RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 NOP10Q9NPE3 64 aaKnown RBP1.6□□□□□ -2.15
ECHDC1-205ENST00000368295 I3L2K1 104 aa1.59□□□□□ -2.15
ECHDC1-205ENST00000368295 MT2AP02795 61 aa1.59□□□□□ -2.15
ECHDC1-205ENST00000368295 PIGYQ3MUY2 71 aa1.59□□□□□ -2.15
ECHDC1-205ENST00000368295 HTN1P15515 57 aa1.59□□□□□ -2.16
ECHDC1-205ENST00000368295 ARHGAP5-AS1Q96IT6 56 aa1.59□□□□□ -2.16
ECHDC1-205ENST00000368295 AHNAKQ09666 5890 aaKnown RBP1.58□□□□□ -2.16
ECHDC1-205ENST00000368295 SPRR2DP22532 72 aa1.58□□□□□ -2.16
ECHDC1-205ENST00000368295 TTTY10Q9BZA0 68 aa1.57□□□□□ -2.16
ECHDC1-205ENST00000368295 C6orf48Q9UBA6 75 aa1.57□□□□□ -2.16
ECHDC1-205ENST00000368295 H3BNG1 76 aa1.56□□□□□ -2.16
ECHDC1-205ENST00000368295 H0YAA0 97 aa1.54□□□□□ -2.16
ECHDC1-205ENST00000368295 LINC01556Q5JQF7 62 aa1.54□□□□□ -2.16
ECHDC1-205ENST00000368295 POLR2KP53803 58 aaKnown RBP1.54□□□□□ -2.16
ECHDC1-205ENST00000368295 KRTAP10-10P60014 251 aa1.54□□□□□ -2.16
ECHDC1-205ENST00000368295 SPRR2FQ96RM1 72 aa1.54□□□□□ -2.16
ECHDC1-205ENST00000368295 COX6A2Q02221 97 aa1.53□□□□□ -2.16
ECHDC1-205ENST00000368295 PCOTHQ58A44 107 aa1.53□□□□□ -2.16
ECHDC1-205ENST00000368295 LINC01590Q5TEZ4 76 aa1.52□□□□□ -2.17
ECHDC1-205ENST00000368295 TMEM167AQ8TBQ9 72 aa1.52□□□□□ -2.17
ECHDC1-205ENST00000368295 IGLV5-48A0A075B6I7 105 aa1.51□□□□□ -2.17
ECHDC1-205ENST00000368295 K7EIM0 57 aa1.5□□□□□ -2.17
ECHDC1-205ENST00000368295 KLK9Q2XQG4 91 aa1.5□□□□□ -2.17
ECHDC1-205ENST00000368295 H1FX-AS1Q4G0G2 97 aa1.48□□□□□ -2.17
ECHDC1-205ENST00000368295 MT4P47944 62 aa1.48□□□□□ -2.17
ECHDC1-205ENST00000368295 WFDC13Q8IUB5 93 aa1.48□□□□□ -2.17
ECHDC1-205ENST00000368295 PRO0255Q9UI72 69 aa1.48□□□□□ -2.17
ECHDC1-205ENST00000368295 RPL39P62891 51 aaKnown RBP1.47□□□□□ -2.17
ECHDC1-205ENST00000368295 C10orf95Q9H7T3 257 aa1.47□□□□□ -2.17
ECHDC1-205ENST00000368295 A0A096LNI7 61 aa1.47□□□□□ -2.17
ECHDC1-205ENST00000368295 WT1-ASQ06250 92 aa1.47□□□□□ -2.17
ECHDC1-205ENST00000368295 PRCDQ00LT1 54 aa1.46□□□□□ -2.18
ECHDC1-205ENST00000368295 MUC5ACP98088 5654 aa1.45□□□□□ -2.18
ECHDC1-205ENST00000368295 RPL39LQ96EH5 51 aaKnown RBP1.45□□□□□ -2.18
ECHDC1-205ENST00000368295 A8MTW9 85 aa1.45□□□□□ -2.18
ECHDC1-205ENST00000368295 SPRR1AP35321 89 aa1.44□□□□□ -2.18
ECHDC1-205ENST00000368295 KRTAP12-1P59990 96 aa1.43□□□□□ -2.18
ECHDC1-205ENST00000368295 CLPSL2Q6UWE3 100 aa1.42□□□□□ -2.18
ECHDC1-205ENST00000368295 DEFB105AQ8NG35 78 aa1.42□□□□□ -2.18
