RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 MUC3AQ02505 3323 aa-0.78□□□□□ -2.53
PTPN4-205ENST00000433888 MT1EP04732 61 aa-0.78□□□□□ -2.53
PTPN4-205ENST00000433888 MT1HL1P0DM35 61 aa-0.78□□□□□ -2.53
PTPN4-205ENST00000433888 ABCC8Q09428 1581 aa-0.79□□□□□ -2.54
PTPN4-205ENST00000433888 NFAT5O94916 1531 aa-0.79□□□□□ -2.54
PTPN4-205ENST00000433888 MT1LQ93083 61 aa-0.79□□□□□ -2.54
PTPN4-205ENST00000433888 ADCY10Q96PN6 1610 aa-0.79□□□□□ -2.54
PTPN4-205ENST00000433888 DCHS1Q96JQ0 3298 aa-0.8□□□□□ -2.54
PTPN4-205ENST00000433888 DNAH14Q0VDD8 3507 aa-0.8□□□□□ -2.54
PTPN4-205ENST00000433888 MT1MQ8N339 61 aa-0.8□□□□□ -2.54
PTPN4-205ENST00000433888 EP400Q96L91 3159 aa-0.81□□□□□ -2.54
PTPN4-205ENST00000433888 FANCD2Q9BXW9 1451 aa-0.81□□□□□ -2.54
PTPN4-205ENST00000433888 USP34Q70CQ2 3546 aa-0.81□□□□□ -2.54
PTPN4-205ENST00000433888 MT2AP02795 61 aa-0.82□□□□□ -2.54
PTPN4-205ENST00000433888 MT1BP07438 61 aa-0.82□□□□□ -2.54
PTPN4-205ENST00000433888 CFAP47Q6ZTR5 3102 aa-0.82□□□□□ -2.54
PTPN4-205ENST00000433888 CENPEQ02224 2701 aa-0.84□□□□□ -2.54
PTPN4-205ENST00000433888 CLTCL1P53675 1640 aa-0.86□□□□□ -2.55
PTPN4-205ENST00000433888 KRTAP19-6Q3LI70 58 aa-0.87□□□□□ -2.55
PTPN4-205ENST00000433888 LEAP2Q969E1 77 aa-0.88□□□□□ -2.55
PTPN4-205ENST00000433888 LOC400499M0QZD8 3231 aa-0.88□□□□□ -2.55
PTPN4-205ENST00000433888 UNC80Q8N2C7 3258 aa-0.88□□□□□ -2.55
PTPN4-205ENST00000433888 NDUFA1O15239 70 aa-0.89□□□□□ -2.55
PTPN4-205ENST00000433888 DEFB4AO15263 64 aa-0.89□□□□□ -2.55
PTPN4-205ENST00000433888 DNAH12Q6ZR08 3092 aa-0.89□□□□□ -2.55
PTPN4-205ENST00000433888 ASPMQ8IZT6 3477 aa-0.89□□□□□ -2.55
PTPN4-205ENST00000433888 SNRPGP15A8MWD9 76 aa-0.91□□□□□ -2.56
PTPN4-205ENST00000433888 CENPFP49454 3210 aa-0.92□□□□□ -2.56
PTPN4-205ENST00000433888 XIRP2A4UGR9 3374 aa-0.93□□□□□ -2.56
PTPN4-205ENST00000433888 VCANP13611 3396 aa-0.93□□□□□ -2.56
PTPN4-205ENST00000433888 TRPM2O94759 1503 aa-0.94□□□□□ -2.56
PTPN4-205ENST00000433888 MT1FP04733 61 aa-0.95□□□□□ -2.56
PTPN4-205ENST00000433888 CDH23Q9H251 3354 aa-0.96□□□□□ -2.56
PTPN4-205ENST00000433888 CEP250Q9BV73 2442 aa-0.96□□□□□ -2.56
PTPN4-205ENST00000433888 BRCA2P51587 3418 aa-0.97□□□□□ -2.56
PTPN4-205ENST00000433888 VPS13AQ96RL7 3174 aa-0.97□□□□□ -2.57
PTPN4-205ENST00000433888 DEFB136Q30KP8 78 aa-1□□□□□ -2.57
PTPN4-205ENST00000433888 TOMM7Q9P0U1 55 aa-1.01□□□□□ -2.57
PTPN4-205ENST00000433888 TOMM5Q8N4H5 51 aa-1.03□□□□□ -2.57
