RNA–Protein interactions for RNA: ENST00000393330.6

TSPAN8-202, Transcript of tetraspanin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN8, Length 1,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-202ENST00000393330 KRTAP13-3Q3SY46 172 aa2.68□□□□□ -1.98
TSPAN8-202ENST00000393330 H1FX-AS1Q4G0G2 97 aa2.68□□□□□ -1.98
TSPAN8-202ENST00000393330 SPRR1AP35321 89 aa2.67□□□□□ -1.98
TSPAN8-202ENST00000393330 COX6B2Q6YFQ2 88 aa2.67□□□□□ -1.98
TSPAN8-202ENST00000393330 C10orf95Q9H7T3 257 aa2.66□□□□□ -1.98
TSPAN8-202ENST00000393330 MDN1Q9NU22 5596 aa2.66□□□□□ -1.98
TSPAN8-202ENST00000393330 PRLHP81277 87 aa2.65□□□□□ -1.99
TSPAN8-202ENST00000393330 INE1O15225 51 aa2.64□□□□□ -1.99
TSPAN8-202ENST00000393330 KRTAP19-6Q3LI70 58 aa2.63□□□□□ -1.99
TSPAN8-202ENST00000393330 RPL37P61927 97 aaKnown RBP2.62□□□□□ -1.99
TSPAN8-202ENST00000393330 SPINK1P00995 79 aa2.61□□□□□ -1.99
TSPAN8-202ENST00000393330 LCE3EQ5T5B0 92 aa2.61□□□□□ -1.99
TSPAN8-202ENST00000393330 FLGP20930 4061 aaPredicted RBP2.59□□□□□ -1.99
TSPAN8-202ENST00000393330 RPS29P62273 56 aaKnown RBP2.59□□□□□ -1.99
TSPAN8-202ENST00000393330 SPRR1BP22528 89 aa2.58□□□□□ -2
TSPAN8-202ENST00000393330 KRTAP2-1Q9BYU5 128 aa2.58□□□□□ -2
TSPAN8-202ENST00000393330 KRTAP12-2P59991 146 aa2.55□□□□□ -2
TSPAN8-202ENST00000393330 KRTAP5-2Q701N4 177 aa2.51□□□□□ -2.01
TSPAN8-202ENST00000393330 C9orf92A6NGG3 77 aa2.47□□□□□ -2.01
TSPAN8-202ENST00000393330 MT2AP02795 61 aa2.47□□□□□ -2.01
TSPAN8-202ENST00000393330 KRTAP10-10P60014 251 aa2.47□□□□□ -2.01
TSPAN8-202ENST00000393330 S4R3F8 94 aa2.47□□□□□ -2.01
TSPAN8-202ENST00000393330 PP632Q6XCG6 107 aa2.46□□□□□ -2.02
TSPAN8-202ENST00000393330 MT1FP04733 61 aa2.44□□□□□ -2.02
TSPAN8-202ENST00000393330 LCE3AQ5TA76 89 aa2.42□□□□□ -2.02
TSPAN8-202ENST00000393330 A0A0D9SG42 100 aa2.42□□□□□ -2.02
TSPAN8-202ENST00000393330 OBSCNQ5VST9 7968 aa2.41□□□□□ -2.02
TSPAN8-202ENST00000393330 KRTAP4-3Q9BYR4 195 aa2.41□□□□□ -2.02
TSPAN8-202ENST00000393330 SPRR2EP22531 72 aa2.38□□□□□ -2.03
TSPAN8-202ENST00000393330 SPRR2BP35325 72 aa2.38□□□□□ -2.03
TSPAN8-202ENST00000393330 SPRR2AP35326 72 aa2.38□□□□□ -2.03
TSPAN8-202ENST00000393330 SPRR5A0A1B0GTR4 108 aa2.37□□□□□ -2.03
TSPAN8-202ENST00000393330 KRTAP13-4Q3LI77 160 aa2.36□□□□□ -2.03
TSPAN8-202ENST00000393330 AHNAK2Q8IVF2 5795 aa2.34□□□□□ -2.03
TSPAN8-202ENST00000393330 KRTAP12-1P59990 96 aa2.33□□□□□ -2.04
TSPAN8-202ENST00000393330 HMCN1Q96RW7 5635 aa2.33□□□□□ -2.04
TSPAN8-202ENST00000393330 DSTQ03001 7570 aaKnown RBP2.32□□□□□ -2.04