ECHDC1-205ENST00000368295 MMP24-AS1A0A0U1RRL7 71 aa1.41□□□□□ -2.18
ECHDC1-205ENST00000368295 MUC19Q7Z5P9 8384 aa1.4□□□□□ -2.19
ECHDC1-205ENST00000368295 LCE3DQ9BYE3 92 aa1.39□□□□□ -2.19
ECHDC1-205ENST00000368295 M0QY20 66 aa1.39□□□□□ -2.19
ECHDC1-205ENST00000368295 SPRR1BP22528 89 aa1.38□□□□□ -2.19
ECHDC1-205ENST00000368295 KRTAP13-1Q8IUC0 172 aa1.38□□□□□ -2.19
ECHDC1-205ENST00000368295 C9orf92A6NGG3 77 aa1.36□□□□□ -2.19
ECHDC1-205ENST00000368295 KRTAP12-4P60329 112 aa1.35□□□□□ -2.19
ECHDC1-205ENST00000368295 KRTAP8-1Q8IUC2 63 aa1.34□□□□□ -2.2
ECHDC1-205ENST00000368295 S4R3F8 94 aa1.34□□□□□ -2.2
ECHDC1-205ENST00000368295 PRLHP81277 87 aa1.33□□□□□ -2.2
ECHDC1-205ENST00000368295 MT1BP07438 61 aa1.31□□□□□ -2.2
ECHDC1-205ENST00000368295 A0A0D9SG42 100 aa1.3□□□□□ -2.2
ECHDC1-205ENST00000368295 TOMM7Q9P0U1 55 aa1.3□□□□□ -2.2
ECHDC1-205ENST00000368295 SPINK1P00995 79 aa1.22□□□□□ -2.21
ECHDC1-205ENST00000368295 KRTAP20-2Q3LI61 65 aa1.2□□□□□ -2.22
ECHDC1-205ENST00000368295 KRTAP21-2Q3LI59 83 aa1.18□□□□□ -2.22
ECHDC1-205ENST00000368295 M0QZ58 72 aa1.17□□□□□ -2.22
ECHDC1-205ENST00000368295 KRTAP12-3P60328 96 aa1.17□□□□□ -2.22
ECHDC1-205ENST00000368295 KRTAP19-8Q3LI54 63 aa1.16□□□□□ -2.22
ECHDC1-205ENST00000368295 SYNE1Q8NF91 8797 aaKnown RBP1.15□□□□□ -2.23
ECHDC1-205ENST00000368295 RPS29P62273 56 aaKnown RBP1.13□□□□□ -2.23
ECHDC1-205ENST00000368295 MT1XP80297 61 aa1.1□□□□□ -2.23
ECHDC1-205ENST00000368295 SPRR2GQ9BYE4 73 aa1.08□□□□□ -2.24
ECHDC1-205ENST00000368295 KRTAP19-3Q7Z4W3 81 aa1.07□□□□□ -2.24
ECHDC1-205ENST00000368295 TNP1P09430 55 aa1.05□□□□□ -2.24
ECHDC1-205ENST00000368295 MT1EP04732 61 aa1.01□□□□□ -2.25
ECHDC1-205ENST00000368295 PHGR1C9JFL3 82 aa1□□□□□ -2.25
ECHDC1-205ENST00000368295 MT1MQ8N339 61 aa0.99□□□□□ -2.25
ECHDC1-205ENST00000368295 KRTAP19-7Q3SYF9 63 aa0.99□□□□□ -2.25
ECHDC1-205ENST00000368295 MT1GP13640 62 aa0.95□□□□□ -2.26
ECHDC1-205ENST00000368295 PRM1P04553 51 aa0.88□□□□□ -2.27
ECHDC1-205ENST00000368295 MT1LQ93083 61 aa0.87□□□□□ -2.27
ECHDC1-205ENST00000368295 KRTAP6-2Q3LI66 62 aa0.85□□□□□ -2.27
ECHDC1-205ENST00000368295 KRTAP19-5Q3LI72 72 aa0.85□□□□□ -2.27
ECHDC1-205ENST00000368295 KRTAP6-1Q3LI64 71 aa0.79□□□□□ -2.28
ECHDC1-205ENST00000368295 MT1AP04731 61 aa0.77□□□□□ -2.29
ECHDC1-205ENST00000368295 KRTAP21-1Q3LI58 79 aa0.72□□□□□ -2.29
ECHDC1-205ENST00000368295 MUC16Q8WXI7 14507 aa0.53□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 8.8 ms