2.02□□□□□ -2.73
LRCH3-211ENST00000466054 TDRG1Q3Y452 100 aa-2.02□□□□□ -2.73
LRCH3-211ENST00000466054 TOMM7Q9P0U1 55 aa-2.02□□□□□ -2.73
LRCH3-211ENST00000466054 PRXQ9BXM0 1461 aa-2.02□□□□□ -2.73
LRCH3-211ENST00000466054 C18orf32Q8TCD1 76 aa-2.03□□□□□ -2.73
LRCH3-211ENST00000466054 DEFB104AQ8WTQ1 72 aa-2.03□□□□□ -2.73
LRCH3-211ENST00000466054 HILPDAQ9Y5L2 63 aa-2.03□□□□□ -2.73
LRCH3-211ENST00000466054 V9GYS6 101 aa-2.03□□□□□ -2.73
LRCH3-211ENST00000466054 PDCD5O14737 125 aa-2.05□□□□□ -2.74
LRCH3-211ENST00000466054 PLNP26678 52 aa-2.06□□□□□ -2.74
LRCH3-211ENST00000466054 S100A13Q99584 98 aa-2.06□□□□□ -2.74
LRCH3-211ENST00000466054 IQGAP1P46940 1657 aa-2.06□□□□□ -2.74
LRCH3-211ENST00000466054 LINC01556Q5JQF7 62 aa-2.07□□□□□ -2.74
LRCH3-211ENST00000466054 IQGAP3Q86VI3 1631 aa-2.09□□□□□ -2.74
LRCH3-211ENST00000466054 DUOX1Q9NRD9 1551 aa-2.1□□□□□ -2.75
LRCH3-211ENST00000466054 CPS1P31327 1500 aa-2.1□□□□□ -2.75
LRCH3-211ENST00000466054 ERICH3Q5RHP9 1530 aa-2.11□□□□□ -2.75
LRCH3-211ENST00000466054 UGGT2Q9NYU1 1516 aa-2.11□□□□□ -2.75
LRCH3-211ENST00000466054 TOP2AP11388 1531 aaKnown RBP-2.12□□□□□ -2.75
LRCH3-211ENST00000466054 NDUFA1O15239 70 aa-2.13□□□□□ -2.75
LRCH3-211ENST00000466054 ABCA10Q8WWZ4 1543 aa-2.13□□□□□ -2.75
LRCH3-211ENST00000466054 ATP7AQ04656 1500 aa-2.17□□□□□ -2.76
LRCH3-211ENST00000466054 CCDC18Q5T9S5 1454 aa-2.18□□□□□ -2.76
LRCH3-211ENST00000466054 FANCD2Q9BXW9 1451 aa-2.19□□□□□ -2.76
LRCH3-211ENST00000466054 ABCC8Q09428 1581 aa-2.2□□□□□ -2.76
LRCH3-211ENST00000466054 SAMD9LQ8IVG5 1584 aa-2.2□□□□□ -2.76
LRCH3-211ENST00000466054 H3BUX3 64 aa-2.21□□□□□ -2.76
LRCH3-211ENST00000466054 EFCAB5A4FU69 1503 aa-2.22□□□□□ -2.77
LRCH3-211ENST00000466054 MROH2BQ7Z745 1585 aa-2.23□□□□□ -2.77
LRCH3-211ENST00000466054 SMCO4Q9NRQ5 59 aa-2.23□□□□□ -2.77
LRCH3-211ENST00000466054 RPL39P62891 51 aaKnown RBP-2.27□□□□□ -2.77
LRCH3-211ENST00000466054 CMC2Q9NRP2 79 aa-2.27□□□□□ -2.77
LRCH3-211ENST00000466054 A0A087WWC5 75 aa-2.28□□□□□ -2.77
LRCH3-211ENST00000466054 APELAP0DMC3 54 aa-2.3□□□□□ -2.78
LRCH3-211ENST00000466054 RPL39LQ96EH5 51 aaKnown RBP-2.32□□□□□ -2.78
LRCH3-211ENST00000466054 A0A096LPF7 62 aa-2.33□□□□□ -2.78
LRCH3-211ENST00000466054 SMIM5Q71RC9 77 aa-2.33□□□□□ -2.78
LRCH3-211ENST00000466054 GNG2P59768 71 aa-2.34□□□□□ -2.78
LRCH3-211ENST00000466054 HTN3P15516 51 aa-2.37□□□□□ -2.79
LRCH3-211ENST00000466054 PRCDQ00LT1 54 aa-2.43□□□□□ -2.8
LRCH3-211ENST00000466054 K7EIM0 57 aa-2.45□□□□□ -2.8
LRCH3-211ENST00000466054 TMEM167AQ8TBQ9 72 aa-2.47□□□□□ -2.8
LRCH3-211ENST00000466054 IQGAP2Q13576 1575 aa-2.49□□□□□ -2.81
LRCH3-211ENST00000466054 Q9Y3F1 56 aa-2.5□□□□□ -2.81
LRCH3-211ENST00000466054 H3BSH0 61 aa-2.52□□□□□ -2.81
LRCH3-211ENST00000466054 ARHGAP5-AS1Q96IT6 56 aa-2.52□□□□□ -2.81
LRCH3-211ENST00000466054 SNRPGP15A8MWD9 76 aa-2.56□□□□□ -2.82
LRCH3-211ENST00000466054 COX14Q96I36 57 aa-2.62□□□□□ -2.83
LRCH3-211ENST00000466054 TOMM5Q8N4H5 51 aa-2.7□□□□□ -2.84
LRCH3-211ENST00000466054 GCC2Q8IWJ2 1684 aa-2.71□□□□□ -2.84
LRCH3-211ENST00000466054 RPL39P5Q59GN2 51 aa-2.72□□□□□ -2.84
LRCH3-211ENST00000466054 SNRPGP62308 76 aaKnown RBP-2.73□□□□□ -2.85
LRCH3-211ENST00000466054 SMIM31A0A1B0GVY4 71 aa-2.75□□□□□ -2.85
LRCH3-211ENST00000466054 DEFB108AA8MXU0 73 aa-2.75□□□□□ -2.85
LRCH3-211ENST00000466054 DEFB108BQ8NET1 73 aa-2.77□□□□□ -2.85
LRCH3-211ENST00000466054 STATHP02808 62 aa-2.87□□□□□ -2.87
Retrieved 78 of 20,778 RNA–protein pairs in 131.7 ms