RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 LINC01549A6NIU2 74 aa-6.58□□□□□ -3.46
SNORA40.4-201ENST00000390971 DEFB133Q30KQ1 61 aa-6.6□□□□□ -3.47
SNORA40.4-201ENST00000390971 IQGAP3Q86VI3 1631 aa-6.61□□□□□ -3.47
SNORA40.4-201ENST00000390971 MROH2AA6NES4 1674 aa-6.65□□□□□ -3.47
SNORA40.4-201ENST00000390971 EFCAB6Q5THR3 1501 aa-6.65□□□□□ -3.47
SNORA40.4-201ENST00000390971 SERF2P84101 59 aa-6.65□□□□□ -3.47
SNORA40.4-201ENST00000390971 DUOX2Q9NRD8 1548 aa-6.69□□□□□ -3.48
SNORA40.4-201ENST00000390971 ABCA6Q8N139 1617 aa-6.73□□□□□ -3.49
SNORA40.4-201ENST00000390971 UGGT2Q9NYU1 1516 aa-6.74□□□□□ -3.49
SNORA40.4-201ENST00000390971 CD52P31358 61 aa-6.77□□□□□ -3.49
SNORA40.4-201ENST00000390971 HTN1P15515 57 aa-6.84□□□□□ -3.5
SNORA40.4-201ENST00000390971 RHPN1-AS1Q9BWJ2 59 aa-6.84□□□□□ -3.5
SNORA40.4-201ENST00000390971 IGIPA6NJ69 53 aa-6.86□□□□□ -3.51
SNORA40.4-201ENST00000390971 SMIM2Q9BVW6 85 aa-6.86□□□□□ -3.51
SNORA40.4-201ENST00000390971 SYCP2Q9BX26 1530 aa-6.88□□□□□ -3.51
SNORA40.4-201ENST00000390971 A0A096LNI7 61 aa-6.95□□□□□ -3.52
SNORA40.4-201ENST00000390971 TFF3Q07654 80 aa-6.95□□□□□ -3.52
SNORA40.4-201ENST00000390971 S100ZQ8WXG8 99 aa-7.03□□□□□ -3.53
SNORA40.4-201ENST00000390971 H0YGX0 51 aa-7.05□□□□□ -3.54
SNORA40.4-201ENST00000390971 SMCO4Q9NRQ5 59 aa-7.06□□□□□ -3.54
SNORA40.4-201ENST00000390971 DDX60Q8IY21 1712 aaKnown RBP-7.07□□□□□ -3.54
SNORA40.4-201ENST00000390971 UTRNP46939 3433 aa-7.08□□□□□ -3.54
SNORA40.4-201ENST00000390971 PDCD5O14737 125 aa-7.08□□□□□ -3.54
SNORA40.4-201ENST00000390971 UGGT1Q9NYU2 1555 aa-7.11□□□□□ -3.55
SNORA40.4-201ENST00000390971 LINC01590Q5TEZ4 76 aa-7.14□□□□□ -3.55
SNORA40.4-201ENST00000390971 AGLP35573 1532 aa-7.15□□□□□ -3.55
SNORA40.4-201ENST00000390971 TOMM7Q9P0U1 55 aa-7.2□□□□□ -3.56
SNORA40.4-201ENST00000390971 CLTCL1P53675 1640 aa-7.27□□□□□ -3.57
SNORA40.4-201ENST00000390971 DEFB124Q8NES8 71 aa-7.3□□□□□ -3.58
SNORA40.4-201ENST00000390971 EFCAB5A4FU69 1503 aa-7.32□□□□□ -3.58
SNORA40.4-201ENST00000390971 NFAT5O94916 1531 aa-7.32□□□□□ -3.58
SNORA40.4-201ENST00000390971 TRPM2O94759 1503 aa-7.33□□□□□ -3.58
SNORA40.4-201ENST00000390971 PLNP26678 52 aa-7.38□□□□□ -3.59
SNORA40.4-201ENST00000390971 PRXQ9BXM0 1461 aa-7.44□□□□□ -3.6
SNORA40.4-201ENST00000390971 ADCY10Q96PN6 1610 aa-7.45□□□□□ -3.6
SNORA40.4-201ENST00000390971 CPS1P31327 1500 aa-7.46□□□□□ -3.6
SNORA40.4-201ENST00000390971 ABCA10Q8WWZ4 1543 aa-7.47□□□□□ -3.6
SNORA40.4-201ENST00000390971 LINC01556Q5JQF7 62 aa-7.47□□□□□ -3.61
SNORA40.4-201ENST00000390971 ABCA5Q8WWZ7 1642 aa-7.53□□□□□ -3.62
