RNA–Protein interactions for RNA: ENST00000451838.1

SHOC2-203, Transcript of SHOC2, leucine rich repeat scaffold protein, humanhuman

TSL 2

Gene SHOC2, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOC2-203ENST00000451838 TLN1Q9Y490 2541 aaKnown RBP0.48□□□□□ -2.33
SHOC2-203ENST00000451838 NSD1Q96L73 2696 aaPredicted RBP0.48□□□□□ -2.33
SHOC2-203ENST00000451838 Q5VSD8 79 aa0.48□□□□□ -2.33
SHOC2-203ENST00000451838 GVINP1Q7Z2Y8 2422 aa0.48□□□□□ -2.33
SHOC2-203ENST00000451838 ABCA13Q86UQ4 5058 aa0.48□□□□□ -2.33
SHOC2-203ENST00000451838 NBEAL1Q6ZS30 2694 aa0.48□□□□□ -2.33
SHOC2-203ENST00000451838 SETD2Q9BYW2 2564 aaPredicted RBP0.48□□□□□ -2.33
SHOC2-203ENST00000451838 HTN3P15516 51 aa0.47□□□□□ -2.33
SHOC2-203ENST00000451838 CENPEQ02224 2701 aa0.47□□□□□ -2.33
SHOC2-203ENST00000451838 ZFYVE26Q68DK2 2539 aa0.47□□□□□ -2.33
SHOC2-203ENST00000451838 MT1HL1P0DM35 61 aa0.47□□□□□ -2.33
SHOC2-203ENST00000451838 SPTAN1Q13813 2472 aaKnown RBP0.47□□□□□ -2.33
SHOC2-203ENST00000451838 JMJD1CQ15652 2540 aa0.47□□□□□ -2.33
SHOC2-203ENST00000451838 ITPR2Q14571 2701 aa0.46□□□□□ -2.34
SHOC2-203ENST00000451838 TLN2Q9Y4G6 2542 aa0.46□□□□□ -2.34
SHOC2-203ENST00000451838 KRTAP8-1Q8IUC2 63 aa0.46□□□□□ -2.34
SHOC2-203ENST00000451838 C2CD3Q4AC94 2353 aa0.46□□□□□ -2.34
SHOC2-203ENST00000451838 FLNBO75369 2602 aaKnown RBP0.46□□□□□ -2.34
SHOC2-203ENST00000451838 SPINK6Q6UWN8 80 aa0.45□□□□□ -2.34
SHOC2-203ENST00000451838 FLNAP21333 2647 aaKnown RBP0.45□□□□□ -2.34
SHOC2-203ENST00000451838 SPRR2GQ9BYE4 73 aa0.45□□□□□ -2.34
SHOC2-203ENST00000451838 FLG2Q5D862 2391 aaPredicted RBP0.44□□□□□ -2.34
SHOC2-203ENST00000451838 KRTAP19-5Q3LI72 72 aa0.44□□□□□ -2.34
SHOC2-203ENST00000451838 LRRK2Q5S007 2527 aa0.44□□□□□ -2.34
SHOC2-203ENST00000451838 NAV2Q8IVL1 2488 aa0.44□□□□□ -2.34
SHOC2-203ENST00000451838 MYO9AB2RTY4 2548 aa0.43□□□□□ -2.34
SHOC2-203ENST00000451838 CEP290O15078 2479 aa0.43□□□□□ -2.34
SHOC2-203ENST00000451838 A0A0D9SG42 100 aa0.43□□□□□ -2.34
SHOC2-203ENST00000451838 KRTAP19-8Q3LI54 63 aa0.43□□□□□ -2.34
SHOC2-203ENST00000451838 CCDC168Q8NDH2 2452 aa0.43□□□□□ -2.34
SHOC2-203ENST00000451838 F8P00451 2351 aa0.43□□□□□ -2.34
SHOC2-203ENST00000451838 ATRQ13535 2644 aa0.42□□□□□ -2.34
SHOC2-203ENST00000451838 POLQO75417 2590 aa0.42□□□□□ -2.34
SHOC2-203ENST00000451838 C9orf92A6NGG3 77 aa0.42□□□□□ -2.34
SHOC2-203ENST00000451838 SMR3BP02814 79 aaPredicted RBP0.42□□□□□ -2.34
SHOC2-203ENST00000451838 SPG11Q96JI7 2443 aa0.42□□□□□ -2.34
SHOC2-203ENST00000451838 CSPG4Q6UVK1 2322 aa0.42□□□□□ -2.34