PTPN4-205ENST00000433888 RPS29P62273 56 aaKnown RBP-1.05□□□□□ -2.58
PTPN4-205ENST00000433888 IQGAP2Q13576 1575 aa-1.08□□□□□ -2.58
PTPN4-205ENST00000433888 UTRNP46939 3433 aa-1.09□□□□□ -2.58
PTPN4-205ENST00000433888 RPL39P62891 51 aaKnown RBP-1.09□□□□□ -2.58
PTPN4-205ENST00000433888 KRTAP19-2Q3LHN2 52 aa-1.11□□□□□ -2.59
PTPN4-205ENST00000433888 GOLGB1Q14789 3259 aaKnown RBP-1.16□□□□□ -2.6
PTPN4-205ENST00000433888 RPL39LQ96EH5 51 aaKnown RBP-1.17□□□□□ -2.6
PTPN4-205ENST00000433888 A0A096LNI7 61 aa-1.19□□□□□ -2.6
PTPN4-205ENST00000433888 LINC01590Q5TEZ4 76 aa-1.19□□□□□ -2.6
PTPN4-205ENST00000433888 DUOX1Q9NRD9 1551 aa-1.19□□□□□ -2.6
PTPN4-205ENST00000433888 DEFB104AQ8WTQ1 72 aa-1.2□□□□□ -2.6
PTPN4-205ENST00000433888 SAMD9LQ8IVG5 1584 aa-1.21□□□□□ -2.6
PTPN4-205ENST00000433888 ATP7AQ04656 1500 aa-1.22□□□□□ -2.6
PTPN4-205ENST00000433888 RHPN1-AS1Q9BWJ2 59 aa-1.24□□□□□ -2.61
PTPN4-205ENST00000433888 HTN1P15515 57 aa-1.29□□□□□ -2.62
PTPN4-205ENST00000433888 TTTY10Q9BZA0 68 aa-1.3□□□□□ -2.62
PTPN4-205ENST00000433888 DEFB133Q30KQ1 61 aa-1.31□□□□□ -2.62
PTPN4-205ENST00000433888 TOP2AP11388 1531 aaKnown RBP-1.32□□□□□ -2.62
PTPN4-205ENST00000433888 MROH2BQ7Z745 1585 aa-1.37□□□□□ -2.63
PTPN4-205ENST00000433888 DEFB124Q8NES8 71 aa-1.41□□□□□ -2.64
PTPN4-205ENST00000433888 CD52P31358 61 aa-1.47□□□□□ -2.64
PTPN4-205ENST00000433888 SNRPGP62308 76 aaKnown RBP-1.51□□□□□ -2.65
PTPN4-205ENST00000433888 LINC01556Q5JQF7 62 aa-1.52□□□□□ -2.65
PTPN4-205ENST00000433888 GCC2Q8IWJ2 1684 aa-1.55□□□□□ -2.66
PTPN4-205ENST00000433888 K7EIM0 57 aa-1.58□□□□□ -2.66
PTPN4-205ENST00000433888 ARHGAP5-AS1Q96IT6 56 aa-1.58□□□□□ -2.66
PTPN4-205ENST00000433888 H3BUX3 64 aa-1.62□□□□□ -2.67
PTPN4-205ENST00000433888 PRCDQ00LT1 54 aa-1.64□□□□□ -2.67
PTPN4-205ENST00000433888 A0A096LPF7 62 aa-1.65□□□□□ -2.67
PTPN4-205ENST00000433888 APELAP0DMC3 54 aa-1.66□□□□□ -2.68
PTPN4-205ENST00000433888 H3BSH0 61 aa-1.69□□□□□ -2.68
PTPN4-205ENST00000433888 HTN3P15516 51 aa-1.76□□□□□ -2.69
PTPN4-205ENST00000433888 TMEM167AQ8TBQ9 72 aa-1.79□□□□□ -2.7
PTPN4-205ENST00000433888 RPL39P5Q59GN2 51 aa-1.83□□□□□ -2.7
PTPN4-205ENST00000433888 DEFB108AA8MXU0 73 aa-1.86□□□□□ -2.71
PTPN4-205ENST00000433888 Q9Y3F1 56 aa-1.92□□□□□ -2.72
PTPN4-205ENST00000433888 DEFB108BQ8NET1 73 aa-1.96□□□□□ -2.72
PTPN4-205ENST00000433888 COX14Q96I36 57 aa-1.97□□□□□ -2.72
PTPN4-205ENST00000433888 STATHP02808 62 aa-2.12□□□□□ -2.75
Retrieved 78 of 20,778 RNA–protein pairs in 138.9 ms