RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 FRYLO94915 3013 aa-0.38□□□□□ -2.47
VBP1-202ENST00000460509 BRCA2P51587 3418 aa-0.38□□□□□ -2.47
VBP1-202ENST00000460509 DNAH10Q8IVF4 4471 aa-0.38□□□□□ -2.47
VBP1-202ENST00000460509 AKAP9Q99996 3911 aa-0.38□□□□□ -2.47
VBP1-202ENST00000460509 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.38□□□□□ -2.47
VBP1-202ENST00000460509 UTP20O75691 2785 aaKnown RBP-0.38□□□□□ -2.47
VBP1-202ENST00000460509 CCDC168Q8NDH2 2452 aa-0.39□□□□□ -2.47
VBP1-202ENST00000460509 NDUFA1O15239 70 aa-0.39□□□□□ -2.47
VBP1-202ENST00000460509 MT1HP80294 61 aa-0.39□□□□□ -2.47
VBP1-202ENST00000460509 CEP350Q5VT06 3117 aa-0.39□□□□□ -2.47
VBP1-202ENST00000460509 SPTBN5Q9NRC6 3674 aaKnown RBP-0.39□□□□□ -2.47
VBP1-202ENST00000460509 LRRK2Q5S007 2527 aa-0.39□□□□□ -2.47
VBP1-202ENST00000460509 ATMQ13315 3056 aa-0.39□□□□□ -2.47
VBP1-202ENST00000460509 PRUNE2Q8WUY3 3088 aa-0.39□□□□□ -2.47
VBP1-202ENST00000460509 XIRP2A4UGR9 3374 aa-0.4□□□□□ -2.47
VBP1-202ENST00000460509 GOLGB1Q14789 3259 aaKnown RBP-0.4□□□□□ -2.47
VBP1-202ENST00000460509 VPS13CQ709C8 3753 aa-0.4□□□□□ -2.47
VBP1-202ENST00000460509 MT1GP13640 62 aa-0.4□□□□□ -2.47
VBP1-202ENST00000460509 DEFB1P60022 68 aa-0.4□□□□□ -2.47
VBP1-202ENST00000460509 ATP7AQ04656 1500 aa-0.4□□□□□ -2.47
VBP1-202ENST00000460509 CDH23Q9H251 3354 aa-0.4□□□□□ -2.47
VBP1-202ENST00000460509 CENPFP49454 3210 aa-0.41□□□□□ -2.47
VBP1-202ENST00000460509 DNAH12Q6ZR08 3092 aa-0.41□□□□□ -2.48
VBP1-202ENST00000460509 ACACAQ13085 2346 aa-0.42□□□□□ -2.48
VBP1-202ENST00000460509 MT1BP07438 61 aa-0.42□□□□□ -2.48
VBP1-202ENST00000460509 POLR2KP53803 58 aaKnown RBP-0.42□□□□□ -2.48
VBP1-202ENST00000460509 CFAP47Q6ZTR5 3102 aa-0.42□□□□□ -2.48
VBP1-202ENST00000460509 VPS13AQ96RL7 3174 aa-0.43□□□□□ -2.48
VBP1-202ENST00000460509 MT1MQ8N339 61 aa-0.43□□□□□ -2.48
VBP1-202ENST00000460509 TOMM5Q8N4H5 51 aa-0.45□□□□□ -2.48
VBP1-202ENST00000460509 MT1FP04733 61 aa-0.46□□□□□ -2.48
VBP1-202ENST00000460509 MT1EP04732 61 aa-0.47□□□□□ -2.48
VBP1-202ENST00000460509 MT1HL1P0DM35 61 aa-0.47□□□□□ -2.48
VBP1-202ENST00000460509 MT1XP80297 61 aa-0.47□□□□□ -2.48
VBP1-202ENST00000460509 KRTAP19-2Q3LHN2 52 aa-0.47□□□□□ -2.48
VBP1-202ENST00000460509 MT2AP02795 61 aa-0.48□□□□□ -2.49
VBP1-202ENST00000460509 SPART-AS1P0CW21 52 aa-0.48□□□□□ -2.49
VBP1-202ENST00000460509 SAMD9LQ8IVG5 1584 aa-0.49□□□□□ -2.49
VBP1-202ENST00000460509 SPTAN1Q13813 2472 aaKnown RBP-0.49□□□□□ -2.49
