RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 SPINK4O60575 86 aa1.09□□□□□ -2.23
HMGB1P15-201ENST00000453854 ETDCA0A1B0GVM5 59 aa1.08□□□□□ -2.24
HMGB1P15-201ENST00000453854 K7EMI3 77 aa1.08□□□□□ -2.24
HMGB1P15-201ENST00000453854 SERF2P84101 59 aa1.08□□□□□ -2.24
HMGB1P15-201ENST00000453854 SPRR2EP22531 72 aa1.07□□□□□ -2.24
HMGB1P15-201ENST00000453854 SPRR2BP35325 72 aa1.07□□□□□ -2.24
HMGB1P15-201ENST00000453854 SPRR2AP35326 72 aa1.07□□□□□ -2.24
HMGB1P15-201ENST00000453854 ARHGAP5-AS1Q96IT6 56 aa1.07□□□□□ -2.24
HMGB1P15-201ENST00000453854 MT2AP02795 61 aa1.06□□□□□ -2.24
HMGB1P15-201ENST00000453854 MT1FP04733 61 aa1.06□□□□□ -2.24
HMGB1P15-201ENST00000453854 SNRPGP15A8MWD9 76 aa1.05□□□□□ -2.24
HMGB1P15-201ENST00000453854 SPRR1AP35321 89 aa1.05□□□□□ -2.24
HMGB1P15-201ENST00000453854 NMES1Q9C002 83 aa1.05□□□□□ -2.24
HMGB1P15-201ENST00000453854 AHNAKQ09666 5890 aaKnown RBP1.04□□□□□ -2.24
HMGB1P15-201ENST00000453854 SPRR2DP22532 72 aa1.04□□□□□ -2.24
HMGB1P15-201ENST00000453854 CDKN2A-AS1Q9UH64 79 aa1.04□□□□□ -2.24
HMGB1P15-201ENST00000453854 DEFB105AQ8NG35 78 aa1.03□□□□□ -2.24
HMGB1P15-201ENST00000453854 SPRR2FQ96RM1 72 aa1.03□□□□□ -2.24
HMGB1P15-201ENST00000453854 FXYD6Q9H0Q3 95 aa1.03□□□□□ -2.24
HMGB1P15-201ENST00000453854 SPRR1BP22528 89 aa1.02□□□□□ -2.25
HMGB1P15-201ENST00000453854 FCER1GP30273 86 aa1.02□□□□□ -2.25
HMGB1P15-201ENST00000453854 KRTAP5-10Q6L8G5 202 aa1.01□□□□□ -2.25
HMGB1P15-201ENST00000453854 C9orf92A6NGG3 77 aa1□□□□□ -2.25
HMGB1P15-201ENST00000453854 IGIPA6NJ69 53 aa0.99□□□□□ -2.25
HMGB1P15-201ENST00000453854 H1FX-AS1Q4G0G2 97 aa0.98□□□□□ -2.25
HMGB1P15-201ENST00000453854 PLNP26678 52 aa0.97□□□□□ -2.25
HMGB1P15-201ENST00000453854 CRIP1P50238 77 aa0.97□□□□□ -2.25
HMGB1P15-201ENST00000453854 MUC5BQ9HC84 5762 aaPredicted RBP0.97□□□□□ -2.25
HMGB1P15-201ENST00000453854 H0YAA0 97 aa0.96□□□□□ -2.26
HMGB1P15-201ENST00000453854 IAPPP10997 89 aa0.96□□□□□ -2.26
HMGB1P15-201ENST00000453854 LINC00158P58513 81 aa0.96□□□□□ -2.26
HMGB1P15-201ENST00000453854 PRLHP81277 87 aa0.95□□□□□ -2.26
HMGB1P15-201ENST00000453854 MUC5ACP98088 5654 aa0.94□□□□□ -2.26
HMGB1P15-201ENST00000453854 SPINK1P00995 79 aa0.94□□□□□ -2.26
HMGB1P15-201ENST00000453854 MT4P47944 62 aa0.94□□□□□ -2.26
HMGB1P15-201ENST00000453854 WFDC13Q8IUB5 93 aa0.94□□□□□ -2.26
HMGB1P15-201ENST00000453854 KRTAP8-1Q8IUC2 63 aa0.93□□□□□ -2.26
HMGB1P15-201ENST00000453854 H0YGX0 51 aa0.92□□□□□ -2.26
HMGB1P15-201ENST00000453854 NDUFA1O15239 70 aa0.92□□□□□ -2.26