SNORA40.4-201ENST00000390971 DEFB104AQ8WTQ1 72 aa-7.57□□□□□ -3.62
SNORA40.4-201ENST00000390971 NDUFA1O15239 70 aa-7.61□□□□□ -3.63
SNORA40.4-201ENST00000390971 IQGAP1P46940 1657 aa-7.62□□□□□ -3.63
SNORA40.4-201ENST00000390971 A0A087WWC5 75 aa-7.63□□□□□ -3.63
SNORA40.4-201ENST00000390971 DUOX1Q9NRD9 1551 aa-7.71□□□□□ -3.64
SNORA40.4-201ENST00000390971 GOLGB1Q14789 3259 aaKnown RBP-7.72□□□□□ -3.65
SNORA40.4-201ENST00000390971 TOP2AP11388 1531 aaKnown RBP-7.88□□□□□ -3.67
SNORA40.4-201ENST00000390971 ERICH3Q5RHP9 1530 aa-7.91□□□□□ -3.68
SNORA40.4-201ENST00000390971 SMIM5Q71RC9 77 aa-7.94□□□□□ -3.68
SNORA40.4-201ENST00000390971 RPL39P62891 51 aaKnown RBP-8□□□□□ -3.69
SNORA40.4-201ENST00000390971 FANCD2Q9BXW9 1451 aa-8.06□□□□□ -3.7
SNORA40.4-201ENST00000390971 ABCC8Q09428 1581 aa-8.1□□□□□ -3.71
SNORA40.4-201ENST00000390971 SAMD9LQ8IVG5 1584 aa-8.12□□□□□ -3.71
SNORA40.4-201ENST00000390971 H3BUX3 64 aa-8.13□□□□□ -3.71
SNORA40.4-201ENST00000390971 CMC2Q9NRP2 79 aa-8.16□□□□□ -3.72
SNORA40.4-201ENST00000390971 ATP7AQ04656 1500 aa-8.19□□□□□ -3.72
SNORA40.4-201ENST00000390971 APELAP0DMC3 54 aa-8.2□□□□□ -3.72
SNORA40.4-201ENST00000390971 RPL39LQ96EH5 51 aaKnown RBP-8.21□□□□□ -3.72
SNORA40.4-201ENST00000390971 A0A096LPF7 62 aa-8.31□□□□□ -3.74
SNORA40.4-201ENST00000390971 MROH2BQ7Z745 1585 aa-8.43□□□□□ -3.76
SNORA40.4-201ENST00000390971 HTN3P15516 51 aa-8.52□□□□□ -3.77
SNORA40.4-201ENST00000390971 K7EIM0 57 aa-8.79□□□□□ -3.82
SNORA40.4-201ENST00000390971 PRCDQ00LT1 54 aa-8.86□□□□□ -3.83
SNORA40.4-201ENST00000390971 TMEM167AQ8TBQ9 72 aa-8.95□□□□□ -3.84
SNORA40.4-201ENST00000390971 ARHGAP5-AS1Q96IT6 56 aa-9.03□□□□□ -3.85
SNORA40.4-201ENST00000390971 H3BSH0 61 aa-9.1□□□□□ -3.87
SNORA40.4-201ENST00000390971 SMIM31A0A1B0GVY4 71 aa-9.11□□□□□ -3.87
SNORA40.4-201ENST00000390971 SNRPGP15A8MWD9 76 aa-9.14□□□□□ -3.87
SNORA40.4-201ENST00000390971 IQGAP2Q13576 1575 aa-9.18□□□□□ -3.88
SNORA40.4-201ENST00000390971 Q9Y3F1 56 aa-9.3□□□□□ -3.9
SNORA40.4-201ENST00000390971 TOMM5Q8N4H5 51 aa-9.58□□□□□ -3.94
SNORA40.4-201ENST00000390971 COX14Q96I36 57 aa-9.65□□□□□ -3.95
SNORA40.4-201ENST00000390971 RPL39P5Q59GN2 51 aa-9.68□□□□□ -3.96
SNORA40.4-201ENST00000390971 DEFB108AA8MXU0 73 aa-9.76□□□□□ -3.97
SNORA40.4-201ENST00000390971 SNRPGP62308 76 aaKnown RBP-9.76□□□□□ -3.97
SNORA40.4-201ENST00000390971 DEFB108BQ8NET1 73 aa-10.05□□□□□ -4.02
SNORA40.4-201ENST00000390971 GCC2Q8IWJ2 1684 aa-10.14□□□□□ -4.03
SNORA40.4-201ENST00000390971 STATHP02808 62 aa-10.45□□□□□ -4.08
Retrieved 77 of 20,778 RNA–protein pairs in 154.5 ms