VBP1-202ENST00000460509 MT1LQ93083 61 aa-0.49□□□□□ -2.49
VBP1-202ENST00000460509 CEP250Q9BV73 2442 aa-0.52□□□□□ -2.49
VBP1-202ENST00000460509 TOP2AP11388 1531 aaKnown RBP-0.56□□□□□ -2.5
VBP1-202ENST00000460509 DEFB4AO15263 64 aa-0.57□□□□□ -2.5
VBP1-202ENST00000460509 LEAP2Q969E1 77 aa-0.59□□□□□ -2.5
VBP1-202ENST00000460509 DUOX1Q9NRD9 1551 aa-0.65□□□□□ -2.51
VBP1-202ENST00000460509 RPS29P62273 56 aaKnown RBP-0.65□□□□□ -2.51
VBP1-202ENST00000460509 MROH2BQ7Z745 1585 aa-0.66□□□□□ -2.51
VBP1-202ENST00000460509 RPL39P62891 51 aaKnown RBP-0.67□□□□□ -2.52
VBP1-202ENST00000460509 DEFB136Q30KP8 78 aa-0.69□□□□□ -2.52
VBP1-202ENST00000460509 TTTY10Q9BZA0 68 aa-0.69□□□□□ -2.52
VBP1-202ENST00000460509 TOMM7Q9P0U1 55 aa-0.69□□□□□ -2.52
VBP1-202ENST00000460509 DEFB104AQ8WTQ1 72 aa-0.71□□□□□ -2.52
VBP1-202ENST00000460509 RPL39LQ96EH5 51 aaKnown RBP-0.74□□□□□ -2.53
VBP1-202ENST00000460509 LINC01590Q5TEZ4 76 aa-0.77□□□□□ -2.53
VBP1-202ENST00000460509 GCC2Q8IWJ2 1684 aa-0.79□□□□□ -2.54
VBP1-202ENST00000460509 SNRPGP62308 76 aaKnown RBP-0.85□□□□□ -2.55
VBP1-202ENST00000460509 A0A096LNI7 61 aa-0.88□□□□□ -2.55
VBP1-202ENST00000460509 LINC01556Q5JQF7 62 aa-0.88□□□□□ -2.55
VBP1-202ENST00000460509 HTN1P15515 57 aa-0.9□□□□□ -2.55
VBP1-202ENST00000460509 DEFB133Q30KQ1 61 aa-0.9□□□□□ -2.55
VBP1-202ENST00000460509 RHPN1-AS1Q9BWJ2 59 aa-0.9□□□□□ -2.55
VBP1-202ENST00000460509 H3BSH0 61 aa-0.91□□□□□ -2.56
VBP1-202ENST00000460509 APELAP0DMC3 54 aa-0.91□□□□□ -2.56
VBP1-202ENST00000460509 HTN3P15516 51 aa-0.92□□□□□ -2.56
VBP1-202ENST00000460509 DEFB124Q8NES8 71 aa-0.92□□□□□ -2.56
VBP1-202ENST00000460509 A0A096LPF7 62 aa-0.93□□□□□ -2.56
VBP1-202ENST00000460509 STATHP02808 62 aa-0.94□□□□□ -2.56
VBP1-202ENST00000460509 CD52P31358 61 aa-0.94□□□□□ -2.56
VBP1-202ENST00000460509 DEFB108AA8MXU0 73 aa-1.01□□□□□ -2.57
VBP1-202ENST00000460509 DEFB108BQ8NET1 73 aa-1.02□□□□□ -2.57
VBP1-202ENST00000460509 H3BUX3 64 aa-1.03□□□□□ -2.57
VBP1-202ENST00000460509 ARHGAP5-AS1Q96IT6 56 aa-1.05□□□□□ -2.58
VBP1-202ENST00000460509 K7EIM0 57 aa-1.07□□□□□ -2.58
VBP1-202ENST00000460509 PRCDQ00LT1 54 aa-1.09□□□□□ -2.58
VBP1-202ENST00000460509 COX14Q96I36 57 aa-1.14□□□□□ -2.59
VBP1-202ENST00000460509 TMEM167AQ8TBQ9 72 aa-1.16□□□□□ -2.6
VBP1-202ENST00000460509 RPL39P5Q59GN2 51 aa-1.2□□□□□ -2.6
VBP1-202ENST00000460509 Q9Y3F1 56 aa-1.23□□□□□ -2.61
Retrieved 78 of 20,778 RNA–protein pairs in 12.4 ms