SHOC2-203ENST00000451838 UBE2DNLQ8IWF7 75 aa0.42□□□□□ -2.34
SHOC2-203ENST00000451838 TPRP12270 2363 aaKnown RBP0.42□□□□□ -2.34
SHOC2-203ENST00000451838 MT1XP80297 61 aa0.42□□□□□ -2.34
SHOC2-203ENST00000451838 SONP18583 2426 aaKnown RBP0.41□□□□□ -2.34
SHOC2-203ENST00000451838 ABCA12Q86UK0 2595 aa0.41□□□□□ -2.34
SHOC2-203ENST00000451838 STAB2Q8WWQ8 2551 aa0.4□□□□□ -2.34
SHOC2-203ENST00000451838 MT1BP07438 61 aa0.4□□□□□ -2.34
SHOC2-203ENST00000451838 TNP1P09430 55 aa0.4□□□□□ -2.35
SHOC2-203ENST00000451838 MTORP42345 2549 aa0.4□□□□□ -2.35
SHOC2-203ENST00000451838 MT1HP80294 61 aa0.39□□□□□ -2.35
SHOC2-203ENST00000451838 ACANP16112 2415 aa0.39□□□□□ -2.35
SHOC2-203ENST00000451838 KRTAP19-7Q3SYF9 63 aa0.38□□□□□ -2.35
SHOC2-203ENST00000451838 RIF1Q5UIP0 2472 aaKnown RBP0.38□□□□□ -2.35
SHOC2-203ENST00000451838 MT1EP04732 61 aa0.38□□□□□ -2.35
SHOC2-203ENST00000451838 MGAM2Q2M2H8 2515 aa0.38□□□□□ -2.35
SHOC2-203ENST00000451838 FASNP49327 2511 aaKnown RBP0.37□□□□□ -2.35
SHOC2-203ENST00000451838 MT1AP04731 61 aa0.37□□□□□ -2.35
SHOC2-203ENST00000451838 USH2AO75445 5202 aa0.37□□□□□ -2.35
SHOC2-203ENST00000451838 MT1FP04733 61 aa0.37□□□□□ -2.35
SHOC2-203ENST00000451838 MT2AP02795 61 aa0.36□□□□□ -2.35
SHOC2-203ENST00000451838 KRTAP19-3Q7Z4W3 81 aa0.36□□□□□ -2.35
SHOC2-203ENST00000451838 ACACBO00763 2458 aa0.36□□□□□ -2.35
SHOC2-203ENST00000451838 MT1LQ93083 61 aa0.36□□□□□ -2.35
SHOC2-203ENST00000451838 RNF213Q63HN8 5207 aa0.34□□□□□ -2.35
SHOC2-203ENST00000451838 SPRR2DP22532 72 aa0.34□□□□□ -2.36
SHOC2-203ENST00000451838 SYNE1Q8NF91 8797 aaKnown RBP0.33□□□□□ -2.36
SHOC2-203ENST00000451838 PHGR1C9JFL3 82 aa0.33□□□□□ -2.36
SHOC2-203ENST00000451838 SPRR2EP22531 72 aa0.32□□□□□ -2.36
SHOC2-203ENST00000451838 SPRR2BP35325 72 aa0.32□□□□□ -2.36
SHOC2-203ENST00000451838 SPRR2AP35326 72 aa0.32□□□□□ -2.36
SHOC2-203ENST00000451838 SPRR2FQ96RM1 72 aa0.32□□□□□ -2.36
SHOC2-203ENST00000451838 KRTAP20-2Q3LI61 65 aa0.31□□□□□ -2.36
SHOC2-203ENST00000451838 MT1MQ8N339 61 aa0.3□□□□□ -2.36
SHOC2-203ENST00000451838 PRM1P04553 51 aa0.3□□□□□ -2.36
SHOC2-203ENST00000451838 DMBT1Q9UGM3 2413 aaPredicted RBP0.3□□□□□ -2.36
SHOC2-203ENST00000451838 KRTAP6-2Q3LI66 62 aa0.3□□□□□ -2.36
SHOC2-203ENST00000451838 M0R2T5 61 aa0.29□□□□□ -2.36
SHOC2-203ENST00000451838 KRTAP6-1Q3LI64 71 aa0.29□□□□□ -2.36
SHOC2-203ENST00000451838 MT1GP13640 62 aa0.27□□□□□ -2.37
SHOC2-203ENST00000451838 MUC12Q9UKN1 5478 aa0.26□□□□□ -2.37
SHOC2-203ENST00000451838 MT4P47944 62 aa0.16□□□□□ -2.38
Retrieved 78 of 20,778 RNA–protein pairs in 72.1 ms