TSPAN8-202ENST00000393330 SPRR2DP22532 72 aa2.32□□□□□ -2.04
TSPAN8-202ENST00000393330 SPRR2FQ96RM1 72 aa2.3□□□□□ -2.04
TSPAN8-202ENST00000393330 KRTAP5-10Q6L8G5 202 aa2.27□□□□□ -2.05
TSPAN8-202ENST00000393330 KRTAP5-7Q6L8G8 165 aa2.27□□□□□ -2.05
TSPAN8-202ENST00000393330 M0QZ58 72 aa2.22□□□□□ -2.05
TSPAN8-202ENST00000393330 KRTAP5-5Q701N2 237 aaPredicted RBP2.19□□□□□ -2.06
TSPAN8-202ENST00000393330 KRTAP5-8O75690 187 aa2.16□□□□□ -2.06
TSPAN8-202ENST00000393330 KRTAP8-1Q8IUC2 63 aa2.14□□□□□ -2.07
TSPAN8-202ENST00000393330 AHNAKQ09666 5890 aaKnown RBP2.13□□□□□ -2.07
TSPAN8-202ENST00000393330 LCE3DQ9BYE3 92 aa2.12□□□□□ -2.07
TSPAN8-202ENST00000393330 MT1BP07438 61 aa2.11□□□□□ -2.07
TSPAN8-202ENST00000393330 KRTAP19-8Q3LI54 63 aa2.09□□□□□ -2.07
TSPAN8-202ENST00000393330 LCE1CQ5T751 118 aa2.09□□□□□ -2.07
TSPAN8-202ENST00000393330 LCE1BQ5T7P3 118 aa2.09□□□□□ -2.07
TSPAN8-202ENST00000393330 SPRR2GQ9BYE4 73 aa2.09□□□□□ -2.07
TSPAN8-202ENST00000393330 MT4P47944 62 aa2.05□□□□□ -2.08
TSPAN8-202ENST00000393330 MUC5BQ9HC84 5762 aaPredicted RBP2.03□□□□□ -2.08
TSPAN8-202ENST00000393330 MUC5ACP98088 5654 aa2.01□□□□□ -2.09
TSPAN8-202ENST00000393330 TNP1P09430 55 aa2□□□□□ -2.09
TSPAN8-202ENST00000393330 MT1XP80297 61 aa1.94□□□□□ -2.1
TSPAN8-202ENST00000393330 KRTAP12-4P60329 112 aa1.81□□□□□ -2.12
TSPAN8-202ENST00000393330 KRTAP20-2Q3LI61 65 aa1.81□□□□□ -2.12
TSPAN8-202ENST00000393330 KRTAP19-3Q7Z4W3 81 aa1.8□□□□□ -2.12
TSPAN8-202ENST00000393330 KRTAP19-7Q3SYF9 63 aa1.74□□□□□ -2.13
TSPAN8-202ENST00000393330 SYNE1Q8NF91 8797 aaKnown RBP1.73□□□□□ -2.13
TSPAN8-202ENST00000393330 MT1GP13640 62 aa1.72□□□□□ -2.13
TSPAN8-202ENST00000393330 MT1EP04732 61 aa1.71□□□□□ -2.14
TSPAN8-202ENST00000393330 MUC19Q7Z5P9 8384 aa1.71□□□□□ -2.14
TSPAN8-202ENST00000393330 KRTAP12-3P60328 96 aa1.66□□□□□ -2.14
TSPAN8-202ENST00000393330 KRTAP19-5Q3LI72 72 aa1.66□□□□□ -2.14
TSPAN8-202ENST00000393330 MT1MQ8N339 61 aa1.64□□□□□ -2.15
TSPAN8-202ENST00000393330 MT1LQ93083 61 aa1.63□□□□□ -2.15
TSPAN8-202ENST00000393330 PRM1P04553 51 aa1.53□□□□□ -2.16
TSPAN8-202ENST00000393330 KRTAP21-2Q3LI59 83 aa1.49□□□□□ -2.17
TSPAN8-202ENST00000393330 MT1AP04731 61 aa1.38□□□□□ -2.19
TSPAN8-202ENST00000393330 KRTAP6-1Q3LI64 71 aa1.38□□□□□ -2.19
TSPAN8-202ENST00000393330 PHGR1C9JFL3 82 aa1.35□□□□□ -2.19
TSPAN8-202ENST00000393330 KRTAP6-2Q3LI66 62 aa1.35□□□□□ -2.19
TSPAN8-202ENST00000393330 KRTAP21-1Q3LI58 79 aa1.07□□□□□ -2.24
TSPAN8-202ENST00000393330 MUC16Q8WXI7 14507 aa0.76□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 168.7 ms