RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 A0A096LNI7 61 aa1.96□□□□□ -2.1
CNGA1-203ENST00000420489 SPRR1BP22528 89 aa1.96□□□□□ -2.1
CNGA1-203ENST00000420489 COX6B2Q6YFQ2 88 aa1.95□□□□□ -2.1
CNGA1-203ENST00000420489 HRES1P13985 223 aa1.95□□□□□ -2.1
CNGA1-203ENST00000420489 KRTAP4-3Q9BYR4 195 aa1.95□□□□□ -2.1
CNGA1-203ENST00000420489 MT1FP04733 61 aa1.94□□□□□ -2.1
CNGA1-203ENST00000420489 RPS29P62273 56 aaKnown RBP1.94□□□□□ -2.1
CNGA1-203ENST00000420489 SPATA8Q6RVD6 105 aa1.93□□□□□ -2.1
CNGA1-203ENST00000420489 MRPL34Q9BQ48 92 aaKnown RBP1.93□□□□□ -2.1
CNGA1-203ENST00000420489 ACYP2P14621 99 aa1.93□□□□□ -2.1
CNGA1-203ENST00000420489 KRTAP5-2Q701N4 177 aa1.92□□□□□ -2.1
CNGA1-203ENST00000420489 MUC5ACP98088 5654 aa1.92□□□□□ -2.1
CNGA1-203ENST00000420489 A0A1B0GU69 56 aa1.92□□□□□ -2.1
CNGA1-203ENST00000420489 UQCR11O14957 56 aa1.92□□□□□ -2.1
CNGA1-203ENST00000420489 Q96NJ1 140 aa1.91□□□□□ -2.1
CNGA1-203ENST00000420489 ZNF861PO60384 105 aa1.91□□□□□ -2.1
CNGA1-203ENST00000420489 LINC00304Q8N9R0 145 aa1.91□□□□□ -2.1
CNGA1-203ENST00000420489 KRTAP12-2P59991 146 aa1.9□□□□□ -2.11
CNGA1-203ENST00000420489 KRTAP10-10P60014 251 aa1.89□□□□□ -2.11
CNGA1-203ENST00000420489 SPINT4Q6UDR6 99 aa1.89□□□□□ -2.11
CNGA1-203ENST00000420489 KRTAP13-1Q8IUC0 172 aa1.89□□□□□ -2.11
CNGA1-203ENST00000420489 R4GN34 69 aa1.89□□□□□ -2.11
CNGA1-203ENST00000420489 KRTAP5-8O75690 187 aa1.89□□□□□ -2.11
CNGA1-203ENST00000420489 PRO2289Q9P1D8 64 aa1.89□□□□□ -2.11
CNGA1-203ENST00000420489 SPRR2FQ96RM1 72 aa1.88□□□□□ -2.11
CNGA1-203ENST00000420489 LCE3AQ5TA76 89 aa1.88□□□□□ -2.11
CNGA1-203ENST00000420489 KRTAP13-2Q52LG2 175 aa1.85□□□□□ -2.11
CNGA1-203ENST00000420489 ANAPC11Q9NYG5 84 aa1.84□□□□□ -2.11
CNGA1-203ENST00000420489 LCE3EQ5T5B0 92 aa1.83□□□□□ -2.12
CNGA1-203ENST00000420489 SSBP3-AS1Q7Z2R9 100 aa1.82□□□□□ -2.12
CNGA1-203ENST00000420489 SPINK1P00995 79 aa1.82□□□□□ -2.12
CNGA1-203ENST00000420489 H0YAA0 97 aa1.77□□□□□ -2.13
CNGA1-203ENST00000420489 H1FX-AS1Q4G0G2 97 aa1.75□□□□□ -2.13
CNGA1-203ENST00000420489 RPL37P61927 97 aaKnown RBP1.75□□□□□ -2.13
CNGA1-203ENST00000420489 KRTAP8-1Q8IUC2 63 aa1.74□□□□□ -2.13
CNGA1-203ENST00000420489 C9orf92A6NGG3 77 aa1.73□□□□□ -2.13
CNGA1-203ENST00000420489 KRTAP19-8Q3LI54 63 aa1.72□□□□□ -2.13
CNGA1-203ENST00000420489 CRIPTQ9P021 101 aa1.72□□□□□ -2.13