HMGB1P15-201ENST00000453854 C6orf48Q9UBA6 75 aa0.92□□□□□ -2.26
HMGB1P15-201ENST00000453854 RPS29P62273 56 aaKnown RBP0.91□□□□□ -2.26
HMGB1P15-201ENST00000453854 TMEM167BQ9NRX6 74 aa0.9□□□□□ -2.27
HMGB1P15-201ENST00000453854 MT1BP07438 61 aa0.89□□□□□ -2.27
HMGB1P15-201ENST00000453854 M0QY20 66 aa0.87□□□□□ -2.27
HMGB1P15-201ENST00000453854 SMIM27A0A1W2PRY6 76 aa0.86□□□□□ -2.27
HMGB1P15-201ENST00000453854 LINC01546A6NGU7 62 aa0.86□□□□□ -2.27
HMGB1P15-201ENST00000453854 KRTAP19-3Q7Z4W3 81 aa0.85□□□□□ -2.27
HMGB1P15-201ENST00000453854 TOMM5Q8N4H5 51 aa0.85□□□□□ -2.27
HMGB1P15-201ENST00000453854 TOMM7Q9P0U1 55 aa0.85□□□□□ -2.27
HMGB1P15-201ENST00000453854 RPL39LQ96EH5 51 aaKnown RBP0.84□□□□□ -2.27
HMGB1P15-201ENST00000453854 KRTAP19-8Q3LI54 63 aa0.82□□□□□ -2.28
HMGB1P15-201ENST00000453854 LINC00308Q8TCZ7 52 aa0.82□□□□□ -2.28
HMGB1P15-201ENST00000453854 SYNE1Q8NF91 8797 aaKnown RBP0.79□□□□□ -2.28
HMGB1P15-201ENST00000453854 RPL39P62891 51 aaKnown RBP0.79□□□□□ -2.28
HMGB1P15-201ENST00000453854 SPRR2GQ9BYE4 73 aa0.79□□□□□ -2.28
HMGB1P15-201ENST00000453854 KRTAP20-2Q3LI61 65 aa0.78□□□□□ -2.28
HMGB1P15-201ENST00000453854 MT1XP80297 61 aa0.77□□□□□ -2.29
HMGB1P15-201ENST00000453854 POLR2KP53803 58 aaKnown RBP0.75□□□□□ -2.29
HMGB1P15-201ENST00000453854 SMIM2Q9BVW6 85 aa0.73□□□□□ -2.29
HMGB1P15-201ENST00000453854 S4R3F8 94 aa0.73□□□□□ -2.29
HMGB1P15-201ENST00000453854 MT1EP04732 61 aa0.7□□□□□ -2.3
HMGB1P15-201ENST00000453854 MT1MQ8N339 61 aa0.7□□□□□ -2.3
HMGB1P15-201ENST00000453854 MUC16Q8WXI7 14507 aa0.69□□□□□ -2.3
HMGB1P15-201ENST00000453854 MT1GP13640 62 aa0.68□□□□□ -2.3
HMGB1P15-201ENST00000453854 KRTAP19-7Q3SYF9 63 aa0.68□□□□□ -2.3
HMGB1P15-201ENST00000453854 IGLV5-48A0A075B6I7 105 aa0.66□□□□□ -2.3
HMGB1P15-201ENST00000453854 PHGR1C9JFL3 82 aa0.63□□□□□ -2.31
HMGB1P15-201ENST00000453854 PRM1P04553 51 aa0.63□□□□□ -2.31
HMGB1P15-201ENST00000453854 MT1LQ93083 61 aa0.62□□□□□ -2.31
HMGB1P15-201ENST00000453854 KRTAP21-1Q3LI58 79 aa0.61□□□□□ -2.31
HMGB1P15-201ENST00000453854 KRTAP19-5Q3LI72 72 aa0.61□□□□□ -2.31
HMGB1P15-201ENST00000453854 M0QZ58 72 aa0.59□□□□□ -2.31
HMGB1P15-201ENST00000453854 KRTAP6-2Q3LI66 62 aa0.58□□□□□ -2.32
HMGB1P15-201ENST00000453854 MMP24-AS1A0A0U1RRL7 71 aa0.57□□□□□ -2.32
HMGB1P15-201ENST00000453854 KRTAP6-1Q3LI64 71 aa0.55□□□□□ -2.32
HMGB1P15-201ENST00000453854 MT1AP04731 61 aa0.52□□□□□ -2.33
HMGB1P15-201ENST00000453854 TNP1P09430 55 aa0.45□□□□□ -2.34
Retrieved 77 of 20,778 RNA–protein pairs in 87.9 ms