CNGA1-203ENST00000420489 INE1O15225 51 aa1.7□□□□□ -2.14
CNGA1-203ENST00000420489 LCE1CQ5T751 118 aa1.7□□□□□ -2.14
CNGA1-203ENST00000420489 LCE1BQ5T7P3 118 aa1.7□□□□□ -2.14
CNGA1-203ENST00000420489 MT4P47944 62 aa1.68□□□□□ -2.14
CNGA1-203ENST00000420489 A0A0D9SG42 100 aa1.68□□□□□ -2.14
CNGA1-203ENST00000420489 PLAC4Q8WY50 150 aa1.66□□□□□ -2.14
CNGA1-203ENST00000420489 OBSCNQ5VST9 7968 aa1.66□□□□□ -2.14
CNGA1-203ENST00000420489 MT1BP07438 61 aa1.66□□□□□ -2.14
CNGA1-203ENST00000420489 C10orf95Q9H7T3 257 aa1.64□□□□□ -2.15
CNGA1-203ENST00000420489 KRTAP13-4Q3LI77 160 aa1.63□□□□□ -2.15
CNGA1-203ENST00000420489 S4R3F8 94 aa1.63□□□□□ -2.15
CNGA1-203ENST00000420489 KRTAP20-2Q3LI61 65 aa1.62□□□□□ -2.15
CNGA1-203ENST00000420489 DSTQ03001 7570 aaKnown RBP1.61□□□□□ -2.15
CNGA1-203ENST00000420489 M0QZ58 72 aa1.59□□□□□ -2.16
CNGA1-203ENST00000420489 KRTAP12-1P59990 96 aa1.59□□□□□ -2.16
CNGA1-203ENST00000420489 PP632Q6XCG6 107 aa1.58□□□□□ -2.16
CNGA1-203ENST00000420489 SPRR2GQ9BYE4 73 aa1.57□□□□□ -2.16
CNGA1-203ENST00000420489 KRTAP19-3Q7Z4W3 81 aa1.46□□□□□ -2.17
CNGA1-203ENST00000420489 KRTAP12-4P60329 112 aa1.46□□□□□ -2.18
CNGA1-203ENST00000420489 LCE3DQ9BYE3 92 aa1.45□□□□□ -2.18
CNGA1-203ENST00000420489 TNP1P09430 55 aa1.43□□□□□ -2.18
CNGA1-203ENST00000420489 MT1GP13640 62 aa1.42□□□□□ -2.18
CNGA1-203ENST00000420489 MT1XP80297 61 aa1.37□□□□□ -2.19
CNGA1-203ENST00000420489 MT1EP04732 61 aa1.3□□□□□ -2.2
CNGA1-203ENST00000420489 PHGR1C9JFL3 82 aa1.28□□□□□ -2.2
CNGA1-203ENST00000420489 MT1MQ8N339 61 aa1.28□□□□□ -2.2
CNGA1-203ENST00000420489 KRTAP12-3P60328 96 aa1.25□□□□□ -2.21
CNGA1-203ENST00000420489 KRTAP19-7Q3SYF9 63 aa1.23□□□□□ -2.21
CNGA1-203ENST00000420489 KRTAP21-1Q3LI58 79 aa1.17□□□□□ -2.22
CNGA1-203ENST00000420489 KRTAP21-2Q3LI59 83 aa1.17□□□□□ -2.22
CNGA1-203ENST00000420489 SYNE1Q8NF91 8797 aaKnown RBP1.16□□□□□ -2.22
CNGA1-203ENST00000420489 MUC19Q7Z5P9 8384 aa1.15□□□□□ -2.23
CNGA1-203ENST00000420489 KRTAP19-5Q3LI72 72 aa1.15□□□□□ -2.23
CNGA1-203ENST00000420489 MT1LQ93083 61 aa1.13□□□□□ -2.23
CNGA1-203ENST00000420489 MT1AP04731 61 aa1.03□□□□□ -2.24
CNGA1-203ENST00000420489 KRTAP6-2Q3LI66 62 aa0.99□□□□□ -2.25
CNGA1-203ENST00000420489 KRTAP6-1Q3LI64 71 aa0.96□□□□□ -2.26
CNGA1-203ENST00000420489 PRM1P04553 51 aa0.93□□□□□ -2.26
CNGA1-203ENST00000420489 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 9.3 ms